RNA–Protein interactions for RNA: ENST00000390436.2

TRAV13-1-201, Transcript of T cell receptor alpha variable 13-1, humanhuman

APPRIS P1 BASIC

Gene TRAV13-1, Length 360 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1-201ENST00000390436 RPUSD4Q96CM3 377 aaKnown RBP4.41□□□□□ -1.7
TRAV13-1-201ENST00000390436 DAZAP1Q96EP5 407 aaKnown RBP4.41□□□□□ -1.7
TRAV13-1-201ENST00000390436 C16orf74Q96GX8 76 aa4.41□□□□□ -1.7
TRAV13-1-201ENST00000390436 SLC35E1Q96K37 410 aa4.41□□□□□ -1.7
TRAV13-1-201ENST00000390436 SHANK2-AS3Q9BTD1 123 aa4.41□□□□□ -1.7
TRAV13-1-201ENST00000390436 GSN-AS1Q9NRJ2 163 aa4.41□□□□□ -1.7
TRAV13-1-201ENST00000390436 U3KQ87 197 aa4.41□□□□□ -1.7
TRAV13-1-201ENST00000390436 TRAV5A0A0B4J249 113 aa4.4□□□□□ -1.71
TRAV13-1-201ENST00000390436 TRAV12-3A0A0B4J271 114 aa4.4□□□□□ -1.71
TRAV13-1-201ENST00000390436 LOC100131303A0A0U1RQF7 123 aa4.4□□□□□ -1.71
TRAV13-1-201ENST00000390436 KRTAP29-1A8MX34 341 aaPredicted RBP4.4□□□□□ -1.71
TRAV13-1-201ENST00000390436 WRBO00258 174 aa4.4□□□□□ -1.71
TRAV13-1-201ENST00000390436 SIVA1O15304 175 aa4.4□□□□□ -1.71
TRAV13-1-201ENST00000390436 DUSP14O95147 198 aaKnown RBP4.4□□□□□ -1.71
TRAV13-1-201ENST00000390436 SMIM18P0DKX4 95 aa4.4□□□□□ -1.71
TRAV13-1-201ENST00000390436 AKR1C4P17516 323 aa4.4□□□□□ -1.71
TRAV13-1-201ENST00000390436 GALR1P47211 349 aa4.4□□□□□ -1.71
TRAV13-1-201ENST00000390436 CCR6P51684 374 aa4.4□□□□□ -1.71
TRAV13-1-201ENST00000390436 CD300CQ08708 224 aa4.4□□□□□ -1.71
TRAV13-1-201ENST00000390436 SPCS2Q15005 226 aa4.4□□□□□ -1.71
TRAV13-1-201ENST00000390436 TTC32Q5I0X7 151 aa4.4□□□□□ -1.71
TRAV13-1-201ENST00000390436 LYPD5Q6UWN5 251 aa4.4□□□□□ -1.71
TRAV13-1-201ENST00000390436 ACOT7LQ6ZUV0 252 aa4.4□□□□□ -1.71
TRAV13-1-201ENST00000390436 CROCCP3Q8IVE0 287 aa4.4□□□□□ -1.71
TRAV13-1-201ENST00000390436 ZNF431Q8TF32 576 aaPredicted RBP4.4□□□□□ -1.71
TRAV13-1-201ENST00000390436 ZNF331Q9NQX6 463 aaPredicted RBP4.4□□□□□ -1.71
TRAV13-1-201ENST00000390436 PAIP2BQ9ULR5 123 aaKnown RBP4.4□□□□□ -1.71
TRAV13-1-201ENST00000390436 LRP2P98164 4655 aa4.39□□□□□ -1.71
TRAV13-1-201ENST00000390436 A0A087X0K7 114 aa4.39□□□□□ -1.71
TRAV13-1-201ENST00000390436 A0A0B4J2A0 478 aa4.39□□□□□ -1.71
TRAV13-1-201ENST00000390436 SMIM31A0A1B0GVY4 71 aa4.39□□□□□ -1.71
TRAV13-1-201ENST00000390436 GABARAPH6UMI1 98 aa4.39□□□□□ -1.71
TRAV13-1-201ENST00000390436 PRAF2O60831 178 aa4.39□□□□□ -1.71
TRAV13-1-201ENST00000390436 ZNF324O75467 553 aaPredicted RBP4.39□□□□□ -1.71
TRAV13-1-201ENST00000390436 ATG12O94817 140 aa4.39□□□□□ -1.71
TRAV13-1-201ENST00000390436 GABARAPO95166 117 aa4.39□□□□□ -1.71
TRAV13-1-201ENST00000390436 CDKN1BP46527 198 aa4.39□□□□□ -1.71
TRAV13-1-201ENST00000390436 TAS2R19P59542 299 aa4.39□□□□□ -1.71
TRAV13-1-201ENST00000390436 BTN1A1Q13410 526 aa4.39□□□□□ -1.71
TRAV13-1-201ENST00000390436 OR1S1Q8NH92 325 aa4.39□□□□□ -1.71
TRAV13-1-201ENST00000390436 SMIM4Q8WVI0 70 aa4.39□□□□□ -1.71
TRAV13-1-201ENST00000390436 TMEM37Q8WXS4 190 aa4.39□□□□□ -1.71
TRAV13-1-201ENST00000390436 SAT2Q96F10 170 aaPredicted RBP4.39□□□□□ -1.71
TRAV13-1-201ENST00000390436 MRPL16Q9NX20 251 aaKnown RBP4.39□□□□□ -1.71
TRAV13-1-201ENST00000390436 SHPKQ9UHJ6 478 aa4.39□□□□□ -1.71
TRAV13-1-201ENST00000390436 C14orf166Q9Y224 244 aaKnown RBP4.39□□□□□ -1.71
TRAV13-1-201ENST00000390436 ANKRD20A5PA0PJZ0 165 aa4.38□□□□□ -1.71
TRAV13-1-201ENST00000390436 H3BNG1 76 aa4.38□□□□□ -1.71
TRAV13-1-201ENST00000390436 M0R3E3 92 aa4.38□□□□□ -1.71
TRAV13-1-201ENST00000390436 ADAP1O75689 374 aa4.38□□□□□ -1.71
TRAV13-1-201ENST00000390436 TNFAIP8O95379 198 aa4.38□□□□□ -1.71
TRAV13-1-201ENST00000390436 SFTA3P0C7M3 94 aa4.38□□□□□ -1.71
TRAV13-1-201ENST00000390436 LINC00869P0C866 280 aa4.38□□□□□ -1.71
TRAV13-1-201ENST00000390436 TBPP20226 339 aa4.38□□□□□ -1.71
TRAV13-1-201ENST00000390436 MEOX2P50222 304 aa4.38□□□□□ -1.71
TRAV13-1-201ENST00000390436 PLP1P60201 277 aa4.38□□□□□ -1.71
TRAV13-1-201ENST00000390436 ERVFC1-1P60608 527 aa4.38□□□□□ -1.71
TRAV13-1-201ENST00000390436 SLC38A11Q08AI6 406 aa4.38□□□□□ -1.71
TRAV13-1-201ENST00000390436 ZNF493Q6ZR52 646 aa4.38□□□□□ -1.71
TRAV13-1-201ENST00000390436 CYP2G1PQ6ZSU1 146 aa4.38□□□□□ -1.71
TRAV13-1-201ENST00000390436 CLVS1Q8IUQ0 354 aaPredicted RBP4.38□□□□□ -1.71
TRAV13-1-201ENST00000390436 OR4D5Q8NGN0 318 aa4.38□□□□□ -1.71
TRAV13-1-201ENST00000390436 DNAJC30Q96LL9 226 aa4.38□□□□□ -1.71
TRAV13-1-201ENST00000390436 FAM19A4Q96LR4 140 aa4.38□□□□□ -1.71
TRAV13-1-201ENST00000390436 SOSTQ9BQB4 213 aa4.38□□□□□ -1.71
TRAV13-1-201ENST00000390436 RNF213Q63HN8 5207 aa4.38□□□□□ -1.71
TRAV13-1-201ENST00000390436 H7BYZ3 331 aa4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 SPINK4O60575 86 aa4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 SCGB2A1O75556 95 aa4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 NDUFB4O95168 129 aa4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 OR5G3P0C626 314 aa4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 IGLC2P0DOY2 106 aa4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 ZNF182P17025 639 aaPredicted RBP4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 NUP62P37198 522 aaPredicted RBP4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 CRYBA4P53673 196 aa4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 RRAS2P62070 204 aaPredicted RBP4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 POLR2GP62487 172 aaKnown RBP eCLIP4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 DAZ2Q13117 558 aaKnown RBP4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 PPP1R1AQ13522 171 aa4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 OPCMLQ14982 345 aa4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 SURF2Q15527 256 aaPredicted RBP4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 SPANXN5Q5MJ07 72 aa4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 SUMO4Q6EEV6 95 aa4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 Q6ZSA8 131 aa4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 CCDC190Q86UF4 302 aa4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 TMEM256Q8N2U0 113 aa4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 BPIFCQ8NFQ6 507 aa4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 ZNF479Q96JC4 524 aa4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 LINC00467Q9BRT7 94 aa4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 TMEM147Q9BVK8 224 aa4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 VCX3BQ9H321 246 aa4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 FUT9Q9Y231 359 aa4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 HIGD1AQ9Y241 93 aa4.37□□□□□ -1.71
TRAV13-1-201ENST00000390436 TRGV1A0A0A0MS02 117 aa4.36□□□□□ -1.71
TRAV13-1-201ENST00000390436 SYNGR2O43760 224 aa4.36□□□□□ -1.71
TRAV13-1-201ENST00000390436 B3GALNT1O75752 331 aa4.36□□□□□ -1.71
TRAV13-1-201ENST00000390436 RLN2P04090 185 aa4.36□□□□□ -1.71
TRAV13-1-201ENST00000390436 HOXB5P09067 269 aa4.36□□□□□ -1.71
TRAV13-1-201ENST00000390436 AKAIN1P0CW23 69 aa4.36□□□□□ -1.71
TRAV13-1-201ENST00000390436 MT1HL1P0DM35 61 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms