RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 SPTBN1Q01082 2364 aaKnown RBP14□□□□□ -0.17
SQSTM1-202ENST00000389805 CD3EP07766 207 aa14□□□□□ -0.17
SQSTM1-202ENST00000389805 MRGPRG-AS1Q2M3A8 158 aa14□□□□□ -0.17
SQSTM1-202ENST00000389805 A0A1W2PPI3 338 aa14□□□□□ -0.17
SQSTM1-202ENST00000389805 FABP2P12104 132 aa14□□□□□ -0.17
SQSTM1-202ENST00000389805 GCSHP23434 173 aa14□□□□□ -0.17
SQSTM1-202ENST00000389805 ADAMTSL5Q6ZMM2 481 aa14□□□□□ -0.17
SQSTM1-202ENST00000389805 VKORC1Q9BQB6 163 aa14□□□□□ -0.17
SQSTM1-202ENST00000389805 GFRA4Q9GZZ7 299 aa14□□□□□ -0.17
SQSTM1-202ENST00000389805 K7ERJ3 54 aa13.99□□□□□ -0.17
SQSTM1-202ENST00000389805 IGFBPL1Q8WX77 278 aa13.99□□□□□ -0.17
SQSTM1-202ENST00000389805 TMEM133Q9H2Q1 129 aa13.99□□□□□ -0.17
SQSTM1-202ENST00000389805 KAAG1Q9UBP8 84 aa13.99□□□□□ -0.17
SQSTM1-202ENST00000389805 TMSB15BA0A087X1C1 80 aa13.99□□□□□ -0.17
SQSTM1-202ENST00000389805 FCGR2BP31994 310 aaPredicted RBP13.99□□□□□ -0.17
SQSTM1-202ENST00000389805 SAMD5Q5TGI4 173 aa13.99□□□□□ -0.17
SQSTM1-202ENST00000389805 Q86TA4 180 aa13.99□□□□□ -0.17
SQSTM1-202ENST00000389805 LINC00311Q8N616 119 aa13.99□□□□□ -0.17
SQSTM1-202ENST00000389805 D6R8Y8 96 aa13.98□□□□□ -0.17
SQSTM1-202ENST00000389805 TNFRSF14Q92956 283 aa13.98□□□□□ -0.17
SQSTM1-202ENST00000389805 COX7A1P24310 79 aa13.98□□□□□ -0.17
SQSTM1-202ENST00000389805 SIGLEC8Q9NYZ4 499 aa13.98□□□□□ -0.17
SQSTM1-202ENST00000389805 HRNRQ86YZ3 2850 aaPredicted RBP13.98□□□□□ -0.17
SQSTM1-202ENST00000389805 B9A039 149 aa13.97□□□□□ -0.17
SQSTM1-202ENST00000389805 ATP5IP56385 69 aaPredicted RBP13.97□□□□□ -0.17
SQSTM1-202ENST00000389805 OR5A1Q8NGJ0 315 aa13.97□□□□□ -0.17
SQSTM1-202ENST00000389805 OVOL3O00110 214 aa13.97□□□□□ -0.17
SQSTM1-202ENST00000389805 GP9P14770 177 aa13.97□□□□□ -0.17
SQSTM1-202ENST00000389805 STXBP6Q8NFX7 210 aa13.97□□□□□ -0.17
SQSTM1-202ENST00000389805 RALYQ9UKM9 306 aaKnown RBP13.97□□□□□ -0.17
SQSTM1-202ENST00000389805 ZNF785A8K8V0 405 aa13.96□□□□□ -0.17
SQSTM1-202ENST00000389805 RIGQ13278 110 aa13.96□□□□□ -0.17
SQSTM1-202ENST00000389805 C18orf15Q96N68 181 aa13.96□□□□□ -0.17
SQSTM1-202ENST00000389805 DKK2Q9UBU2 259 aa13.96□□□□□ -0.17
SQSTM1-202ENST00000389805 NPIPB6E9PJ23 425 aa13.96□□□□□ -0.17
SQSTM1-202ENST00000389805 FXYD2P54710 66 aa13.96□□□□□ -0.17
SQSTM1-202ENST00000389805 PSG3Q16557 428 aa13.96□□□□□ -0.17
SQSTM1-202ENST00000389805 VMA21Q3ZAQ7 101 aa13.96□□□□□ -0.17
SQSTM1-202ENST00000389805 TSSC4Q9Y5U2 329 aaPredicted RBP13.96□□□□□ -0.17
SQSTM1-202ENST00000389805 AMN1Q8IY45 258 aa13.95□□□□□ -0.18
SQSTM1-202ENST00000389805 ZNF414Q96IQ9 312 aa13.95□□□□□ -0.18
SQSTM1-202ENST00000389805 RAXQ9Y2V3 346 aa13.95□□□□□ -0.18
SQSTM1-202ENST00000389805 TMEM213A2RRL7 107 aa13.95□□□□□ -0.18
SQSTM1-202ENST00000389805 SMKR1H3BMG3 65 aa13.95□□□□□ -0.18
SQSTM1-202ENST00000389805 CCL21O00585 134 aa13.95□□□□□ -0.18
SQSTM1-202ENST00000389805 SUB1P53999 127 aaKnown RBP eCLIP13.95□□□□□ -0.183e-7■■■■□ 26.7
SQSTM1-202ENST00000389805 LYZP61626 148 aa13.95□□□□□ -0.18
SQSTM1-202ENST00000389805 MTURNQ8N3F0 131 aa13.95□□□□□ -0.18
SQSTM1-202ENST00000389805 THAP8Q8NA92 274 aa13.95□□□□□ -0.18
SQSTM1-202ENST00000389805 C8orf31Q8N9H6 132 aa13.95□□□□□ -0.18
SQSTM1-202ENST00000389805 OR9G4Q8NGQ1 327 aa13.95□□□□□ -0.18
SQSTM1-202ENST00000389805 SIGMAR1Q99720 223 aa13.95□□□□□ -0.18
SQSTM1-202ENST00000389805 A0A1W2PRD5 423 aa13.94□□□□□ -0.18
SQSTM1-202ENST00000389805 A0A1W2PRF3 423 aa13.94□□□□□ -0.18
SQSTM1-202ENST00000389805 A0A1W2PRM7 423 aa13.94□□□□□ -0.18
SQSTM1-202ENST00000389805 IGLV2-11P01706 119 aa13.94□□□□□ -0.18
SQSTM1-202ENST00000389805 SMIM13P0DJ93 91 aa13.94□□□□□ -0.18
SQSTM1-202ENST00000389805 MC5RP33032 325 aa13.94□□□□□ -0.18
SQSTM1-202ENST00000389805 BCL6BQ8N143 479 aaPredicted RBP13.94□□□□□ -0.18
SQSTM1-202ENST00000389805 C17orf77Q96MU5 243 aa13.94□□□□□ -0.18
SQSTM1-202ENST00000389805 OR4X2Q8NGF9 303 aa13.94□□□□□ -0.18
SQSTM1-202ENST00000389805 IGLV1-47P01700 117 aa13.93□□□□□ -0.18
SQSTM1-202ENST00000389805 INS-IGF2F8WCM5 200 aa13.93□□□□□ -0.18
SQSTM1-202ENST00000389805 LGALS9BQ3B8N2 356 aa13.93□□□□□ -0.18
SQSTM1-202ENST00000389805 LGALS9CQ6DKI2 356 aa13.93□□□□□ -0.18
SQSTM1-202ENST00000389805 PRELID3AQ96N28 172 aa13.93□□□□□ -0.18
SQSTM1-202ENST00000389805 IGHV1-3A0A0C4DH29 117 aa13.92□□□□□ -0.18
SQSTM1-202ENST00000389805 ZNF672Q499Z4 452 aaPredicted RBP13.92□□□□□ -0.18
SQSTM1-202ENST00000389805 WNK2Q9Y3S1 2297 aa13.92□□□□□ -0.18
SQSTM1-202ENST00000389805 IGKV2D-26A0A0A0MRZ7 120 aa13.92□□□□□ -0.18
SQSTM1-202ENST00000389805 BUB1B-PAK6H3BSN5 160 aa13.92□□□□□ -0.18
SQSTM1-202ENST00000389805 WFDC2Q14508 124 aa13.92□□□□□ -0.18
SQSTM1-202ENST00000389805 IFI27L1Q96BM0 104 aa13.92□□□□□ -0.18
SQSTM1-202ENST00000389805 FBXL15Q9H469 300 aa13.92□□□□□ -0.18
SQSTM1-202ENST00000389805 SMIM17P0DL12 118 aa13.92□□□□□ -0.18
SQSTM1-202ENST00000389805 COL25A1Q9BXS0 654 aaPredicted RBP13.92□□□□□ -0.18
SQSTM1-202ENST00000389805 SH2D6Q7Z4S9 175 aa13.91□□□□□ -0.18
SQSTM1-202ENST00000389805 NHP2Q9NX24 153 aaKnown RBP13.91□□□□□ -0.18
SQSTM1-202ENST00000389805 SIGLEC9Q9Y336 463 aa13.91□□□□□ -0.18
SQSTM1-202ENST00000389805 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.91□□□□□ -0.18
SQSTM1-202ENST00000389805 RPL27AP46776 148 aaKnown RBP13.91□□□□□ -0.18
SQSTM1-202ENST00000389805 WFDC12Q8WWY7 111 aa13.91□□□□□ -0.18
SQSTM1-202ENST00000389805 CRIP1P50238 77 aa13.9□□□□□ -0.18
SQSTM1-202ENST00000389805 DPF1Q92782 380 aa13.9□□□□□ -0.18
SQSTM1-202ENST00000389805 ONECUT1Q9UBC0 465 aa13.9□□□□□ -0.18
SQSTM1-202ENST00000389805 GAGE12HA6NDE8 117 aa13.9□□□□□ -0.18
SQSTM1-202ENST00000389805 LYZL1Q6UWQ5 148 aa13.89□□□□□ -0.19
SQSTM1-202ENST00000389805 C8orf49Q96NF6 230 aa13.89□□□□□ -0.19
SQSTM1-202ENST00000389805 OTORQ9NRC9 128 aa13.89□□□□□ -0.19
SQSTM1-202ENST00000389805 HIGD1AQ9Y241 93 aa13.89□□□□□ -0.19
SQSTM1-202ENST00000389805 HBDP02042 147 aa13.89□□□□□ -0.19
SQSTM1-202ENST00000389805 C8orf46Q8TAG6 207 aa13.89□□□□□ -0.19
SQSTM1-202ENST00000389805 RPEQ96AT9 228 aa13.89□□□□□ -0.19
SQSTM1-202ENST00000389805 M0R3E3 92 aa13.89□□□□□ -0.19
SQSTM1-202ENST00000389805 CRYGBP07316 175 aa13.89□□□□□ -0.19
SQSTM1-202ENST00000389805 PPP1R27Q86WC6 154 aa13.89□□□□□ -0.19
SQSTM1-202ENST00000389805 VGLL1Q99990 258 aa13.89□□□□□ -0.19
SQSTM1-202ENST00000389805 MSRB2Q9Y3D2 182 aa13.89□□□□□ -0.19
SQSTM1-202ENST00000389805 NDUFS7O75251 213 aa13.88□□□□□ -0.19
SQSTM1-202ENST00000389805 ADORA2A-AS1P86434 159 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms