RNA–Protein interactions for RNA: ENST00000394752.7

SFMBT1-201, Transcript of Scm like with four mbt domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFMBT1, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-201ENST00000394752 PSG3Q16557 428 aa11.69□□□□□ -0.54
SFMBT1-201ENST00000394752 LINC00311Q8N616 119 aa11.69□□□□□ -0.54
SFMBT1-201ENST00000394752 SHANK2-AS3Q9BTD1 123 aa11.69□□□□□ -0.54
SFMBT1-201ENST00000394752 VCANP13611 3396 aa11.69□□□□□ -0.54
SFMBT1-201ENST00000394752 IGLC7A0M8Q6 106 aa11.69□□□□□ -0.54
SFMBT1-201ENST00000394752 G3V318 75 aa11.69□□□□□ -0.54
SFMBT1-201ENST00000394752 H3BVH4 76 aa11.69□□□□□ -0.54
SFMBT1-201ENST00000394752 TGFAP01135 160 aa11.69□□□□□ -0.54
SFMBT1-201ENST00000394752 IFI27L1Q96BM0 104 aa11.69□□□□□ -0.54
SFMBT1-201ENST00000394752 A0A087X0K7 114 aa11.69□□□□□ -0.54
SFMBT1-201ENST00000394752 SH2D1AO60880 128 aa11.69□□□□□ -0.54
SFMBT1-201ENST00000394752 SAA4P35542 130 aa11.69□□□□□ -0.54
SFMBT1-201ENST00000394752 PCP4P48539 62 aa11.69□□□□□ -0.54
SFMBT1-201ENST00000394752 PSMB2P49721 201 aa11.69□□□□□ -0.54
SFMBT1-201ENST00000394752 MRPL36Q9P0J6 103 aaKnown RBP11.69□□□□□ -0.54
SFMBT1-201ENST00000394752 SYS1-DBNDD2H3BUS1 97 aa11.68□□□□□ -0.54
SFMBT1-201ENST00000394752 IGLC1P0CG04 106 aa11.68□□□□□ -0.54
SFMBT1-201ENST00000394752 EIF4EBP1Q13541 118 aaPredicted RBP11.68□□□□□ -0.54
SFMBT1-201ENST00000394752 ZNF56Q15929 161 aa11.68□□□□□ -0.54
SFMBT1-201ENST00000394752 C1orf229Q6ZS94 237 aaPredicted RBP11.68□□□□□ -0.54
SFMBT1-201ENST00000394752 A0A1B0GW15 77 aa11.68□□□□□ -0.54
SFMBT1-201ENST00000394752 ERCC8Q13216 396 aa11.68□□□□□ -0.54
SFMBT1-201ENST00000394752 CHCHD1Q96BP2 118 aaKnown RBP11.68□□□□□ -0.54
SFMBT1-201ENST00000394752 NDUFA3O95167 84 aa11.68□□□□□ -0.54
SFMBT1-201ENST00000394752 RNF5Q99942 180 aa11.68□□□□□ -0.54
SFMBT1-201ENST00000394752 MRPL27Q9P0M9 148 aaKnown RBP11.68□□□□□ -0.54
SFMBT1-201ENST00000394752 OR11H12B2RN74 326 aa11.68□□□□□ -0.54
SFMBT1-201ENST00000394752 RASL11AQ6T310 242 aa11.68□□□□□ -0.54
SFMBT1-201ENST00000394752 PET117Q6UWS5 81 aa11.68□□□□□ -0.54
SFMBT1-201ENST00000394752 OR11H1Q8NG94 326 aa11.68□□□□□ -0.54
SFMBT1-201ENST00000394752 OR11H2Q8NH07 326 aa11.68□□□□□ -0.54
SFMBT1-201ENST00000394752 C8orf49Q96NF6 230 aa11.68□□□□□ -0.54
SFMBT1-201ENST00000394752 DLEU1O43261 78 aa11.67□□□□□ -0.54
SFMBT1-201ENST00000394752 IFI27P40305 119 aaPredicted RBP11.67□□□□□ -0.54
SFMBT1-201ENST00000394752 PAX8Q06710 450 aa11.67□□□□□ -0.54
SFMBT1-201ENST00000394752 ZNF562Q6V9R5 426 aa11.67□□□□□ -0.54
SFMBT1-201ENST00000394752 HIVEP2P31629 2446 aa11.67□□□□□ -0.54
SFMBT1-201ENST00000394752 RNF182Q8N6D2 247 aa11.67□□□□□ -0.54
SFMBT1-201ENST00000394752 H3BUT2 72 aa11.67□□□□□ -0.54
SFMBT1-201ENST00000394752 CGB3P0DN86 165 aa11.67□□□□□ -0.54
SFMBT1-201ENST00000394752 CGB7P0DN87 165 aa11.67□□□□□ -0.54
SFMBT1-201ENST00000394752 ASIPP42127 132 aa11.67□□□□□ -0.54
SFMBT1-201ENST00000394752 MAJINQ3KP22 176 aa11.67□□□□□ -0.54
SFMBT1-201ENST00000394752 SFTA2Q6UW10 78 aa11.67□□□□□ -0.54
SFMBT1-201ENST00000394752 PATE2Q6UY27 113 aa11.67□□□□□ -0.54
SFMBT1-201ENST00000394752 EFNA4P52798 201 aa11.67□□□□□ -0.54
SFMBT1-201ENST00000394752 SCGB3A1Q96QR1 104 aa11.67□□□□□ -0.54
SFMBT1-201ENST00000394752 SLC50A1Q9BRV3 221 aa11.67□□□□□ -0.54
SFMBT1-201ENST00000394752 PEF1Q9UBV8 284 aaKnown RBP11.67□□□□□ -0.54
SFMBT1-201ENST00000394752 TRBV19A0A075B6N1 114 aa11.66□□□□□ -0.54
SFMBT1-201ENST00000394752 PRSS2P07478 247 aa11.66□□□□□ -0.54
SFMBT1-201ENST00000394752 TMEM249Q2WGJ8 235 aa11.66□□□□□ -0.54
SFMBT1-201ENST00000394752 ALKBH7Q9BT30 221 aaPredicted RBP11.66□□□□□ -0.54
SFMBT1-201ENST00000394752 JKAMPQ9P055 326 aa11.66□□□□□ -0.54
SFMBT1-201ENST00000394752 GNLYP22749 145 aa11.66□□□□□ -0.54
SFMBT1-201ENST00000394752 PLP1P60201 277 aa11.66□□□□□ -0.54
SFMBT1-201ENST00000394752 COA6Q5JTJ3 125 aaKnown RBP11.66□□□□□ -0.54
SFMBT1-201ENST00000394752 LURAP1LQ8IV03 231 aa11.66□□□□□ -0.54
SFMBT1-201ENST00000394752 TRAV41A0A0B4J266 112 aa11.65□□□□□ -0.54
SFMBT1-201ENST00000394752 ZNF256Q9Y2P7 627 aaPredicted RBP11.65□□□□□ -0.54
SFMBT1-201ENST00000394752 WDFY4Q6ZS81 3184 aa11.65□□□□□ -0.54
SFMBT1-201ENST00000394752 TMEM170BQ5T4T1 132 aa11.65□□□□□ -0.54
SFMBT1-201ENST00000394752 C20orf144Q9BQM9 153 aa11.65□□□□□ -0.54
SFMBT1-201ENST00000394752 SMIM27A0A1W2PRY6 76 aa11.65□□□□□ -0.54
SFMBT1-201ENST00000394752 H3BUX3 64 aa11.65□□□□□ -0.54
SFMBT1-201ENST00000394752 KIR2DL4Q99706 377 aa11.65□□□□□ -0.54
SFMBT1-201ENST00000394752 COTL1Q14019 142 aa11.65□□□□□ -0.55
SFMBT1-201ENST00000394752 ATP6V0E1O15342 81 aa11.64□□□□□ -0.55
SFMBT1-201ENST00000394752 ST20Q9HBF5 79 aa11.64□□□□□ -0.55
SFMBT1-201ENST00000394752 M0R1W7 72 aa11.64□□□□□ -0.55
SFMBT1-201ENST00000394752 RUSC1-AS1Q66K80 236 aa11.64□□□□□ -0.55
SFMBT1-201ENST00000394752 STPG4Q8N801 248 aa11.64□□□□□ -0.55
SFMBT1-201ENST00000394752 COX6B1P14854 86 aa11.64□□□□□ -0.55
SFMBT1-201ENST00000394752 TMEM75Q8N9X5 138 aa11.64□□□□□ -0.55
SFMBT1-201ENST00000394752 DUX5Q96PT3 197 aa11.64□□□□□ -0.55
SFMBT1-201ENST00000394752 A0A0G2JLM5 398 aa11.63□□□□□ -0.55
SFMBT1-201ENST00000394752 HAX1O00165 279 aa11.63□□□□□ -0.55
SFMBT1-201ENST00000394752 IGLC2P0DOY2 106 aa11.63□□□□□ -0.55
SFMBT1-201ENST00000394752 IGLC3P0DOY3 106 aa11.63□□□□□ -0.55
SFMBT1-201ENST00000394752 C8orf31Q8N9H6 132 aa11.63□□□□□ -0.55
SFMBT1-201ENST00000394752 ATP5LO75964 103 aa11.63□□□□□ -0.55
SFMBT1-201ENST00000394752 CD7P09564 240 aa11.63□□□□□ -0.55
SFMBT1-201ENST00000394752 SIGLEC15Q6ZMC9 328 aa11.63□□□□□ -0.55
SFMBT1-201ENST00000394752 LRRK2Q5S007 2527 aa11.63□□□□□ -0.55
SFMBT1-201ENST00000394752 HLA-DMBP28068 263 aa11.63□□□□□ -0.55
SFMBT1-201ENST00000394752 SNRPD3P62318 126 aaKnown RBP11.63□□□□□ -0.55
SFMBT1-201ENST00000394752 MINOS1Q5TGZ0 78 aa11.63□□□□□ -0.55
SFMBT1-201ENST00000394752 ZC2HC1AQ96GY0 325 aa11.63□□□□□ -0.55
SFMBT1-201ENST00000394752 MINOS1-NBL1R4GNA1 71 aa11.63□□□□□ -0.55
SFMBT1-201ENST00000394752 DSCAML1Q8TD84 2053 aa11.63□□□□□ -0.55
SFMBT1-201ENST00000394752 VPS13AQ96RL7 3174 aa11.63□□□□□ -0.55
SFMBT1-201ENST00000394752 IGLL1P15814 213 aa11.63□□□□□ -0.55
SFMBT1-201ENST00000394752 FAM231DQ6ZW35 169 aa11.63□□□□□ -0.55
SFMBT1-201ENST00000394752 FAM167A-AS1Q96KT0 104 aa11.63□□□□□ -0.55
SFMBT1-201ENST00000394752 NHP2Q9NX24 153 aaKnown RBP11.63□□□□□ -0.55
SFMBT1-201ENST00000394752 ABCA12Q86UK0 2595 aa11.62□□□□□ -0.55
SFMBT1-201ENST00000394752 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.62□□□□□ -0.55
SFMBT1-201ENST00000394752 NPFFO15130 113 aa11.62□□□□□ -0.55
SFMBT1-201ENST00000394752 AMMECR1LQ6DCA0 310 aa11.62□□□□□ -0.55
SFMBT1-201ENST00000394752 THAP8Q8NA92 274 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms