RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 LMO4P61968 165 aa15.08■□□□□ 0.01
CCDC50-202ENST00000392456 FXYD3Q14802 87 aa15.08■□□□□ 0.01
CCDC50-202ENST00000392456 TIGITQ495A1 244 aa15.08■□□□□ 0.01
CCDC50-202ENST00000392456 TEX45Q8NA69 505 aa15.08■□□□□ 0.01
CCDC50-202ENST00000392456 OR9G1Q8NH87 305 aa15.08■□□□□ 0.01
CCDC50-202ENST00000392456 MAP1LC3CQ9BXW4 147 aa15.08■□□□□ 0.01
CCDC50-202ENST00000392456 RNASE7Q9H1E1 156 aaKnown RBP15.08■□□□□ 0.01
CCDC50-202ENST00000392456 TRAV3A0A0B4J244 114 aa15.08■□□□□ 0
CCDC50-202ENST00000392456 NPIPB5A8MRT5 1133 aa15.07■□□□□ 0
CCDC50-202ENST00000392456 FAM90A26D6RGX4 464 aa15.07■□□□□ 0
CCDC50-202ENST00000392456 PLA2G2AP14555 144 aa15.07■□□□□ 0
CCDC50-202ENST00000392456 GDF5OSQ5U4N7 250 aa15.07■□□□□ 0
CCDC50-202ENST00000392456 ZNF502Q8TBZ5 544 aa15.07■□□□□ 0
CCDC50-202ENST00000392456 GCN1Q92616 2671 aaKnown RBP15.07■□□□□ 0
CCDC50-202ENST00000392456 LINC00311Q8N616 119 aa15.07■□□□□ 0
CCDC50-202ENST00000392456 OR4X2Q8NGF9 303 aa15.07■□□□□ 0
CCDC50-202ENST00000392456 OR9G4Q8NGQ1 327 aa15.07■□□□□ 0
CCDC50-202ENST00000392456 YTHDF2Q9Y5A9 579 aaKnown RBP15.07■□□□□ 0
CCDC50-202ENST00000392456 ZANQ9Y493 2812 aa15.06■□□□□ 0
CCDC50-202ENST00000392456 GAGE12JA6NER3 117 aa15.06■□□□□ 0
CCDC50-202ENST00000392456 SRRM4A7MD48 611 aaKnown RBP15.06■□□□□ 0
CCDC50-202ENST00000392456 FABP5P3A8MUU1 101 aa15.06■□□□□ 0
CCDC50-202ENST00000392456 GAGE7O76087 117 aa15.06■□□□□ 0
CCDC50-202ENST00000392456 IGLV1-47P01700 117 aa15.06■□□□□ 0
CCDC50-202ENST00000392456 GAGE12FP0CL80 117 aa15.06■□□□□ 0
CCDC50-202ENST00000392456 GAGE12GP0CL81 117 aa15.06■□□□□ 0
CCDC50-202ENST00000392456 GAGE12IP0CL82 117 aa15.06■□□□□ 0
CCDC50-202ENST00000392456 PRTN3P24158 256 aa15.06■□□□□ 0
CCDC50-202ENST00000392456 GAGE4Q13068 117 aa15.06■□□□□ 0
CCDC50-202ENST00000392456 SPINK9Q5DT21 86 aa15.06■□□□□ 0
CCDC50-202ENST00000392456 H2BFWTQ7Z2G1 175 aa15.06■□□□□ 0
CCDC50-202ENST00000392456 TRAV25A0A0B4J276 109 aa15.06■□□□□ 0
CCDC50-202ENST00000392456 Q6AWC8 147 aa15.06■□□□□ 0
CCDC50-202ENST00000392456 CHCHD1Q96BP2 118 aaKnown RBP15.06■□□□□ 0
CCDC50-202ENST00000392456 FHL3Q13643 280 aa15.05■□□□□ 0
CCDC50-202ENST00000392456 GCSAMLQ5JQS6 135 aa15.05■□□□□ 0
CCDC50-202ENST00000392456 C8orf31Q8N9H6 132 aa15.05■□□□□ 0
CCDC50-202ENST00000392456 PRO0461Q9UI25 63 aa15.05■□□□□ 0
CCDC50-202ENST00000392456 ARL14EPLP0DKL9 152 aa15.05■□□□□ -0
CCDC50-202ENST00000392456 HIST2H2BCQ6DN03 193 aa15.05■□□□□ -0
CCDC50-202ENST00000392456 IGHV3-72A0A0B4J1Y9 119 aa15.04■□□□□ -0
CCDC50-202ENST00000392456 IGHV4-61A0A0C4DH41 118 aa15.04■□□□□ -0
CCDC50-202ENST00000392456 A0A1W2PRE2 83 aa15.04■□□□□ -0
CCDC50-202ENST00000392456 PMS2P5A8MQ11 134 aa15.04■□□□□ -0
CCDC50-202ENST00000392456 CCDC179H3BU77 68 aa15.04■□□□□ -0
CCDC50-202ENST00000392456 OR5AL1P0C617 328 aa15.04■□□□□ -0
CCDC50-202ENST00000392456 ZFAND6Q6FIF0 208 aa15.04■□□□□ -0
CCDC50-202ENST00000392456 ZDHHC16Q969W1 377 aa15.04■□□□□ -0
CCDC50-202ENST00000392456 PTH2Q96A98 100 aa15.04■□□□□ -0
CCDC50-202ENST00000392456 NABP2Q9BQ15 211 aa15.04■□□□□ -0
CCDC50-202ENST00000392456 INSIG2Q9Y5U4 225 aa15.04■□□□□ -0
CCDC50-202ENST00000392456 IGHV4-30-2A0A087WSY4 118 aa15.03■□□□□ -0
CCDC50-202ENST00000392456 RRHO14718 337 aa15.03■□□□□ -0
CCDC50-202ENST00000392456 FOXI1Q12951 378 aa15.03■□□□□ -0
CCDC50-202ENST00000392456 HCP5Q6MZN7 132 aa15.03■□□□□ -0
CCDC50-202ENST00000392456 OR5AN1Q8NGI8 311 aa15.03■□□□□ -0
CCDC50-202ENST00000392456 FAM168AQ92567 244 aa15.03■□□□□ -0
CCDC50-202ENST00000392456 RITA1Q96K30 269 aa15.03■□□□□ -0
CCDC50-202ENST00000392456 VCX2Q9H322 139 aa15.03■□□□□ -0
CCDC50-202ENST00000392456 PLXNB1O43157 2135 aa15.03■□□□□ -0
CCDC50-202ENST00000392456 TET2Q6N021 2002 aaPredicted RBP15.03■□□□□ -0
CCDC50-202ENST00000392456 SMAD7O15105 426 aaKnown RBP15.03■□□□□ -0
CCDC50-202ENST00000392456 WIPF1O43516 503 aa15.03■□□□□ -0
CCDC50-202ENST00000392456 ZNF137PP52743 207 aa15.03■□□□□ -0
CCDC50-202ENST00000392456 CENPWQ5EE01 88 aa15.03■□□□□ -0
CCDC50-202ENST00000392456 C10orf105Q8TEF2 133 aa15.03■□□□□ -0
CCDC50-202ENST00000392456 PHLDA1Q8WV24 401 aaPredicted RBP15.03■□□□□ -0
CCDC50-202ENST00000392456 ADTRPQ96IZ2 230 aa15.03■□□□□ -0
CCDC50-202ENST00000392456 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.03■□□□□ -0
CCDC50-202ENST00000392456 BUB1B-PAK6H3BSN5 160 aa15.02■□□□□ -0
CCDC50-202ENST00000392456 RBP4P02753 201 aa15.02■□□□□ -0
CCDC50-202ENST00000392456 MYOD1P15172 320 aa15.02■□□□□ -0
CCDC50-202ENST00000392456 CSDC2Q9Y534 153 aaKnown RBP15.02■□□□□ -0
CCDC50-202ENST00000392456 FASNP49327 2511 aaKnown RBP15.02□□□□□ -0.01
CCDC50-202ENST00000392456 IGHG4P01861 327 aa15.02□□□□□ -0.01
CCDC50-202ENST00000392456 KIR2DS2P43631 304 aa15.02□□□□□ -0.01
CCDC50-202ENST00000392456 PRSS29PA6NIE9 313 aa15.01□□□□□ -0.01
CCDC50-202ENST00000392456 E9PLD3 99 aa15.01□□□□□ -0.01
CCDC50-202ENST00000392456 H3BMG7 143 aa15.01□□□□□ -0.01
CCDC50-202ENST00000392456 J3QKU1 62 aa15.01□□□□□ -0.01
CCDC50-202ENST00000392456 APOMO95445 188 aa15.01□□□□□ -0.01
CCDC50-202ENST00000392456 CXorf1O96002 111 aa15.01□□□□□ -0.01
CCDC50-202ENST00000392456 GAGE13Q4V321 117 aa15.01□□□□□ -0.01
CCDC50-202ENST00000392456 ZNF469Q96JG9 3925 aaPredicted RBP15□□□□□ -0.01
CCDC50-202ENST00000392456 M0R1W7 72 aa15□□□□□ -0.01
CCDC50-202ENST00000392456 TAS2R45P59539 299 aa15□□□□□ -0.01
CCDC50-202ENST00000392456 RTL8BQ17RB0 113 aa15□□□□□ -0.01
CCDC50-202ENST00000392456 VMO1Q7Z5L0 202 aa15□□□□□ -0.01
CCDC50-202ENST00000392456 TEX29Q8N6K0 151 aa15□□□□□ -0.01
CCDC50-202ENST00000392456 CITED2Q99967 270 aaPredicted RBP15□□□□□ -0.01
CCDC50-202ENST00000392456 CT45A10P0DMU9 189 aa14.99□□□□□ -0.01
CCDC50-202ENST00000392456 ERVK-16P61578 105 aa14.99□□□□□ -0.01
CCDC50-202ENST00000392456 RPS16P62249 146 aaKnown RBP14.99□□□□□ -0.01
CCDC50-202ENST00000392456 PQLC2Q6ZP29 291 aa14.99□□□□□ -0.01
CCDC50-202ENST00000392456 ATP6V0E2Q8NHE4 81 aa14.99□□□□□ -0.01
CCDC50-202ENST00000392456 PIMREGQ9BSJ6 248 aa14.99□□□□□ -0.01
CCDC50-202ENST00000392456 CENPVL3A0A0U1RRI6 287 aa14.99□□□□□ -0.01
CCDC50-202ENST00000392456 LY6LH3BQJ8 138 aa14.99□□□□□ -0.01
CCDC50-202ENST00000392456 MFAP2P55001 183 aa14.99□□□□□ -0.01
CCDC50-202ENST00000392456 ANXA2RQ3ZCQ2 193 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms