RNA–Protein interactions for RNA: ENST00000393384.3

CRAT-202, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 2 BASIC

Gene CRAT, Length 973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-202ENST00000393384 LINC01587Q99440 93 aa13.5□□□□□ -0.25
CRAT-202ENST00000393384 DYNC1H1Q14204 4646 aaKnown RBP13.49□□□□□ -0.25
CRAT-202ENST00000393384 DNAH11Q96DT5 4516 aa13.49□□□□□ -0.25
CRAT-202ENST00000393384 H3BTX0 84 aa13.49□□□□□ -0.25
CRAT-202ENST00000393384 MPDU1O75352 247 aa13.49□□□□□ -0.25
CRAT-202ENST00000393384 PRB4P10163 310 aaPredicted RBP13.49□□□□□ -0.25
CRAT-202ENST00000393384 HTN3P15516 51 aa13.49□□□□□ -0.25
CRAT-202ENST00000393384 AZU1P20160 251 aa13.49□□□□□ -0.25
CRAT-202ENST00000393384 FGF7P21781 194 aa13.49□□□□□ -0.25
CRAT-202ENST00000393384 TAS2R60P59551 318 aa13.49□□□□□ -0.25
CRAT-202ENST00000393384 IFITM3Q01628 133 aa13.49□□□□□ -0.25
CRAT-202ENST00000393384 NMES1Q9C002 83 aa13.49□□□□□ -0.25
CRAT-202ENST00000393384 PTTG2Q9NZH5 202 aa13.49□□□□□ -0.25
CRAT-202ENST00000393384 PLAC8L1A1L4L8 177 aa13.48□□□□□ -0.25
CRAT-202ENST00000393384 PRAF2O60831 178 aa13.48□□□□□ -0.25
CRAT-202ENST00000393384 RLN2P04090 185 aa13.48□□□□□ -0.25
CRAT-202ENST00000393384 OR10J6PQ8NGY7 276 aa13.48□□□□□ -0.25
CRAT-202ENST00000393384 C20orf144Q9BQM9 153 aa13.48□□□□□ -0.25
CRAT-202ENST00000393384 PRAC2D3DTV9 90 aa13.47□□□□□ -0.25
CRAT-202ENST00000393384 E5RGE8 158 aa13.47□□□□□ -0.25
CRAT-202ENST00000393384 ZNF253O75346 499 aa13.47□□□□□ -0.25
CRAT-202ENST00000393384 SIX6O95475 246 aa13.47□□□□□ -0.25
CRAT-202ENST00000393384 NHLH2Q02577 135 aa13.47□□□□□ -0.25
CRAT-202ENST00000393384 SLC25A31Q9H0C2 315 aa13.47□□□□□ -0.25
CRAT-202ENST00000393384 ZNF586Q9NXT0 402 aa13.47□□□□□ -0.25
CRAT-202ENST00000393384 NACAE9PAV3 2078 aa13.46□□□□□ -0.25
CRAT-202ENST00000393384 INMT-MINDY4F8WBC2 141 aa13.46□□□□□ -0.25
CRAT-202ENST00000393384 CYCSP99999 105 aaKnown RBP13.46□□□□□ -0.25
CRAT-202ENST00000393384 C16orf74Q96GX8 76 aa13.46□□□□□ -0.25
CRAT-202ENST00000393384 NPCDR1Q9BY65 106 aa13.46□□□□□ -0.25
CRAT-202ENST00000393384 TMEM14CQ9P0S9 112 aa13.46□□□□□ -0.25
CRAT-202ENST00000393384 H7BYZ3 331 aa13.45□□□□□ -0.26
CRAT-202ENST00000393384 TMEM88Q6PEY1 159 aa13.45□□□□□ -0.26
CRAT-202ENST00000393384 OR5C1Q8NGR4 320 aa13.45□□□□□ -0.26
CRAT-202ENST00000393384 ABCA13Q86UQ4 5058 aa13.44□□□□□ -0.26
CRAT-202ENST00000393384 PRSS29PA6NIE9 313 aa13.44□□□□□ -0.26
CRAT-202ENST00000393384 DEFB130BP0DP73 79 aa13.44□□□□□ -0.26
CRAT-202ENST00000393384 DEFB130AP0DP74 79 aa13.44□□□□□ -0.26
CRAT-202ENST00000393384 HTN1P15515 57 aa13.44□□□□□ -0.26
CRAT-202ENST00000393384 FCN2Q15485 313 aa13.44□□□□□ -0.26
CRAT-202ENST00000393384 LRRC37A5PQ49AS3 106 aa13.44□□□□□ -0.26
CRAT-202ENST00000393384 ZNF493Q6ZR52 646 aa13.44□□□□□ -0.26
CRAT-202ENST00000393384 UBE2DNLQ8IWF7 75 aa13.44□□□□□ -0.26
CRAT-202ENST00000393384 MRPL53Q96EL3 112 aaKnown RBP13.44□□□□□ -0.26
CRAT-202ENST00000393384 ODF3Q96PU9 254 aa13.44□□□□□ -0.26
CRAT-202ENST00000393384 MARVELD1Q9BSK0 173 aa13.44□□□□□ -0.26
CRAT-202ENST00000393384 OR5AC2Q9NZP5 309 aa13.44□□□□□ -0.26
CRAT-202ENST00000393384 TRBV19A0A075B6N1 114 aa13.43□□□□□ -0.26
CRAT-202ENST00000393384 H0YIZ8 118 aa13.43□□□□□ -0.26
CRAT-202ENST00000393384 HIST1H1EP10412 219 aaKnown RBP13.43□□□□□ -0.26
CRAT-202ENST00000393384 KIR3DS1Q14943 382 aa13.43□□□□□ -0.26
CRAT-202ENST00000393384 RNF212Q495C1 297 aa13.43□□□□□ -0.26
CRAT-202ENST00000393384 C15orf53Q8NAA6 179 aa13.43□□□□□ -0.26
CRAT-202ENST00000393384 RNASE8Q8TDE3 154 aaKnown RBP13.43□□□□□ -0.26
CRAT-202ENST00000393384 TMEM263Q8WUH6 116 aaKnown RBP13.43□□□□□ -0.26
CRAT-202ENST00000393384 PARD6GQ9BYG4 376 aaPredicted RBP13.43□□□□□ -0.26
CRAT-202ENST00000393384 TIMM8BQ9Y5J9 83 aaPredicted RBP13.43□□□□□ -0.26
CRAT-202ENST00000393384 NPIPB6E9PJ23 425 aa13.42□□□□□ -0.26
CRAT-202ENST00000393384 CT45A10P0DMU9 189 aa13.42□□□□□ -0.26
CRAT-202ENST00000393384 PDE6HQ13956 83 aa13.42□□□□□ -0.26
CRAT-202ENST00000393384 LGALS9BQ3B8N2 356 aa13.42□□□□□ -0.26
CRAT-202ENST00000393384 GFI1BQ5VTD9 330 aa13.42□□□□□ -0.26
CRAT-202ENST00000393384 THAP6Q8TBB0 222 aa13.42□□□□□ -0.26
CRAT-202ENST00000393384 PRELID1Q9Y255 219 aa13.42□□□□□ -0.26
CRAT-202ENST00000393384 CBY3A6NI87 242 aa13.41□□□□□ -0.26
CRAT-202ENST00000393384 RTL8CO15255 209 aa13.41□□□□□ -0.26
CRAT-202ENST00000393384 ATP5G1P05496 136 aa13.41□□□□□ -0.26
CRAT-202ENST00000393384 LEPP41159 167 aa13.41□□□□□ -0.26
CRAT-202ENST00000393384 ATP5G3P48201 142 aa13.41□□□□□ -0.26
CRAT-202ENST00000393384 H2BFSP57053 126 aa13.41□□□□□ -0.26
CRAT-202ENST00000393384 DEFA1P59665 94 aa13.41□□□□□ -0.26
CRAT-202ENST00000393384 DEFA3P59666 94 aa13.41□□□□□ -0.26
CRAT-202ENST00000393384 GCSAMLQ5JQS6 135 aa13.41□□□□□ -0.26
CRAT-202ENST00000393384 TIMM9Q9Y5J7 89 aa13.41□□□□□ -0.26
CRAT-202ENST00000393384 NDUFB4O95168 129 aa13.4□□□□□ -0.26
CRAT-202ENST00000393384 PYYP10082 97 aa13.4□□□□□ -0.26
CRAT-202ENST00000393384 CLINT1Q14677 625 aa13.4□□□□□ -0.26
CRAT-202ENST00000393384 CCDC28AQ8IWP9 274 aa13.4□□□□□ -0.26
CRAT-202ENST00000393384 PPP1R1CQ8WVI7 109 aa13.4□□□□□ -0.26
CRAT-202ENST00000393384 SLC25A2Q9BXI2 301 aa13.4□□□□□ -0.26
CRAT-202ENST00000393384 WDR61Q9GZS3 305 aaKnown RBP13.4□□□□□ -0.26
CRAT-202ENST00000393384 KCNIP2Q9NS61 270 aa13.4□□□□□ -0.26
CRAT-202ENST00000393384 F5H768 121 aa13.39□□□□□ -0.27
CRAT-202ENST00000393384 M0R2N4 97 aa13.39□□□□□ -0.27
CRAT-202ENST00000393384 M0R3E3 92 aa13.39□□□□□ -0.27
CRAT-202ENST00000393384 NOP10Q9NPE3 64 aaKnown RBP13.39□□□□□ -0.27
CRAT-202ENST00000393384 PKD1P98161 4303 aa13.38□□□□□ -0.27
CRAT-202ENST00000393384 C17orf112F2Z3M2 114 aa13.38□□□□□ -0.27
CRAT-202ENST00000393384 J3KRW8 73 aa13.38□□□□□ -0.27
CRAT-202ENST00000393384 MIR17HGQ75NE6 70 aa13.38□□□□□ -0.27
CRAT-202ENST00000393384 BLNKQ8WV28 456 aa13.38□□□□□ -0.27
CRAT-202ENST00000393384 FAM167A-AS1Q96KT0 104 aa13.38□□□□□ -0.27
CRAT-202ENST00000393384 LINC00477Q96M19 166 aa13.38□□□□□ -0.27
CRAT-202ENST00000393384 MRPL32Q9BYC8 188 aaKnown RBP13.38□□□□□ -0.27
CRAT-202ENST00000393384 AAMDCQ9H7C9 122 aa13.38□□□□□ -0.27
CRAT-202ENST00000393384 TRAV12-3A0A0B4J271 114 aa13.37□□□□□ -0.27
CRAT-202ENST00000393384 SSNA1O43805 119 aa13.37□□□□□ -0.27
CRAT-202ENST00000393384 MPC2O95563 127 aa13.37□□□□□ -0.27
CRAT-202ENST00000393384 SLC25A5P05141 298 aaKnown RBP13.37□□□□□ -0.27
CRAT-202ENST00000393384 PET100P0DJ07 73 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms