RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 DMRTA1Q5VZB9 504 aa10.53□□□□□ -0.72
GTF2F1-201ENST00000394456 BPESC1Q9GZL8 116 aa10.53□□□□□ -0.72
GTF2F1-201ENST00000394456 LOC389332A0A1B0GUA5 103 aa10.52□□□□□ -0.72
GTF2F1-201ENST00000394456 HAX1O00165 279 aa10.52□□□□□ -0.72
GTF2F1-201ENST00000394456 EFNA4P52798 201 aa10.52□□□□□ -0.72
GTF2F1-201ENST00000394456 IGLV11-55A0A075B6I3 123 aa10.52□□□□□ -0.73
GTF2F1-201ENST00000394456 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.52□□□□□ -0.73
GTF2F1-201ENST00000394456 A0A1B0GUT8 65 aa10.52□□□□□ -0.73
GTF2F1-201ENST00000394456 NDUFA3O95167 84 aa10.52□□□□□ -0.73
GTF2F1-201ENST00000394456 CEACAM3P40198 252 aa10.52□□□□□ -0.73
GTF2F1-201ENST00000394456 TMEM75Q8N9X5 138 aa10.52□□□□□ -0.73
GTF2F1-201ENST00000394456 GFRA4Q9GZZ7 299 aa10.52□□□□□ -0.73
GTF2F1-201ENST00000394456 IGHV3OR16-13A0A075B7E8 117 aa10.51□□□□□ -0.73
GTF2F1-201ENST00000394456 IGHV3-74A0A0B4J1X5 117 aa10.51□□□□□ -0.73
GTF2F1-201ENST00000394456 IGHV3-66A0A0C4DH42 116 aa10.51□□□□□ -0.73
GTF2F1-201ENST00000394456 SERTM2A0A1B0GWG4 89 aa10.51□□□□□ -0.73
GTF2F1-201ENST00000394456 EGR2P11161 476 aaPredicted RBP10.51□□□□□ -0.73
GTF2F1-201ENST00000394456 ZNF80P51504 273 aaPredicted RBP10.51□□□□□ -0.73
GTF2F1-201ENST00000394456 NPBQ8NG41 125 aa10.51□□□□□ -0.73
GTF2F1-201ENST00000394456 ARPC1AQ92747 370 aa10.51□□□□□ -0.73
GTF2F1-201ENST00000394456 VGLL1Q99990 258 aa10.51□□□□□ -0.73
GTF2F1-201ENST00000394456 SMAD5-AS1Q9Y6J3 95 aa10.51□□□□□ -0.73
GTF2F1-201ENST00000394456 SMKR1H3BMG3 65 aa10.5□□□□□ -0.73
GTF2F1-201ENST00000394456 SNAI2O43623 268 aa10.5□□□□□ -0.73
GTF2F1-201ENST00000394456 TCF21O43680 179 aa10.5□□□□□ -0.73
GTF2F1-201ENST00000394456 LYZL1Q6UWQ5 148 aa10.5□□□□□ -0.73
GTF2F1-201ENST00000394456 MRPL52Q86TS9 123 aaKnown RBP10.5□□□□□ -0.73
GTF2F1-201ENST00000394456 KLHDC1Q8N7A1 406 aa10.5□□□□□ -0.73
GTF2F1-201ENST00000394456 NDFIP1Q9BT67 221 aa10.5□□□□□ -0.73
GTF2F1-201ENST00000394456 AMN1Q8IY45 258 aa10.5□□□□□ -0.73
GTF2F1-201ENST00000394456 FAM208BQ5VWN6 2430 aa10.5□□□□□ -0.73
GTF2F1-201ENST00000394456 LINC01548A6NM66 108 aa10.49□□□□□ -0.73
GTF2F1-201ENST00000394456 SH2D1AO60880 128 aa10.49□□□□□ -0.73
GTF2F1-201ENST00000394456 IGHG4P01861 327 aa10.49□□□□□ -0.73
GTF2F1-201ENST00000394456 RNF5Q99942 180 aa10.49□□□□□ -0.73
GTF2F1-201ENST00000394456 ZNF462Q96JM2 2506 aa10.49□□□□□ -0.73
GTF2F1-201ENST00000394456 GAS8-AS1O95177 125 aa10.49□□□□□ -0.73
GTF2F1-201ENST00000394456 IFI27P40305 119 aaPredicted RBP10.49□□□□□ -0.73
GTF2F1-201ENST00000394456 C21orf62Q9NYP8 219 aa10.49□□□□□ -0.73
GTF2F1-201ENST00000394456 ZFP30Q9Y2G7 519 aa10.49□□□□□ -0.73
GTF2F1-201ENST00000394456 SOX21Q9Y651 276 aaPredicted RBP10.49□□□□□ -0.73
GTF2F1-201ENST00000394456 IGHV3-49A0A0A0MS15 119 aa10.49□□□□□ -0.73
GTF2F1-201ENST00000394456 CTSGP08311 255 aa10.49□□□□□ -0.73
GTF2F1-201ENST00000394456 MFAP4P55083 255 aa10.49□□□□□ -0.73
GTF2F1-201ENST00000394456 CHCHD1Q96BP2 118 aaKnown RBP10.49□□□□□ -0.73
GTF2F1-201ENST00000394456 SIRPDQ9H106 197 aa10.49□□□□□ -0.73
GTF2F1-201ENST00000394456 NPIPB5A8MRT5 1133 aa10.48□□□□□ -0.73
GTF2F1-201ENST00000394456 PRAC2D3DTV9 90 aa10.48□□□□□ -0.73
GTF2F1-201ENST00000394456 D6R8Y8 96 aa10.48□□□□□ -0.73
GTF2F1-201ENST00000394456 IGHV4-39P01824 125 aa10.48□□□□□ -0.73
GTF2F1-201ENST00000394456 ERCC8Q13216 396 aa10.48□□□□□ -0.73
GTF2F1-201ENST00000394456 MPV17L2Q567V2 206 aa10.48□□□□□ -0.73
GTF2F1-201ENST00000394456 ZNF575Q86XF7 245 aa10.48□□□□□ -0.73
GTF2F1-201ENST00000394456 MSRB1Q9NZV6 116 aa10.48□□□□□ -0.73
GTF2F1-201ENST00000394456 LRRK2Q5S007 2527 aa10.48□□□□□ -0.73
GTF2F1-201ENST00000394456 A0A096LNJ9 63 aa10.48□□□□□ -0.73
GTF2F1-201ENST00000394456 IGHV7-81A0A0B4J1V7 117 aa10.48□□□□□ -0.73
GTF2F1-201ENST00000394456 LMO4P61968 165 aa10.48□□□□□ -0.73
GTF2F1-201ENST00000394456 ZNF562Q6V9R5 426 aa10.48□□□□□ -0.73
GTF2F1-201ENST00000394456 RNF182Q8N6D2 247 aa10.48□□□□□ -0.73
GTF2F1-201ENST00000394456 IGHV2-70DA0A0C4DH43 119 aa10.47□□□□□ -0.73
GTF2F1-201ENST00000394456 FAM231BA6NCW3 169 aa10.47□□□□□ -0.73
GTF2F1-201ENST00000394456 CCL25O15444 150 aa10.47□□□□□ -0.73
GTF2F1-201ENST00000394456 CRXO43186 299 aaPredicted RBP10.47□□□□□ -0.73
GTF2F1-201ENST00000394456 C1orf122Q6ZSJ8 110 aa10.47□□□□□ -0.73
GTF2F1-201ENST00000394456 WFDC3Q8IUB2 231 aa10.47□□□□□ -0.73
GTF2F1-201ENST00000394456 TMEM8BA6NDV4 472 aa10.47□□□□□ -0.73
GTF2F1-201ENST00000394456 ZNF207O43670 478 aaKnown RBP10.47□□□□□ -0.73
GTF2F1-201ENST00000394456 TMEM11P17152 192 aa10.47□□□□□ -0.73
GTF2F1-201ENST00000394456 PPIFP30405 207 aaKnown RBP10.47□□□□□ -0.73
GTF2F1-201ENST00000394456 RELQ04864 619 aaPredicted RBP10.47□□□□□ -0.73
GTF2F1-201ENST00000394456 GAGE1Q13065 139 aa10.47□□□□□ -0.73
GTF2F1-201ENST00000394456 ECSCRQ19T08 205 aa10.47□□□□□ -0.73
GTF2F1-201ENST00000394456 PIP4P2Q8N4L2 257 aa10.47□□□□□ -0.73
GTF2F1-201ENST00000394456 MRPS16Q9Y3D3 137 aaKnown RBP10.47□□□□□ -0.73
GTF2F1-201ENST00000394456 G3V318 75 aa10.46□□□□□ -0.73
GTF2F1-201ENST00000394456 PRB1P04280 392 aa10.46□□□□□ -0.73
GTF2F1-201ENST00000394456 GPR183P32249 361 aa10.46□□□□□ -0.73
GTF2F1-201ENST00000394456 RIGQ13278 110 aa10.46□□□□□ -0.73
GTF2F1-201ENST00000394456 Q8N6K4 173 aa10.46□□□□□ -0.73
GTF2F1-201ENST00000394456 SRSF8Q9BRL6 282 aaKnown RBP10.46□□□□□ -0.73
GTF2F1-201ENST00000394456 TRBV6-1A0A0K0K1D8 114 aa10.46□□□□□ -0.74
GTF2F1-201ENST00000394456 Q6ZQT7 251 aa10.46□□□□□ -0.74
GTF2F1-201ENST00000394456 TTC9CQ8N5M4 171 aa10.46□□□□□ -0.74
GTF2F1-201ENST00000394456 PRSS3P2Q8NHM4 247 aa10.46□□□□□ -0.74
GTF2F1-201ENST00000394456 AAMDCQ9H7C9 122 aa10.46□□□□□ -0.74
GTF2F1-201ENST00000394456 IGHV3OR16-10A0A075B7F0 116 aa10.45□□□□□ -0.74
GTF2F1-201ENST00000394456 TMEM189A5PLL7 270 aa10.45□□□□□ -0.74
GTF2F1-201ENST00000394456 K7EQM0 130 aa10.45□□□□□ -0.74
GTF2F1-201ENST00000394456 CCDC144NLQ6NUI1 221 aa10.45□□□□□ -0.74
GTF2F1-201ENST00000394456 Q8N9W7 124 aa10.45□□□□□ -0.74
GTF2F1-201ENST00000394456 AP5S1Q9NUS5 200 aa10.45□□□□□ -0.74
GTF2F1-201ENST00000394456 POLQO75417 2590 aa10.45□□□□□ -0.74
GTF2F1-201ENST00000394456 A0A087X0K7 114 aa10.45□□□□□ -0.74
GTF2F1-201ENST00000394456 CT45A10P0DMU9 189 aa10.45□□□□□ -0.74
GTF2F1-201ENST00000394456 OR8A1Q8NGG7 326 aa10.45□□□□□ -0.74
GTF2F1-201ENST00000394456 AJUBAQ96IF1 538 aa10.45□□□□□ -0.74
GTF2F1-201ENST00000394456 PRR25Q96S07 402 aa10.45□□□□□ -0.74
GTF2F1-201ENST00000394456 SIGLEC8Q9NYZ4 499 aa10.45□□□□□ -0.74
GTF2F1-201ENST00000394456 LINC00527Q9UJ94 153 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms