RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 HMGB3O15347 200 aaKnown RBP11.87□□□□□ -0.51
TGFA-202ENST00000394241 NBEAP1P0C6P0 100 aa11.87□□□□□ -0.51
TGFA-202ENST00000394241 STAG3L2P0CL84 134 aa11.87□□□□□ -0.51
TGFA-202ENST00000394241 STAG3L3P0CL85 134 aa11.87□□□□□ -0.51
TGFA-202ENST00000394241 HLA-DMBP28068 263 aa11.87□□□□□ -0.51
TGFA-202ENST00000394241 DEFB1P60022 68 aa11.87□□□□□ -0.51
TGFA-202ENST00000394241 PSG9Q00887 426 aa11.87□□□□□ -0.51
TGFA-202ENST00000394241 PSG3Q16557 428 aa11.87□□□□□ -0.51
TGFA-202ENST00000394241 KIR2DL5AQ8N109 375 aa11.87□□□□□ -0.51
TGFA-202ENST00000394241 KIR2DL5BQ8NHK3 375 aa11.87□□□□□ -0.51
TGFA-202ENST00000394241 ZNF503Q96F45 646 aa11.87□□□□□ -0.51
TGFA-202ENST00000394241 A0A0J9YX75 114 aa11.86□□□□□ -0.51
TGFA-202ENST00000394241 CTXND1A0A1B0GTU2 59 aa11.86□□□□□ -0.51
TGFA-202ENST00000394241 H3BMM0 161 aa11.86□□□□□ -0.51
TGFA-202ENST00000394241 ARL14EPLP0DKL9 152 aa11.86□□□□□ -0.51
TGFA-202ENST00000394241 GDF5OSQ5U4N7 250 aa11.86□□□□□ -0.51
TGFA-202ENST00000394241 SLC51BQ86UW2 128 aa11.86□□□□□ -0.51
TGFA-202ENST00000394241 SPATA25Q9BR10 227 aa11.86□□□□□ -0.51
TGFA-202ENST00000394241 AAMDCQ9H7C9 122 aa11.86□□□□□ -0.51
TGFA-202ENST00000394241 UMAD1C9J7I0 102 aa11.85□□□□□ -0.51
TGFA-202ENST00000394241 F6UB75 175 aa11.85□□□□□ -0.51
TGFA-202ENST00000394241 UBE2CO00762 179 aa11.85□□□□□ -0.51
TGFA-202ENST00000394241 NDUFB4O95168 129 aa11.85□□□□□ -0.51
TGFA-202ENST00000394241 EIF5AL1Q6IS14 154 aaKnown RBP11.85□□□□□ -0.51
TGFA-202ENST00000394241 MORN3Q6PF18 240 aaPredicted RBP11.85□□□□□ -0.51
TGFA-202ENST00000394241 RPUSD4Q96CM3 377 aaKnown RBP11.85□□□□□ -0.51
TGFA-202ENST00000394241 PHYHIPLQ96FC7 376 aa11.85□□□□□ -0.51
TGFA-202ENST00000394241 CSTL1Q9H114 145 aa11.85□□□□□ -0.51
TGFA-202ENST00000394241 PRELID1Q9Y255 219 aa11.85□□□□□ -0.51
TGFA-202ENST00000394241 FRAS1Q86XX4 4008 aa11.85□□□□□ -0.51
TGFA-202ENST00000394241 CXorf1O96002 111 aa11.84□□□□□ -0.51
TGFA-202ENST00000394241 CA1P00915 261 aaPredicted RBP11.84□□□□□ -0.51
TGFA-202ENST00000394241 SSX7Q7RTT5 188 aa11.84□□□□□ -0.51
TGFA-202ENST00000394241 OR4B1Q8NGF8 309 aa11.84□□□□□ -0.51
TGFA-202ENST00000394241 TMED6Q8WW62 240 aa11.84□□□□□ -0.51
TGFA-202ENST00000394241 MRPL53Q96EL3 112 aaKnown RBP11.84□□□□□ -0.51
TGFA-202ENST00000394241 AGRNO00468 2067 aa11.83□□□□□ -0.51
TGFA-202ENST00000394241 DUSP14O95147 198 aaKnown RBP11.83□□□□□ -0.52
TGFA-202ENST00000394241 IGKV3-20P01619 116 aa11.83□□□□□ -0.52
TGFA-202ENST00000394241 NKX2-5P52952 324 aaPredicted RBP11.83□□□□□ -0.52
TGFA-202ENST00000394241 NUTF2P61970 127 aaKnown RBP11.83□□□□□ -0.52
TGFA-202ENST00000394241 HIST1H1AQ02539 215 aaPredicted RBP11.83□□□□□ -0.52
TGFA-202ENST00000394241 ZNF726P1Q15940 193 aa11.83□□□□□ -0.52
TGFA-202ENST00000394241 EXOC3-AS1Q8N2X6 119 aa11.83□□□□□ -0.52
TGFA-202ENST00000394241 OR8A1Q8NGG7 326 aa11.83□□□□□ -0.52
TGFA-202ENST00000394241 MAP1LC3B2A6NCE7 125 aa11.82□□□□□ -0.52
TGFA-202ENST00000394241 ZNF705FA8MVS1 300 aaPredicted RBP11.82□□□□□ -0.52
TGFA-202ENST00000394241 GCHFRP30047 84 aa11.82□□□□□ -0.52
TGFA-202ENST00000394241 CNN1P51911 297 aaKnown RBP11.82□□□□□ -0.52
TGFA-202ENST00000394241 ICAM4Q14773 271 aa11.82□□□□□ -0.52
TGFA-202ENST00000394241 DEFB135Q30KP9 77 aa11.82□□□□□ -0.52
TGFA-202ENST00000394241 DPPA3Q6W0C5 159 aa11.82□□□□□ -0.52
TGFA-202ENST00000394241 Q6ZWC4 215 aa11.82□□□□□ -0.52
TGFA-202ENST00000394241 IQCF2Q8IXL9 164 aa11.82□□□□□ -0.52
TGFA-202ENST00000394241 LYPD1Q8N2G4 141 aa11.82□□□□□ -0.52
TGFA-202ENST00000394241 CLUHP3Q96NS8 147 aa11.82□□□□□ -0.52
TGFA-202ENST00000394241 MAP1LC3BQ9GZQ8 125 aa11.82□□□□□ -0.52
TGFA-202ENST00000394241 Q9H3A6 140 aa11.82□□□□□ -0.52
TGFA-202ENST00000394241 TMEM167BQ9NRX6 74 aa11.82□□□□□ -0.52
TGFA-202ENST00000394241 M0R3E3 92 aa11.81□□□□□ -0.52
TGFA-202ENST00000394241 ZNF705DP0CH99 300 aaPredicted RBP11.81□□□□□ -0.52
TGFA-202ENST00000394241 ZNF705BP0CI00 300 aaPredicted RBP11.81□□□□□ -0.52
TGFA-202ENST00000394241 RANP62826 216 aaKnown RBP11.81□□□□□ -0.52
TGFA-202ENST00000394241 OR10J6PQ8NGY7 276 aa11.81□□□□□ -0.52
TGFA-202ENST00000394241 FAM213BQ8TBF2 198 aa11.81□□□□□ -0.52
TGFA-202ENST00000394241 RETNQ9HD89 108 aa11.81□□□□□ -0.52
TGFA-202ENST00000394241 ALMS1Q8TCU4 4167 aa11.8□□□□□ -0.52
TGFA-202ENST00000394241 A8MTW9 85 aa11.8□□□□□ -0.52
TGFA-202ENST00000394241 PRB4P10163 310 aaPredicted RBP11.8□□□□□ -0.52
TGFA-202ENST00000394241 FHITP49789 147 aa11.8□□□□□ -0.52
TGFA-202ENST00000394241 FAM74A1Q5RGS3 127 aa11.8□□□□□ -0.52
TGFA-202ENST00000394241 C1QTNF4Q9BXJ3 329 aa11.8□□□□□ -0.52
TGFA-202ENST00000394241 OTORQ9NRC9 128 aa11.8□□□□□ -0.52
TGFA-202ENST00000394241 PLA2G2EQ9NZK7 142 aa11.8□□□□□ -0.52
TGFA-202ENST00000394241 TP53TG1Q9Y2A0 90 aa11.8□□□□□ -0.52
TGFA-202ENST00000394241 PLECQ15149 4684 aaKnown RBP11.8□□□□□ -0.52
TGFA-202ENST00000394241 PRAC2D3DTV9 90 aa11.79□□□□□ -0.52
TGFA-202ENST00000394241 CSN1S1P47710 185 aa11.79□□□□□ -0.52
TGFA-202ENST00000394241 RAB5CP51148 216 aa11.79□□□□□ -0.52
TGFA-202ENST00000394241 FGF8P55075 233 aaPredicted RBP11.79□□□□□ -0.52
TGFA-202ENST00000394241 IL17DQ8TAD2 202 aa11.79□□□□□ -0.52
TGFA-202ENST00000394241 SUN5Q8TC36 379 aa11.79□□□□□ -0.52
TGFA-202ENST00000394241 RNF183Q96D59 192 aa11.78□□□□□ -0.52
TGFA-202ENST00000394241 SLC35B3Q9H1N7 401 aa11.78□□□□□ -0.52
TGFA-202ENST00000394241 PPP1R14DQ9NXH3 145 aa11.78□□□□□ -0.52
TGFA-202ENST00000394241 PGPA6NDG6 321 aa11.77□□□□□ -0.53
TGFA-202ENST00000394241 BOLA2-SMG1P6H3BVE0 249 aa11.77□□□□□ -0.53
TGFA-202ENST00000394241 SPRY2O43597 315 aa11.77□□□□□ -0.53
TGFA-202ENST00000394241 GIG44P09565 113 aaPredicted RBP11.77□□□□□ -0.53
TGFA-202ENST00000394241 SULT1A2P50226 295 aa11.77□□□□□ -0.53
TGFA-202ENST00000394241 FXYD7P58549 80 aa11.77□□□□□ -0.53
TGFA-202ENST00000394241 AMTNQ6UX39 209 aa11.77□□□□□ -0.53
TGFA-202ENST00000394241 CMTM2Q8TAZ6 248 aa11.77□□□□□ -0.53
TGFA-202ENST00000394241 RXFP4Q8TDU9 374 aa11.77□□□□□ -0.53
TGFA-202ENST00000394241 OVOL2Q9BRP0 275 aa11.77□□□□□ -0.53
TGFA-202ENST00000394241 XCL2Q9UBD3 114 aa11.77□□□□□ -0.53
TGFA-202ENST00000394241 NPIPB6E9PJ23 425 aa11.76□□□□□ -0.53
TGFA-202ENST00000394241 AMBPP02760 352 aa11.76□□□□□ -0.53
TGFA-202ENST00000394241 H2AFB1P0C5Y9 115 aa11.76□□□□□ -0.53
TGFA-202ENST00000394241 SFT2D1Q8WV19 159 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms