RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 CFAP161Q6P656 301 aa8.43□□□□□ -1.06
CALD1-203ENST00000393118 TNRC6BQ9UPQ9 1833 aaKnown RBP8.43□□□□□ -1.06
CALD1-203ENST00000393118 M0R3E3 92 aa8.43□□□□□ -1.06
CALD1-203ENST00000393118 SLAQ13239 276 aa8.43□□□□□ -1.06
CALD1-203ENST00000393118 NUP35Q8NFH5 326 aa8.43□□□□□ -1.06
CALD1-203ENST00000393118 NEU4Q8WWR8 484 aaPredicted RBP8.43□□□□□ -1.06
CALD1-203ENST00000393118 LY6EQ16553 131 aa8.42□□□□□ -1.06
CALD1-203ENST00000393118 TTC32Q5I0X7 151 aa8.42□□□□□ -1.06
CALD1-203ENST00000393118 EBLN2Q6P2I7 272 aa8.42□□□□□ -1.06
CALD1-203ENST00000393118 TRGV9Q99603 122 aa8.42□□□□□ -1.06
CALD1-203ENST00000393118 LINC00527Q9UJ94 153 aa8.42□□□□□ -1.06
CALD1-203ENST00000393118 TMEM189A5PLL7 270 aa8.42□□□□□ -1.06
CALD1-203ENST00000393118 SPINK8P0C7L1 97 aa8.42□□□□□ -1.06
CALD1-203ENST00000393118 FAM168AQ92567 244 aa8.42□□□□□ -1.06
CALD1-203ENST00000393118 LOC400499M0QZD8 3231 aa8.42□□□□□ -1.06
CALD1-203ENST00000393118 NDUFS7O75251 213 aa8.42□□□□□ -1.06
CALD1-203ENST00000393118 TCRAP04437 139 aa8.42□□□□□ -1.06
CALD1-203ENST00000393118 C11orf52Q96A22 123 aa8.42□□□□□ -1.06
CALD1-203ENST00000393118 HIST1H4GQ99525 98 aa8.42□□□□□ -1.06
CALD1-203ENST00000393118 LY96Q9Y6Y9 160 aa8.42□□□□□ -1.06
CALD1-203ENST00000393118 K7EP34 96 aa8.41□□□□□ -1.06
CALD1-203ENST00000393118 LINC00311Q8N616 119 aa8.41□□□□□ -1.06
CALD1-203ENST00000393118 FMC1Q96HJ9 113 aa8.41□□□□□ -1.06
CALD1-203ENST00000393118 RABAC1Q9UI14 185 aa8.41□□□□□ -1.06
CALD1-203ENST00000393118 PRSS46E5RG02 174 aa8.41□□□□□ -1.06
CALD1-203ENST00000393118 RPL7P18124 248 aaKnown RBP8.41□□□□□ -1.06
CALD1-203ENST00000393118 TMEM249Q2WGJ8 235 aa8.41□□□□□ -1.06
CALD1-203ENST00000393118 CITED1Q99966 193 aa8.41□□□□□ -1.06
CALD1-203ENST00000393118 HIVEP3Q5T1R4 2406 aa8.41□□□□□ -1.06
CALD1-203ENST00000393118 A0A1B0GW15 77 aa8.41□□□□□ -1.06
CALD1-203ENST00000393118 C9orf118A6NHY6 69 aa8.41□□□□□ -1.06
CALD1-203ENST00000393118 APOMO95445 188 aa8.41□□□□□ -1.06
CALD1-203ENST00000393118 IGLC1P0CG04 106 aa8.41□□□□□ -1.06
CALD1-203ENST00000393118 FXYD7P58549 80 aa8.41□□□□□ -1.06
CALD1-203ENST00000393118 IGFL4Q6B9Z1 124 aa8.41□□□□□ -1.06
CALD1-203ENST00000393118 VMO1Q7Z5L0 202 aa8.41□□□□□ -1.06
CALD1-203ENST00000393118 OTORQ9NRC9 128 aa8.41□□□□□ -1.06
CALD1-203ENST00000393118 KAAG1Q9UBP8 84 aa8.41□□□□□ -1.06
CALD1-203ENST00000393118 UFC1Q9Y3C8 167 aa8.41□□□□□ -1.06
CALD1-203ENST00000393118 MSRB2Q9Y3D2 182 aa8.41□□□□□ -1.06
CALD1-203ENST00000393118 WDFY3Q8IZQ1 3526 aa8.4□□□□□ -1.06
CALD1-203ENST00000393118 CACNG7P62955 275 aa8.4□□□□□ -1.06
CALD1-203ENST00000393118 TWIST1Q15672 202 aa8.4□□□□□ -1.06
CALD1-203ENST00000393118 PRSS57Q6UWY2 283 aa8.4□□□□□ -1.06
CALD1-203ENST00000393118 S100A4P26447 101 aaKnown RBP8.4□□□□□ -1.06
CALD1-203ENST00000393118 PATE2Q6UY27 113 aa8.4□□□□□ -1.06
CALD1-203ENST00000393118 ZNF414Q96IQ9 312 aa8.4□□□□□ -1.06
CALD1-203ENST00000393118 TP53TG3Q9ULZ0 132 aa8.4□□□□□ -1.06
CALD1-203ENST00000393118 C5orf64Q2M2E5 130 aa8.4□□□□□ -1.06
CALD1-203ENST00000393118 CD300EQ496F6 205 aaPredicted RBP8.4□□□□□ -1.06
CALD1-203ENST00000393118 RBPMS2Q6ZRY4 209 aaKnown RBP8.4□□□□□ -1.06
CALD1-203ENST00000393118 G3V4G9 280 aa8.4□□□□□ -1.07
CALD1-203ENST00000393118 Q1RN00 199 aa8.4□□□□□ -1.07
CALD1-203ENST00000393118 ANXA2RQ3ZCQ2 193 aa8.4□□□□□ -1.07
CALD1-203ENST00000393118 SCGB1D4Q6XE38 83 aa8.4□□□□□ -1.07
CALD1-203ENST00000393118 Q8N7P7 452 aa8.4□□□□□ -1.07
CALD1-203ENST00000393118 FXYD5Q96DB9 178 aa8.4□□□□□ -1.07
CALD1-203ENST00000393118 MRPL27Q9P0M9 148 aaKnown RBP8.4□□□□□ -1.07
CALD1-203ENST00000393118 DMDP11532 3685 aa8.39□□□□□ -1.07
CALD1-203ENST00000393118 ZNF292O60281 2723 aa8.39□□□□□ -1.07
CALD1-203ENST00000393118 CLEC19AQ6UXS0 136 aa8.39□□□□□ -1.07
CALD1-203ENST00000393118 MRAP2Q96G30 205 aa8.39□□□□□ -1.07
CALD1-203ENST00000393118 PSG8Q9UQ74 426 aa8.39□□□□□ -1.07
CALD1-203ENST00000393118 A0A1B0GUT8 65 aa8.39□□□□□ -1.07
CALD1-203ENST00000393118 SRSF9Q13242 221 aaKnown RBP eCLIP8.39□□□□□ -1.074e-6■■■■□ 19.6
CALD1-203ENST00000393118 BCL6BQ8N143 479 aaPredicted RBP8.39□□□□□ -1.07
CALD1-203ENST00000393118 ZNF479Q96JC4 524 aa8.39□□□□□ -1.07
CALD1-203ENST00000393118 USP9YO00507 2555 aaPredicted RBP8.39□□□□□ -1.07
CALD1-203ENST00000393118 LCNL1Q6ZST4 164 aa8.39□□□□□ -1.07
CALD1-203ENST00000393118 LINC00173Q6ZV60 143 aa8.39□□□□□ -1.07
CALD1-203ENST00000393118 TMEM219Q86XT9 240 aa8.39□□□□□ -1.07
CALD1-203ENST00000393118 ZNF503Q96F45 646 aa8.39□□□□□ -1.07
CALD1-203ENST00000393118 MS4A6AQ9H2W1 248 aa8.39□□□□□ -1.07
CALD1-203ENST00000393118 PTPN13Q12923 2485 aa8.38□□□□□ -1.07
CALD1-203ENST00000393118 GAGE13Q4V321 117 aa8.38□□□□□ -1.07
CALD1-203ENST00000393118 B5MCH6 92 aa8.38□□□□□ -1.07
CALD1-203ENST00000393118 CTRLP40313 264 aa8.38□□□□□ -1.07
CALD1-203ENST00000393118 RPS20P60866 119 aaKnown RBP8.38□□□□□ -1.07
CALD1-203ENST00000393118 PVRIGQ6DKI7 326 aa8.38□□□□□ -1.07
CALD1-203ENST00000393118 FAM167A-AS1Q96KT0 104 aa8.38□□□□□ -1.07
CALD1-203ENST00000393118 CYSLTR1Q9Y271 337 aa8.38□□□□□ -1.07
CALD1-203ENST00000393118 PF4V1P10720 104 aa8.38□□□□□ -1.07
CALD1-203ENST00000393118 TEX29Q8N6K0 151 aa8.38□□□□□ -1.07
CALD1-203ENST00000393118 MYO18BQ8IUG5 2567 aa8.38□□□□□ -1.07
CALD1-203ENST00000393118 IGKV2-40A0A087WW87 121 aaPredicted RBP8.37□□□□□ -1.07
CALD1-203ENST00000393118 IGKV2D-40P01614 121 aaPredicted RBP8.37□□□□□ -1.07
CALD1-203ENST00000393118 IGLV2-23P01705 113 aa8.37□□□□□ -1.07
CALD1-203ENST00000393118 CKS2P33552 79 aa8.37□□□□□ -1.07
CALD1-203ENST00000393118 RHOGP84095 191 aa8.37□□□□□ -1.07
CALD1-203ENST00000393118 SH2D6Q7Z4S9 175 aa8.37□□□□□ -1.07
CALD1-203ENST00000393118 H3BRM9 83 aa8.37□□□□□ -1.07
CALD1-203ENST00000393118 PRTN3P24158 256 aa8.37□□□□□ -1.07
CALD1-203ENST00000393118 PPIFP30405 207 aaKnown RBP8.37□□□□□ -1.07
CALD1-203ENST00000393118 ATP5J2P56134 94 aa8.37□□□□□ -1.07
CALD1-203ENST00000393118 DLX6P56179 175 aa8.37□□□□□ -1.07
CALD1-203ENST00000393118 KHDC1LQ5JSQ8 128 aa8.37□□□□□ -1.07
CALD1-203ENST00000393118 Q8TAT8 98 aa8.37□□□□□ -1.07
CALD1-203ENST00000393118 H7C2G1 150 aa8.37□□□□□ -1.07
CALD1-203ENST00000393118 PSMB2P49721 201 aa8.37□□□□□ -1.07
CALD1-203ENST00000393118 AMTNQ6UX39 209 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms