RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 LOC389332A0A1B0GUA5 103 aa14.91□□□□□ -0.02
HOXC6-202ENST00000394331 XGP55808 180 aa14.91□□□□□ -0.02
HOXC6-202ENST00000394331 SUB1P53999 127 aaKnown RBP eCLIP14.91□□□□□ -0.02
HOXC6-202ENST00000394331 C22orf34Q6ZV56 151 aa14.91□□□□□ -0.02
HOXC6-202ENST00000394331 ANAPC13Q9BS18 74 aa14.91□□□□□ -0.02
HOXC6-202ENST00000394331 PRRC2CQ9Y520 2896 aaKnown RBP14.9□□□□□ -0.02
HOXC6-202ENST00000394331 IGKCP01834 107 aa14.9□□□□□ -0.02
HOXC6-202ENST00000394331 EP300Q09472 2414 aaPredicted RBP14.9□□□□□ -0.02
HOXC6-202ENST00000394331 DSCAMO60469 2012 aa14.9□□□□□ -0.02
HOXC6-202ENST00000394331 SAA1P0DJI8 122 aaPredicted RBP14.9□□□□□ -0.02
HOXC6-202ENST00000394331 AMTNQ6UX39 209 aa14.9□□□□□ -0.02
HOXC6-202ENST00000394331 TMEM75Q8N9X5 138 aa14.9□□□□□ -0.02
HOXC6-202ENST00000394331 PLAUP00749 431 aa14.89□□□□□ -0.03
HOXC6-202ENST00000394331 IGKV1-16P04430 117 aa14.89□□□□□ -0.03
HOXC6-202ENST00000394331 OSR1Q8TAX0 266 aaPredicted RBP14.89□□□□□ -0.03
HOXC6-202ENST00000394331 TMEM158Q8WZ71 300 aa14.89□□□□□ -0.03
HOXC6-202ENST00000394331 TRGV9Q99603 122 aa14.89□□□□□ -0.03
HOXC6-202ENST00000394331 TMEM133Q9H2Q1 129 aa14.89□□□□□ -0.03
HOXC6-202ENST00000394331 TMEM14CQ9P0S9 112 aa14.89□□□□□ -0.03
HOXC6-202ENST00000394331 PRNTQ86SH4 94 aa14.88□□□□□ -0.03
HOXC6-202ENST00000394331 PRRG2O14669 202 aa14.88□□□□□ -0.03
HOXC6-202ENST00000394331 CCL8P80075 99 aa14.88□□□□□ -0.03
HOXC6-202ENST00000394331 ZNF833PQ6ZTB9 187 aa14.88□□□□□ -0.03
HOXC6-202ENST00000394331 K7EM74 188 aa14.87□□□□□ -0.03
HOXC6-202ENST00000394331 FHL3Q13643 280 aa14.87□□□□□ -0.03
HOXC6-202ENST00000394331 TANC2Q9HCD6 1990 aa14.87□□□□□ -0.03
HOXC6-202ENST00000394331 C17orf100A8MU93 164 aa14.87□□□□□ -0.03
HOXC6-202ENST00000394331 ATP5LO75964 103 aa14.87□□□□□ -0.03
HOXC6-202ENST00000394331 MRPL51Q4U2R6 128 aaKnown RBP14.87□□□□□ -0.03
HOXC6-202ENST00000394331 TRBV7-9A0A0J9YWB2 115 aa14.86□□□□□ -0.03
HOXC6-202ENST00000394331 DPM2O94777 84 aa14.86□□□□□ -0.03
HOXC6-202ENST00000394331 OR10X1Q8NGY0 326 aa14.86□□□□□ -0.03
HOXC6-202ENST00000394331 DSCAML1Q8TD84 2053 aa14.86□□□□□ -0.03
HOXC6-202ENST00000394331 TRAV8-1A0A0A6YYK1 113 aa14.86□□□□□ -0.03
HOXC6-202ENST00000394331 ORM2P19652 201 aa14.86□□□□□ -0.03
HOXC6-202ENST00000394331 SMCPP49901 116 aaPredicted RBP14.86□□□□□ -0.03
HOXC6-202ENST00000394331 TWIST1Q15672 202 aa14.86□□□□□ -0.03
HOXC6-202ENST00000394331 SHISA2Q6UWI4 295 aa14.86□□□□□ -0.03
HOXC6-202ENST00000394331 NFE4Q86UQ8 179 aa14.86□□□□□ -0.03
HOXC6-202ENST00000394331 PPDPFLQ8WWR9 84 aa14.86□□□□□ -0.03
HOXC6-202ENST00000394331 TTTY13Q9BZ97 58 aa14.86□□□□□ -0.03
HOXC6-202ENST00000394331 SSUH2Q9Y2M2 353 aa14.86□□□□□ -0.03
HOXC6-202ENST00000394331 DLX4Q92988 240 aaPredicted RBP14.86□□□□□ -0.03
HOXC6-202ENST00000394331 SLC25A39Q9BZJ4 359 aaPredicted RBP14.86□□□□□ -0.03
HOXC6-202ENST00000394331 RALYQ9UKM9 306 aaKnown RBP14.86□□□□□ -0.03
HOXC6-202ENST00000394331 TRBV7-3A0A075B6L6 115 aa14.85□□□□□ -0.03
HOXC6-202ENST00000394331 FCER1GP30273 86 aa14.85□□□□□ -0.03
HOXC6-202ENST00000394331 GOLT1AQ6ZVE7 132 aa14.85□□□□□ -0.03
HOXC6-202ENST00000394331 AMN1Q8IY45 258 aa14.85□□□□□ -0.03
HOXC6-202ENST00000394331 ADIPOQQ15848 244 aa14.85□□□□□ -0.03
HOXC6-202ENST00000394331 ZFAND6Q6FIF0 208 aa14.85□□□□□ -0.03
HOXC6-202ENST00000394331 PVRIGQ6DKI7 326 aa14.84□□□□□ -0.03
HOXC6-202ENST00000394331 FLYWCH2Q96CP2 140 aaKnown RBP14.84□□□□□ -0.03
HOXC6-202ENST00000394331 HARBI1Q96MB7 349 aa14.84□□□□□ -0.03
HOXC6-202ENST00000394331 MRPL20Q9BYC9 149 aaKnown RBP14.84□□□□□ -0.03
HOXC6-202ENST00000394331 ZNRD1Q9P1U0 126 aa14.84□□□□□ -0.03
HOXC6-202ENST00000394331 CNOT1A5YKK6 2376 aaKnown RBP14.84□□□□□ -0.03
HOXC6-202ENST00000394331 LOC400499M0QZD8 3231 aa14.84□□□□□ -0.03
HOXC6-202ENST00000394331 A0A0G2JNJ9 132 aa14.84□□□□□ -0.03
HOXC6-202ENST00000394331 WT1-ASQ06250 92 aa14.84□□□□□ -0.03
HOXC6-202ENST00000394331 MRPL36Q9P0J6 103 aaKnown RBP14.84□□□□□ -0.03
HOXC6-202ENST00000394331 Q9UFV3 132 aa14.84□□□□□ -0.03
HOXC6-202ENST00000394331 SPANXA1Q9NS26 97 aa14.83□□□□□ -0.03
HOXC6-202ENST00000394331 NPYP01303 97 aa14.83□□□□□ -0.04
HOXC6-202ENST00000394331 ZC2HC1BQ5TFG8 222 aa14.83□□□□□ -0.04
HOXC6-202ENST00000394331 TMEM167AQ8TBQ9 72 aa14.83□□□□□ -0.04
HOXC6-202ENST00000394331 RAX2Q96IS3 184 aa14.83□□□□□ -0.04
HOXC6-202ENST00000394331 FXYD7P58549 80 aa14.82□□□□□ -0.04
HOXC6-202ENST00000394331 MORN3Q6PF18 240 aaPredicted RBP14.82□□□□□ -0.04
HOXC6-202ENST00000394331 SRD5A1P18405 259 aa14.82□□□□□ -0.04
HOXC6-202ENST00000394331 GTSCR1Q86UQ5 136 aa14.82□□□□□ -0.04
HOXC6-202ENST00000394331 TTC28Q96AY4 2481 aa14.82□□□□□ -0.04
HOXC6-202ENST00000394331 TNCP24821 2201 aa14.82□□□□□ -0.04
HOXC6-202ENST00000394331 TMEM262E9PQX1 116 aa14.82□□□□□ -0.04
HOXC6-202ENST00000394331 CCL3L1P16619 93 aa14.82□□□□□ -0.04
HOXC6-202ENST00000394331 CKS2P33552 79 aa14.82□□□□□ -0.04
HOXC6-202ENST00000394331 TMEM200BQ69YZ2 307 aa14.82□□□□□ -0.04
HOXC6-202ENST00000394331 TEN1Q86WV5 123 aa14.82□□□□□ -0.04
HOXC6-202ENST00000394331 HIST1H4GQ99525 98 aa14.82□□□□□ -0.04
HOXC6-202ENST00000394331 CITED1Q99966 193 aa14.82□□□□□ -0.04
HOXC6-202ENST00000394331 CGB1A6NKQ9 187 aa14.81□□□□□ -0.04
HOXC6-202ENST00000394331 BSPH1Q075Z2 132 aa14.81□□□□□ -0.04
HOXC6-202ENST00000394331 LYZL1Q6UWQ5 148 aa14.81□□□□□ -0.04
HOXC6-202ENST00000394331 MAP1LC3AQ9H492 121 aa14.81□□□□□ -0.04
HOXC6-202ENST00000394331 RAI1Q7Z5J4 1906 aaPredicted RBP14.81□□□□□ -0.04
HOXC6-202ENST00000394331 TMEM178BH3BS89 294 aa14.81□□□□□ -0.04
HOXC6-202ENST00000394331 CRIP1P50238 77 aa14.81□□□□□ -0.04
HOXC6-202ENST00000394331 TEX29Q8N6K0 151 aa14.81□□□□□ -0.04
HOXC6-202ENST00000394331 OR4C13Q8NGP0 309 aa14.81□□□□□ -0.04
HOXC6-202ENST00000394331 NXT2Q9NPJ8 142 aaKnown RBP14.81□□□□□ -0.04
HOXC6-202ENST00000394331 ICE1Q9Y2F5 2266 aa14.81□□□□□ -0.04
HOXC6-202ENST00000394331 PLCE1Q9P212 2302 aa14.8□□□□□ -0.04
HOXC6-202ENST00000394331 TMEM213A2RRL7 107 aa14.8□□□□□ -0.04
HOXC6-202ENST00000394331 NDUFB3O43676 98 aa14.8□□□□□ -0.04
HOXC6-202ENST00000394331 C8orf31Q8N9H6 132 aa14.8□□□□□ -0.04
HOXC6-202ENST00000394331 RBP4P02753 201 aa14.8□□□□□ -0.04
HOXC6-202ENST00000394331 LYPD1Q8N2G4 141 aa14.8□□□□□ -0.04
HOXC6-202ENST00000394331 UFC1Q9Y3C8 167 aa14.8□□□□□ -0.04
HOXC6-202ENST00000394331 B5MCH6 92 aa14.79□□□□□ -0.04
HOXC6-202ENST00000394331 PRSS1P07477 247 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms