RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 TDRG1Q3Y452 100 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 ZNF876PQ49A33 203 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 C1orf194Q5T5A4 169 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 Q6ZWC4 215 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 TMEM167AQ8TBQ9 72 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 GTSF1LQ9H1H1 148 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 OBSL1O75147 1896 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 USP9XQ93008 2570 aaPredicted RBP4.02□□□□□ -1.77
LTN1-202ENST00000389194 NDUFB8O95169 186 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 CD28P10747 220 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 RNASE13Q5GAN3 156 aaKnown RBP4.02□□□□□ -1.77
LTN1-202ENST00000389194 PVRIGQ6DKI7 326 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 KLK9Q9UKQ9 250 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 FN1P02751 2386 aaKnown RBP4.02□□□□□ -1.77
LTN1-202ENST00000389194 TRBV7-9A0A0J9YWB2 115 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 DNAL4O96015 105 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 TDGF1P13385 188 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 STHQ8IWL8 128 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 RITA1Q96K30 269 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 A0A0G2JLM5 398 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 SYS1-DBNDD2H3BUS1 97 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 PFN1P07737 140 aaKnown RBP4.02□□□□□ -1.77
LTN1-202ENST00000389194 FRMD6-AS1P0C7T7 363 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 SYNJ2BPP57105 145 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 SRSF7Q16629 238 aaKnown RBP eCLIP4.02□□□□□ -1.77
LTN1-202ENST00000389194 ZC2HC1BQ5TFG8 222 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 ORAOV1Q8WV07 137 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 USP9YO00507 2555 aaPredicted RBP4.01□□□□□ -1.77
LTN1-202ENST00000389194 SAMD5Q5TGI4 173 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 OR5A1Q8NGJ0 315 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 ANKRD11Q6UB99 2663 aaPredicted RBP4.01□□□□□ -1.77
LTN1-202ENST00000389194 ATP6V0E1O15342 81 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 VDAC2P45880 294 aaPredicted RBP4.01□□□□□ -1.77
LTN1-202ENST00000389194 SRSF1Q07955 248 aaKnown RBP eCLIP4.01□□□□□ -1.77
LTN1-202ENST00000389194 ZNF415Q09FC8 603 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 NAV2Q8IVL1 2488 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 OR2K2Q8NGT1 345 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 TMEM242Q9NWH2 141 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 NUPR1O60356 82 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 ATP5IP56385 69 aaPredicted RBP4.01□□□□□ -1.77
LTN1-202ENST00000389194 ASCL4Q6XD76 172 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 SLC25A2Q9BXI2 301 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 HIVEP2P31629 2446 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 TRAV21A0A0B4J279 112 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 DLEU1O43261 78 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 RAB9AP51151 201 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 ATP5L2Q7Z4Y8 100 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 SPXQ9BT56 116 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 CSTL1Q9H114 145 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 KLF2Q9Y5W3 355 aaPredicted RBP4.01□□□□□ -1.77
LTN1-202ENST00000389194 IGHV3-38A0A0C4DH36 116 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 F6UB75 175 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 PSG3Q16557 428 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 SPINK13Q1W4C9 94 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 TMEM30BQ3MIR4 351 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 MORN5Q5VZ52 161 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 TEX36Q5VZQ5 186 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 ZNF479Q96JC4 524 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 ABCA12Q86UK0 2595 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 TRAV13-1A0A0B4J241 112 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 A8MWP6 167 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 FAM120AOSQ5T036 256 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 FOXL2NBQ6ZUU3 175 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 C18orf32Q8TCD1 76 aa4.01□□□□□ -1.77
LTN1-202ENST00000389194 IGLV3-9A0A075B6K5 115 aa4□□□□□ -1.77
LTN1-202ENST00000389194 TRGV1A0A0A0MS02 117 aa4□□□□□ -1.77
LTN1-202ENST00000389194 MBD3L4A6NDZ8 208 aaPredicted RBP4□□□□□ -1.77
LTN1-202ENST00000389194 MBD3L3A6NE82 208 aaPredicted RBP4□□□□□ -1.77
LTN1-202ENST00000389194 MBD3L5A6NJ08 208 aaPredicted RBP4□□□□□ -1.77
LTN1-202ENST00000389194 K7EN84 100 aa4□□□□□ -1.77
LTN1-202ENST00000389194 MBD3L2Q8NHZ7 208 aaPredicted RBP4□□□□□ -1.77
LTN1-202ENST00000389194 HOXA3O43365 443 aaPredicted RBP4□□□□□ -1.77
LTN1-202ENST00000389194 DEFB1P60022 68 aa4□□□□□ -1.77
LTN1-202ENST00000389194 NRGNQ92686 78 aa4□□□□□ -1.77
LTN1-202ENST00000389194 C1orf159Q96HA4 380 aa4□□□□□ -1.77
LTN1-202ENST00000389194 RNF223E7ERA6 249 aa4□□□□□ -1.77
LTN1-202ENST00000389194 PAX2Q02962 417 aa4□□□□□ -1.77
LTN1-202ENST00000389194 LAGE3Q14657 143 aa4□□□□□ -1.77
LTN1-202ENST00000389194 KIR3DS1Q14943 382 aa4□□□□□ -1.77
LTN1-202ENST00000389194 C5orf30Q96GV9 206 aa4□□□□□ -1.77
LTN1-202ENST00000389194 CHCHD5Q9BSY4 110 aa4□□□□□ -1.77
LTN1-202ENST00000389194 TMEM14BQ9NUH8 114 aa4□□□□□ -1.77
LTN1-202ENST00000389194 NUP210Q8TEM1 1887 aaPredicted RBP4□□□□□ -1.77
LTN1-202ENST00000389194 TRGV4A0A0C4DH28 118 aa4□□□□□ -1.77
LTN1-202ENST00000389194 Q6ZS92 163 aa4□□□□□ -1.77
LTN1-202ENST00000389194 VGLL1Q99990 258 aa4□□□□□ -1.77
LTN1-202ENST00000389194 C2orf88Q9BSF0 95 aa4□□□□□ -1.77
LTN1-202ENST00000389194 RHPN1-AS1Q9BWJ2 59 aa4□□□□□ -1.77
LTN1-202ENST00000389194 K7ERJ3 54 aa4□□□□□ -1.77
LTN1-202ENST00000389194 SAP30O75446 220 aa4□□□□□ -1.77
LTN1-202ENST00000389194 CSRP1P21291 193 aaKnown RBP4□□□□□ -1.77
LTN1-202ENST00000389194 EFNA4P52798 201 aa4□□□□□ -1.77
LTN1-202ENST00000389194 Q86TA4 180 aa4□□□□□ -1.77
LTN1-202ENST00000389194 PIP4P2Q8N4L2 257 aa4□□□□□ -1.77
LTN1-202ENST00000389194 NUP37Q8NFH4 326 aa4□□□□□ -1.77
LTN1-202ENST00000389194 TRGV9Q99603 122 aa4□□□□□ -1.77
LTN1-202ENST00000389194 GATA1P15976 413 aaPredicted RBP4□□□□□ -1.77
LTN1-202ENST00000389194 TMEM155Q4W5P6 130 aa4□□□□□ -1.77
LTN1-202ENST00000389194 UTF1Q5T230 341 aa4□□□□□ -1.77
LTN1-202ENST00000389194 TMEM101Q96IK0 257 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms