RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 ICAM4Q14773 271 aa18.71■□□□□ 0.59
HOMER3-202ENST00000392351 TRPT1Q86TN4 253 aaKnown RBP18.71■□□□□ 0.59
HOMER3-202ENST00000392351 B9D2Q9BPU9 175 aa18.71■□□□□ 0.59
HOMER3-202ENST00000392351 M0R3E3 92 aa18.7■□□□□ 0.58
HOMER3-202ENST00000392351 FAM74A1Q5RGS3 127 aa18.7■□□□□ 0.58
HOMER3-202ENST00000392351 ALKAL2Q6UX46 152 aa18.7■□□□□ 0.58
HOMER3-202ENST00000392351 SBSPONQ8IVN8 264 aa18.7■□□□□ 0.58
HOMER3-202ENST00000392351 Q9H3A6 140 aa18.7■□□□□ 0.58
HOMER3-202ENST00000392351 TMEM167BQ9NRX6 74 aa18.7■□□□□ 0.58
HOMER3-202ENST00000392351 ZNF705DP0CH99 300 aaPredicted RBP18.69■□□□□ 0.58
HOMER3-202ENST00000392351 ZNF705BP0CI00 300 aaPredicted RBP18.69■□□□□ 0.58
HOMER3-202ENST00000392351 HAGHQ16775 308 aa18.69■□□□□ 0.58
HOMER3-202ENST00000392351 LYPD1Q8N2G4 141 aa18.69■□□□□ 0.58
HOMER3-202ENST00000392351 SUN5Q8TC36 379 aa18.69■□□□□ 0.58
HOMER3-202ENST00000392351 SFT2D1Q8WV19 159 aa18.69■□□□□ 0.58
HOMER3-202ENST00000392351 ASCL2Q99929 193 aa18.69■□□□□ 0.58
HOMER3-202ENST00000392351 TMPRSS5Q9H3S3 457 aa18.69■□□□□ 0.58
HOMER3-202ENST00000392351 NBEAL2Q6ZNJ1 2754 aa18.69■□□□□ 0.58
HOMER3-202ENST00000392351 APOC4P55056 127 aa18.68■□□□□ 0.58
HOMER3-202ENST00000392351 OR4B1Q8NGF8 309 aa18.68■□□□□ 0.58
HOMER3-202ENST00000392351 MRPL53Q96EL3 112 aaKnown RBP18.68■□□□□ 0.58
HOMER3-202ENST00000392351 PRELID1Q9Y255 219 aa18.68■□□□□ 0.58
HOMER3-202ENST00000392351 IGKV3-20P01619 116 aa18.68■□□□□ 0.58
HOMER3-202ENST00000392351 H2AFB1P0C5Y9 115 aa18.68■□□□□ 0.58
HOMER3-202ENST00000392351 OR8A1Q8NGG7 326 aa18.68■□□□□ 0.58
HOMER3-202ENST00000392351 MBD3L1Q8WWY6 194 aa18.68■□□□□ 0.58
HOMER3-202ENST00000392351 PRAC2D3DTV9 90 aa18.67■□□□□ 0.58
HOMER3-202ENST00000392351 HIST1H1AQ02539 215 aaPredicted RBP18.67■□□□□ 0.58
HOMER3-202ENST00000392351 COL7A1Q02388 2944 aa18.67■□□□□ 0.58
HOMER3-202ENST00000392351 KIR2DL5BA0A0G2JN68 375 aa18.66■□□□□ 0.58
HOMER3-202ENST00000392351 KIR2DL5BA0A0G2JPC4 375 aa18.66■□□□□ 0.58
HOMER3-202ENST00000392351 A0A1B0GV50 99 aa18.66■□□□□ 0.58
HOMER3-202ENST00000392351 CNN1P51911 297 aaKnown RBP18.66■□□□□ 0.58
HOMER3-202ENST00000392351 KIR2DL5AQ8N109 375 aa18.66■□□□□ 0.58
HOMER3-202ENST00000392351 KIR2DL5BQ8NHK3 375 aa18.66■□□□□ 0.58
HOMER3-202ENST00000392351 CSTL1Q9H114 145 aa18.65■□□□□ 0.58
HOMER3-202ENST00000392351 OTORQ9NRC9 128 aa18.65■□□□□ 0.58
HOMER3-202ENST00000392351 PGPA6NDG6 321 aa18.64■□□□□ 0.58
HOMER3-202ENST00000392351 DUSP14O95147 198 aaKnown RBP18.64■□□□□ 0.58
HOMER3-202ENST00000392351 OR10J6PQ8NGY7 276 aa18.64■□□□□ 0.57
HOMER3-202ENST00000392351 CA1P00915 261 aaPredicted RBP18.63■□□□□ 0.57
HOMER3-202ENST00000392351 CSN1S1P47710 185 aa18.63■□□□□ 0.57
HOMER3-202ENST00000392351 UBE2G2P60604 165 aa18.63■□□□□ 0.57
HOMER3-202ENST00000392351 CLUHP3Q96NS8 147 aa18.63■□□□□ 0.57
HOMER3-202ENST00000392351 TGP01266 2768 aa18.62■□□□□ 0.57
HOMER3-202ENST00000392351 ZNF705EA8MWA4 302 aaPredicted RBP18.62■□□□□ 0.57
HOMER3-202ENST00000392351 NUTF2P61970 127 aaKnown RBP18.62■□□□□ 0.57
HOMER3-202ENST00000392351 MORN3Q6PF18 240 aaPredicted RBP18.62■□□□□ 0.57
HOMER3-202ENST00000392351 CMTM2Q8TAZ6 248 aa18.62■□□□□ 0.57
HOMER3-202ENST00000392351 A8MTW9 85 aa18.61■□□□□ 0.57
HOMER3-202ENST00000392351 IGKV2-40A0A087WW87 121 aaPredicted RBP18.6■□□□□ 0.57
HOMER3-202ENST00000392351 A0A1W2PRE2 83 aa18.6■□□□□ 0.57
HOMER3-202ENST00000392351 UBE2CO00762 179 aa18.6■□□□□ 0.57
HOMER3-202ENST00000392351 IGKV2D-40P01614 121 aaPredicted RBP18.6■□□□□ 0.57
HOMER3-202ENST00000392351 RXFP4Q8TDU9 374 aa18.6■□□□□ 0.57
HOMER3-202ENST00000392351 SLC35B3Q9H1N7 401 aa18.6■□□□□ 0.57
HOMER3-202ENST00000392351 RPH3ALQ9UNE2 315 aa18.6■□□□□ 0.57
HOMER3-202ENST00000392351 YTHDF2Q9Y5A9 579 aaKnown RBP18.6■□□□□ 0.57
HOMER3-202ENST00000392351 GGTLC3B5MD39 225 aa18.59■□□□□ 0.57
HOMER3-202ENST00000392351 AMTNQ6UX39 209 aa18.59■□□□□ 0.57
HOMER3-202ENST00000392351 TM2D3Q9BRN9 247 aa18.59■□□□□ 0.57
HOMER3-202ENST00000392351 DNAH9Q9NYC9 4486 aa18.59■□□□□ 0.57
HOMER3-202ENST00000392351 TENM3Q9P273 2699 aa18.59■□□□□ 0.57
HOMER3-202ENST00000392351 TRAV1-1A0A0B4J248 108 aa18.59■□□□□ 0.57
HOMER3-202ENST00000392351 SLC25A5P05141 298 aaKnown RBP18.59■□□□□ 0.57
HOMER3-202ENST00000392351 GIG44P09565 113 aaPredicted RBP18.59■□□□□ 0.57
HOMER3-202ENST00000392351 FXYD7P58549 80 aa18.59■□□□□ 0.57
HOMER3-202ENST00000392351 SUMO1P63165 101 aaKnown RBP18.59■□□□□ 0.57
HOMER3-202ENST00000392351 DEFB135Q30KP9 77 aa18.59■□□□□ 0.57
HOMER3-202ENST00000392351 PPP1R14DQ9NXH3 145 aa18.59■□□□□ 0.57
HOMER3-202ENST00000392351 FAM74A7A6NL05 159 aa18.58■□□□□ 0.56
HOMER3-202ENST00000392351 NPIPB6E9PJ23 425 aa18.58■□□□□ 0.56
HOMER3-202ENST00000392351 TEX46H3BTG2 121 aa18.58■□□□□ 0.56
HOMER3-202ENST00000392351 ERCC8Q13216 396 aa18.58■□□□□ 0.56
HOMER3-202ENST00000392351 C5orf17Q8NAS9 161 aa18.58■□□□□ 0.56
HOMER3-202ENST00000392351 DIRC3C9JPN6 131 aa18.57■□□□□ 0.56
HOMER3-202ENST00000392351 HBE1P02100 147 aa18.57■□□□□ 0.56
HOMER3-202ENST00000392351 GNG5P63218 68 aa18.57■□□□□ 0.56
HOMER3-202ENST00000392351 Q6ZWC4 215 aa18.57■□□□□ 0.56
HOMER3-202ENST00000392351 SPATA25Q9BR10 227 aa18.57■□□□□ 0.56
HOMER3-202ENST00000392351 RETNQ9HD89 108 aa18.57■□□□□ 0.56
HOMER3-202ENST00000392351 XCL2Q9UBD3 114 aa18.57■□□□□ 0.56
HOMER3-202ENST00000392351 NHLRC4P0CG21 123 aaPredicted RBP18.56■□□□□ 0.56
HOMER3-202ENST00000392351 CCL20P78556 96 aa18.56■□□□□ 0.56
HOMER3-202ENST00000392351 TEX261Q6UWH6 196 aa18.56■□□□□ 0.56
HOMER3-202ENST00000392351 VGLL1Q99990 258 aa18.56■□□□□ 0.56
HOMER3-202ENST00000392351 ZMAT4Q9H898 229 aa18.56■□□□□ 0.56
HOMER3-202ENST00000392351 SPINK13Q1W4C9 94 aa18.55■□□□□ 0.56
HOMER3-202ENST00000392351 C1QTNF4Q9BXJ3 329 aa18.55■□□□□ 0.56
HOMER3-202ENST00000392351 NKX6-2Q9C056 277 aaPredicted RBP18.55■□□□□ 0.56
HOMER3-202ENST00000392351 M0R2Z0 102 aa18.55■□□□□ 0.56
HOMER3-202ENST00000392351 PAGE4O60829 102 aa18.55■□□□□ 0.56
HOMER3-202ENST00000392351 PPT1P50897 306 aa18.55■□□□□ 0.56
HOMER3-202ENST00000392351 BLOC1S1P78537 153 aa18.55■□□□□ 0.56
HOMER3-202ENST00000392351 CST9LP1Q5W188 147 aa18.55■□□□□ 0.56
HOMER3-202ENST00000392351 C9orf47Q6ZRZ4 202 aa18.55■□□□□ 0.56
HOMER3-202ENST00000392351 GOLT1AQ6ZVE7 132 aa18.55■□□□□ 0.56
HOMER3-202ENST00000392351 ARL6IP6Q8N6S5 226 aa18.55■□□□□ 0.56
HOMER3-202ENST00000392351 AGPAT4-IT1Q9H0P7 198 aa18.55■□□□□ 0.56
HOMER3-202ENST00000392351 ARL2-SNX15V9GYD0 113 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms