RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 NTF4P34130 210 aa11.97□□□□□ -0.49
LRRK1-201ENST00000388948 AGMATQ9BSE5 352 aa11.97□□□□□ -0.49
LRRK1-201ENST00000388948 PRR31Q5SQ13 230 aa11.96□□□□□ -0.49
LRRK1-201ENST00000388948 PRIMA1Q86XR5 153 aa11.96□□□□□ -0.49
LRRK1-201ENST00000388948 RPP25LQ8N5L8 163 aaKnown RBP11.96□□□□□ -0.49
LRRK1-201ENST00000388948 KLF2Q9Y5W3 355 aaPredicted RBP11.96□□□□□ -0.49
LRRK1-201ENST00000388948 TRAV12-2A0A075B6T6 113 aa11.96□□□□□ -0.49
LRRK1-201ENST00000388948 TRBV6-6A0A0A6YYG2 114 aa11.96□□□□□ -0.49
LRRK1-201ENST00000388948 RHODO00212 210 aa11.96□□□□□ -0.49
LRRK1-201ENST00000388948 ELANEP08246 267 aa11.96□□□□□ -0.49
LRRK1-201ENST00000388948 DDTP30046 118 aa11.96□□□□□ -0.49
LRRK1-201ENST00000388948 PLEKHB2Q96CS7 222 aa11.96□□□□□ -0.5
LRRK1-201ENST00000388948 GFI1Q99684 422 aa11.96□□□□□ -0.5
LRRK1-201ENST00000388948 NOTCH4Q99466 2003 aa11.96□□□□□ -0.5
LRRK1-201ENST00000388948 IGLV3-9A0A075B6K5 115 aa11.95□□□□□ -0.5
LRRK1-201ENST00000388948 K7EM74 188 aa11.95□□□□□ -0.5
LRRK1-201ENST00000388948 ARMS2P0C7Q2 107 aa11.95□□□□□ -0.5
LRRK1-201ENST00000388948 C9orf66Q5T8R8 295 aa11.95□□□□□ -0.5
LRRK1-201ENST00000388948 DUX4L9Q6RFH8 374 aaPredicted RBP11.95□□□□□ -0.5
LRRK1-201ENST00000388948 NRGNQ92686 78 aa11.95□□□□□ -0.5
LRRK1-201ENST00000388948 WFDC1Q9HC57 220 aa11.95□□□□□ -0.5
LRRK1-201ENST00000388948 ZNF581Q9P0T4 197 aa11.95□□□□□ -0.5
LRRK1-201ENST00000388948 A0A087WWC5 75 aa11.95□□□□□ -0.5
LRRK1-201ENST00000388948 TRAV8-2A0A0B4J237 113 aa11.95□□□□□ -0.5
LRRK1-201ENST00000388948 TMEM126AQ9H061 195 aa11.95□□□□□ -0.5
LRRK1-201ENST00000388948 LOXP28300 417 aaPredicted RBP11.95□□□□□ -0.5
LRRK1-201ENST00000388948 THAP8Q8NA92 274 aa11.95□□□□□ -0.5
LRRK1-201ENST00000388948 SHANK2-AS3Q9BTD1 123 aa11.95□□□□□ -0.5
LRRK1-201ENST00000388948 GNB1LQ9BYB4 327 aa11.95□□□□□ -0.5
LRRK1-201ENST00000388948 LEPROTO15243 131 aa11.94□□□□□ -0.5
LRRK1-201ENST00000388948 NMSQ5H8A3 153 aa11.94□□□□□ -0.5
LRRK1-201ENST00000388948 NLRC5Q86WI3 1866 aa11.94□□□□□ -0.5
LRRK1-201ENST00000388948 NDUFA4O00483 81 aa11.94□□□□□ -0.5
LRRK1-201ENST00000388948 TRPT1Q86TN4 253 aaKnown RBP11.94□□□□□ -0.5
LRRK1-201ENST00000388948 IGHV2-5P01817 119 aa11.94□□□□□ -0.5
LRRK1-201ENST00000388948 SLX1AQ9BQ83 275 aa11.94□□□□□ -0.5
LRRK1-201ENST00000388948 SPXQ9BT56 116 aa11.94□□□□□ -0.5
LRRK1-201ENST00000388948 CHCHD1Q96BP2 118 aaKnown RBP11.94□□□□□ -0.5
LRRK1-201ENST00000388948 MRPL27Q9P0M9 148 aaKnown RBP11.94□□□□□ -0.5
LRRK1-201ENST00000388948 FAM120AOSQ5T036 256 aa11.94□□□□□ -0.5
LRRK1-201ENST00000388948 TMEM158Q8WZ71 300 aa11.94□□□□□ -0.5
LRRK1-201ENST00000388948 Q6ZR03 302 aa11.93□□□□□ -0.5
LRRK1-201ENST00000388948 RNF144BQ7Z419 303 aa11.93□□□□□ -0.5
LRRK1-201ENST00000388948 H0YIZ8 118 aa11.93□□□□□ -0.5
LRRK1-201ENST00000388948 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.93□□□□□ -0.5
LRRK1-201ENST00000388948 CDKN1BP46527 198 aa11.93□□□□□ -0.5
LRRK1-201ENST00000388948 ERG28Q9UKR5 140 aa11.93□□□□□ -0.5
LRRK1-201ENST00000388948 SPCS1Q9Y6A9 102 aa11.93□□□□□ -0.5
LRRK1-201ENST00000388948 SPOCK3Q9BQ16 436 aa11.93□□□□□ -0.5
LRRK1-201ENST00000388948 IGHV4-30-2A0A087WSY4 118 aa11.93□□□□□ -0.5
LRRK1-201ENST00000388948 ANAPC1Q9H1A4 1944 aa11.93□□□□□ -0.5
LRRK1-201ENST00000388948 A8MXK9 166 aa11.93□□□□□ -0.5
LRRK1-201ENST00000388948 GAGE6Q13070 117 aa11.93□□□□□ -0.5
LRRK1-201ENST00000388948 PDE6HQ13956 83 aa11.93□□□□□ -0.5
LRRK1-201ENST00000388948 DEFB136Q30KP8 78 aa11.92□□□□□ -0.5
LRRK1-201ENST00000388948 TANC1Q9C0D5 1861 aa11.92□□□□□ -0.5
LRRK1-201ENST00000388948 CHD3Q12873 2000 aaKnown RBP11.92□□□□□ -0.5
LRRK1-201ENST00000388948 C22orf46C9J442 243 aa11.92□□□□□ -0.5
LRRK1-201ENST00000388948 FOXL2NBQ6ZUU3 175 aa11.92□□□□□ -0.5
LRRK1-201ENST00000388948 ANGP03950 147 aaKnown RBP11.92□□□□□ -0.5
LRRK1-201ENST00000388948 ATXN8Q156A1 80 aa11.92□□□□□ -0.5
LRRK1-201ENST00000388948 WT1P19544 449 aaPredicted RBP11.92□□□□□ -0.5
LRRK1-201ENST00000388948 PLA2G5P39877 138 aa11.92□□□□□ -0.5
LRRK1-201ENST00000388948 PROK2Q9HC23 129 aa11.92□□□□□ -0.5
LRRK1-201ENST00000388948 IGHV1OR15-1A0A075B7D0 117 aa11.92□□□□□ -0.5
LRRK1-201ENST00000388948 IGLV2-23P01705 113 aa11.92□□□□□ -0.5
LRRK1-201ENST00000388948 TMEM14EPQ6UXP3 125 aa11.92□□□□□ -0.5
LRRK1-201ENST00000388948 C8orf86Q6ZUL3 223 aa11.92□□□□□ -0.5
LRRK1-201ENST00000388948 LY6G5BQ8NDX9 201 aa11.92□□□□□ -0.5
LRRK1-201ENST00000388948 ZNRF2Q8NHG8 242 aa11.92□□□□□ -0.5
LRRK1-201ENST00000388948 Q9HAA7 133 aa11.92□□□□□ -0.5
LRRK1-201ENST00000388948 MYMXA0A1B0GTQ4 84 aa11.91□□□□□ -0.5
LRRK1-201ENST00000388948 FGF16O43320 207 aa11.91□□□□□ -0.5
LRRK1-201ENST00000388948 LHFPL1Q86WI0 220 aa11.91□□□□□ -0.5
LRRK1-201ENST00000388948 IGKV2D-24A0A075B6R9 120 aa11.91□□□□□ -0.5
LRRK1-201ENST00000388948 A0A1B0GUS0 222 aa11.91□□□□□ -0.5
LRRK1-201ENST00000388948 A8MWV9 139 aa11.91□□□□□ -0.5
LRRK1-201ENST00000388948 MBD3L1Q8WWY6 194 aa11.91□□□□□ -0.5
LRRK1-201ENST00000388948 ADAMTS9Q9P2N4 1935 aa11.91□□□□□ -0.5
LRRK1-201ENST00000388948 LY6G6FQ5SQ64 297 aa11.91□□□□□ -0.5
LRRK1-201ENST00000388948 A0A0J9YY99 117 aa11.91□□□□□ -0.5
LRRK1-201ENST00000388948 C15orf62A8K5M9 175 aa11.91□□□□□ -0.5
LRRK1-201ENST00000388948 TIMM21Q9BVV7 248 aa11.91□□□□□ -0.5
LRRK1-201ENST00000388948 RLFQ13129 1914 aa11.91□□□□□ -0.5
LRRK1-201ENST00000388948 ITGB1BP1O14713 200 aa11.91□□□□□ -0.5
LRRK1-201ENST00000388948 SMKR1H3BMG3 65 aa11.91□□□□□ -0.5
LRRK1-201ENST00000388948 IGHV4-61A0A0C4DH41 118 aa11.9□□□□□ -0.5
LRRK1-201ENST00000388948 ZNF833PQ6ZTB9 187 aa11.9□□□□□ -0.5
LRRK1-201ENST00000388948 TMEM243Q9BU79 118 aa11.9□□□□□ -0.5
LRRK1-201ENST00000388948 IGKV1OR2-108A0A075B7D4 117 aa11.9□□□□□ -0.5
LRRK1-201ENST00000388948 ANXA2RQ3ZCQ2 193 aa11.9□□□□□ -0.5
LRRK1-201ENST00000388948 SMPXQ9UHP9 88 aa11.9□□□□□ -0.5
LRRK1-201ENST00000388948 SIP14410 1827 aa11.9□□□□□ -0.5
LRRK1-201ENST00000388948 VWC2LB2RUY7 222 aa11.9□□□□□ -0.5
LRRK1-201ENST00000388948 YPEL3P61236 119 aaPredicted RBP11.9□□□□□ -0.5
LRRK1-201ENST00000388948 NCKAP5O14513 1909 aa11.9□□□□□ -0.5
LRRK1-201ENST00000388948 KMT2EQ8IZD2 1858 aa11.9□□□□□ -0.5
LRRK1-201ENST00000388948 TEX36Q5VZQ5 186 aa11.9□□□□□ -0.51
LRRK1-201ENST00000388948 HS3ST6Q96QI5 342 aa11.9□□□□□ -0.51
LRRK1-201ENST00000388948 SPAG8Q99932 426 aaPredicted RBP11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms