RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 ATG2BQ96BY7 2078 aa0.82□□□□□ -2.28
SNORA48.1-201ENST00000390879 CPDO75976 1380 aa0.82□□□□□ -2.28
SNORA48.1-201ENST00000390879 ADAMTS7Q9UKP4 1686 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 FAM135BQ49AJ0 1406 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 ZNF638Q14966 1978 aaKnown RBP0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 ARHGEF28Q8N1W1 1705 aaKnown RBP0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 ZNF727A8MUV8 499 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 M0R129 80 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 CCL16O15467 120 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 CD14P08571 375 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 IGLC6P0CF74 106 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 SAA1P0DJI8 122 aaPredicted RBP0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 LINC00694P0DN24 101 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 EVI2AP22794 236 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 CKS2P33552 79 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 AKR1D1P51857 326 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 KRTAP12-3P60328 96 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 MIR22HGQ0VDD5 57 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 DEFB115Q30KQ5 88 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 CLLU1Q5K131 121 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 GLYATL3Q5SZD4 288 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 GLIPR1L1Q6UWM5 242 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 FOXI2Q6ZQN5 318 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 ZCCHC23Q6ZST2 131 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 OR5AS1Q8N127 324 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 LINC00269Q8N2A0 174 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 OR4S1Q8NGB4 309 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 C4orf3Q8WVX3 66 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 LINC00052Q96N35 136 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 NAA38Q9BRA0 125 aaKnown RBP0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 LPAR5Q9H1C0 372 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 TPT1P8Q9HAU6 139 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 ORMDL1Q9P0S3 153 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 SNURFQ9Y675 71 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 KIAA1107Q9UPP5 1409 aa0.81□□□□□ -2.28
SNORA48.1-201ENST00000390879 TCOF1Q13428 1488 aaKnown RBP0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 KIF1BO60333 1816 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 FRMPD1Q5SYB0 1578 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 VWDEQ8N2E2 1590 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 IGHV1-24A0A0C4DH33 117 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 FAM236AA0A1B0GUQ0 79 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 FAM236BA0A1B0GV22 79 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 H3BRM9 83 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 CCL25O15444 150 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 MRPS14O60783 128 aaKnown RBP0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 EDF1O60869 148 aaKnown RBP0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 KLF7O75840 302 aaPredicted RBP0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 HLA-DRB4P13762 266 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 HIST1H1BP16401 226 aaKnown RBP0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 ZNF25P17030 456 aaPredicted RBP0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 KDELR1P24390 212 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 ETV6P41212 452 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 NCS1P62166 190 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 QRFPP83859 136 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 NEDD8Q15843 81 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 SPRNQ5BIV9 151 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 CASC2Q6XLA1 102 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 TMEM91Q6ZNR0 172 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 CTAGE3PQ8IX95 158 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 C10orf111Q8N326 155 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 MMGT1Q8N4V1 131 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 C5orf17Q8NAS9 161 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 OTOSQ8NHW6 89 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 PATE1Q8WXA2 126 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 PSMF1Q92530 271 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 MAGOHBQ96A72 148 aaKnown RBP0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 SMIM7Q9BQ49 75 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 DNAJC15Q9Y5T4 150 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 SOX21Q9Y651 276 aaPredicted RBP0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 HLA-DRB4X5D2U9 266 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 SDK2Q58EX2 2172 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 ECM29Q5VYK3 1845 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 MYO16Q9Y6X6 1858 aa0.8□□□□□ -2.28
SNORA48.1-201ENST00000390879 TRBV6-7A0A0A0MS04 114 aa0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 IGKV3D-7A0A0C4DH55 119 aa0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 IGKV3OR2-268A0A0C4DH90 116 aa0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 TRBV6-4A0A1B0GX49 114 aa0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 BBIP1A8MTZ0 92 aa0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 CDC42EP2O14613 210 aa0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 HCRTO43612 131 aa0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 CD3DP04234 171 aa0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 PRB4P10163 310 aaPredicted RBP0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 CCL4P13236 92 aa0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 COX7CP15954 63 aa0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 COPZ1P61923 177 aa0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 RPS25P62851 125 aaKnown RBP0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 MPV17LQ2QL34 196 aa0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 KRTAP26-1Q6PEX3 210 aa0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 CIB3Q96Q77 187 aaPredicted RBP0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 MED9Q9NWA0 146 aa0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 LSM2Q9Y333 95 aaKnown RBP0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 ZNF106Q9H2Y7 1883 aaKnown RBP0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 NYNRINQ9P2P1 1898 aaKnown RBP0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 SCN9AQ15858 1988 aa0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 KDM6AO15550 1401 aaPredicted RBP0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 TNS3Q68CZ2 1445 aa0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 SYNJ1O43426 1573 aa0.79□□□□□ -2.28
SNORA48.1-201ENST00000390879 ZCCHC11Q5TAX3 1644 aaKnown RBP0.78□□□□□ -2.28
SNORA48.1-201ENST00000390879 TRAV23DV6A0A075B6W5 121 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms