RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 OTOGLQ3ZCN5 2332 aa8.18□□□□□ -1.1
PKP4-201ENST00000389757 C14orf178Q8N769 122 aaPredicted RBP8.18□□□□□ -1.1
PKP4-201ENST00000389757 ATRAIDQ6UW56 229 aa8.18□□□□□ -1.1
PKP4-201ENST00000389757 TMEM242Q9NWH2 141 aa8.18□□□□□ -1.1
PKP4-201ENST00000389757 COL4A4P53420 1690 aaPredicted RBP8.18□□□□□ -1.1
PKP4-201ENST00000389757 C8orf86Q6ZUL3 223 aa8.18□□□□□ -1.1
PKP4-201ENST00000389757 OR5A1Q8NGJ0 315 aa8.18□□□□□ -1.1
PKP4-201ENST00000389757 PSCAO43653 123 aa8.17□□□□□ -1.1
PKP4-201ENST00000389757 WISP2O76076 250 aa8.17□□□□□ -1.1
PKP4-201ENST00000389757 DAD1P61803 113 aa8.17□□□□□ -1.1
PKP4-201ENST00000389757 LAGE3Q14657 143 aa8.17□□□□□ -1.1
PKP4-201ENST00000389757 GAGE10A6NGK3 116 aa8.17□□□□□ -1.1
PKP4-201ENST00000389757 D6R8Y8 96 aa8.17□□□□□ -1.1
PKP4-201ENST00000389757 TRBV19A0A075B6N1 114 aa8.17□□□□□ -1.1
PKP4-201ENST00000389757 IGHV7-4-1A0A0J9YVY3 117 aa8.17□□□□□ -1.1
PKP4-201ENST00000389757 A0A1B0GUS0 222 aa8.17□□□□□ -1.1
PKP4-201ENST00000389757 VCYO14598 125 aa8.17□□□□□ -1.1
PKP4-201ENST00000389757 FOXL1Q12952 345 aa8.17□□□□□ -1.1
PKP4-201ENST00000389757 LINC00469Q8N7U9 141 aa8.17□□□□□ -1.1
PKP4-201ENST00000389757 FGF23Q9GZV9 251 aaPredicted RBP8.17□□□□□ -1.1
PKP4-201ENST00000389757 CHCHD1Q96BP2 118 aaKnown RBP8.17□□□□□ -1.1
PKP4-201ENST00000389757 PLXNB3Q9ULL4 1909 aa8.17□□□□□ -1.1
PKP4-201ENST00000389757 DPM2O94777 84 aa8.16□□□□□ -1.1
PKP4-201ENST00000389757 CHTOPQ9Y3Y2 248 aaKnown RBP8.16□□□□□ -1.1
PKP4-201ENST00000389757 RBMY1BA6NDE4 496 aaKnown RBP8.16□□□□□ -1.1
PKP4-201ENST00000389757 RBMY1EA6NEQ0 496 aaKnown RBP8.16□□□□□ -1.1
PKP4-201ENST00000389757 RBMY1DP0C7P1 496 aaKnown RBP8.16□□□□□ -1.1
PKP4-201ENST00000389757 ARMS2P0C7Q2 107 aa8.16□□□□□ -1.1
PKP4-201ENST00000389757 RBMY1A1P0DJD3 496 aaKnown RBP8.16□□□□□ -1.1
PKP4-201ENST00000389757 RBMY1CP0DJD4 496 aa8.16□□□□□ -1.1
PKP4-201ENST00000389757 RASL11AQ6T310 242 aa8.16□□□□□ -1.1
PKP4-201ENST00000389757 TRBV7-9A0A0J9YWB2 115 aa8.16□□□□□ -1.1
PKP4-201ENST00000389757 PAX9P55771 341 aa8.16□□□□□ -1.1
PKP4-201ENST00000389757 TMEM75Q8N9X5 138 aa8.16□□□□□ -1.1
PKP4-201ENST00000389757 COL4A3Q01955 1670 aa8.16□□□□□ -1.1
PKP4-201ENST00000389757 A0A087WWL8 130 aa8.16□□□□□ -1.1
PKP4-201ENST00000389757 F5H768 121 aa8.16□□□□□ -1.1
PKP4-201ENST00000389757 NIT1Q86X76 327 aa8.16□□□□□ -1.1
PKP4-201ENST00000389757 H3BRN7 92 aa8.16□□□□□ -1.1
PKP4-201ENST00000389757 FAM90A2PQ658T7 463 aa8.16□□□□□ -1.1
PKP4-201ENST00000389757 CCL24O00175 119 aa8.15□□□□□ -1.1
PKP4-201ENST00000389757 RHODO00212 210 aa8.15□□□□□ -1.1
PKP4-201ENST00000389757 LGALS1P09382 135 aaKnown RBP8.15□□□□□ -1.1
PKP4-201ENST00000389757 IGLC1P0CG04 106 aa8.15□□□□□ -1.1
PKP4-201ENST00000389757 SPG11Q96JI7 2443 aa8.15□□□□□ -1.1
PKP4-201ENST00000389757 IFI27L1Q96BM0 104 aa8.15□□□□□ -1.1
PKP4-201ENST00000389757 TRBV24-1A0A075B6N3 115 aa8.15□□□□□ -1.1
PKP4-201ENST00000389757 SNAI2O43623 268 aa8.15□□□□□ -1.1
PKP4-201ENST00000389757 NUP35Q8NFH5 326 aa8.15□□□□□ -1.1
PKP4-201ENST00000389757 PFN1P07737 140 aaKnown RBP8.15□□□□□ -1.11
PKP4-201ENST00000389757 SMIM13P0DJ93 91 aa8.15□□□□□ -1.11
PKP4-201ENST00000389757 LINC00479Q96M42 142 aa8.15□□□□□ -1.11
PKP4-201ENST00000389757 MS4A6AQ9H2W1 248 aa8.15□□□□□ -1.11
PKP4-201ENST00000389757 HOXD3P31249 432 aaPredicted RBP8.14□□□□□ -1.11
PKP4-201ENST00000389757 CDKN1BP46527 198 aa8.14□□□□□ -1.11
PKP4-201ENST00000389757 CKS1BP61024 79 aa8.14□□□□□ -1.11
PKP4-201ENST00000389757 FOXE3Q13461 319 aa8.14□□□□□ -1.11
PKP4-201ENST00000389757 C14orf144Q96I85 54 aa8.14□□□□□ -1.11
PKP4-201ENST00000389757 DDTP30046 118 aa8.14□□□□□ -1.11
PKP4-201ENST00000389757 TMEM95Q3KNT9 176 aa8.14□□□□□ -1.11
PKP4-201ENST00000389757 LINC01559Q495D7 138 aa8.14□□□□□ -1.11
PKP4-201ENST00000389757 Q6ZSR3 168 aa8.14□□□□□ -1.11
PKP4-201ENST00000389757 LSM4Q9Y4Z0 139 aaKnown RBP8.14□□□□□ -1.11
PKP4-201ENST00000389757 KNCNA6PVL3 124 aa8.14□□□□□ -1.11
PKP4-201ENST00000389757 CSTL1Q9H114 145 aa8.14□□□□□ -1.11
PKP4-201ENST00000389757 MRPL16Q9NX20 251 aaKnown RBP8.14□□□□□ -1.11
PKP4-201ENST00000389757 TMEM14CQ9P0S9 112 aa8.14□□□□□ -1.11
PKP4-201ENST00000389757 KLK9Q9UKQ9 250 aa8.14□□□□□ -1.11
PKP4-201ENST00000389757 IGHV1OR15-1A0A075B7D0 117 aa8.14□□□□□ -1.11
PKP4-201ENST00000389757 SEC11AP67812 179 aa8.14□□□□□ -1.11
PKP4-201ENST00000389757 TEX43Q6ZNM6 134 aa8.14□□□□□ -1.11
PKP4-201ENST00000389757 C1orf159Q96HA4 380 aa8.14□□□□□ -1.11
PKP4-201ENST00000389757 SLC25A2Q9BXI2 301 aa8.14□□□□□ -1.11
PKP4-201ENST00000389757 ST6GALNAC6Q969X2 333 aa8.14□□□□□ -1.11
PKP4-201ENST00000389757 THAP8Q8NA92 274 aa8.13□□□□□ -1.11
PKP4-201ENST00000389757 PHLDA1Q8WV24 401 aaPredicted RBP8.13□□□□□ -1.11
PKP4-201ENST00000389757 ARFGEF3Q5TH69 2177 aa8.13□□□□□ -1.11
PKP4-201ENST00000389757 IGLC7A0M8Q6 106 aa8.13□□□□□ -1.11
PKP4-201ENST00000389757 TMEM86BQ8N661 226 aa8.13□□□□□ -1.11
PKP4-201ENST00000389757 ZMAT4Q9H898 229 aa8.13□□□□□ -1.11
PKP4-201ENST00000389757 ANKHD1Q8IWZ3 2542 aaKnown RBP8.13□□□□□ -1.11
PKP4-201ENST00000389757 DEFB104AQ8WTQ1 72 aa8.13□□□□□ -1.11
PKP4-201ENST00000389757 WIPF3A6NGB9 483 aa8.13□□□□□ -1.11
PKP4-201ENST00000389757 CFHR3Q02985 330 aa8.13□□□□□ -1.11
PKP4-201ENST00000389757 SMPXQ9UHP9 88 aa8.13□□□□□ -1.11
PKP4-201ENST00000389757 IGKCP01834 107 aa8.12□□□□□ -1.11
PKP4-201ENST00000389757 BLCAPP62952 87 aa8.12□□□□□ -1.11
PKP4-201ENST00000389757 NPBQ8NG41 125 aa8.12□□□□□ -1.11
PKP4-201ENST00000389757 APOMO95445 188 aa8.12□□□□□ -1.11
PKP4-201ENST00000389757 DEFB136Q30KP8 78 aa8.12□□□□□ -1.11
PKP4-201ENST00000389757 PRR31Q5SQ13 230 aa8.12□□□□□ -1.11
PKP4-201ENST00000389757 MORN3Q6PF18 240 aaPredicted RBP8.12□□□□□ -1.11
PKP4-201ENST00000389757 TRPT1Q86TN4 253 aaKnown RBP8.12□□□□□ -1.11
PKP4-201ENST00000389757 IGFBPL1Q8WX77 278 aa8.12□□□□□ -1.11
PKP4-201ENST00000389757 GFRA4Q9GZZ7 299 aa8.12□□□□□ -1.11
PKP4-201ENST00000389757 AZU1P20160 251 aa8.12□□□□□ -1.11
PKP4-201ENST00000389757 CD300EQ496F6 205 aaPredicted RBP8.12□□□□□ -1.11
PKP4-201ENST00000389757 ZNF492Q9P255 531 aa8.12□□□□□ -1.11
PKP4-201ENST00000389757 MED13Q9UHV7 2174 aa8.12□□□□□ -1.11
PKP4-201ENST00000389757 IGHV7-81A0A0B4J1V7 117 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms