RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 CENPEQ02224 2701 aa10.41□□□□□ -0.74
SEC13-203ENST00000383801 ABCA12Q86UK0 2595 aa10.4□□□□□ -0.74
SEC13-203ENST00000383801 M0R3E3 92 aa10.4□□□□□ -0.74
SEC13-203ENST00000383801 CHEK1O14757 476 aa10.4□□□□□ -0.74
SEC13-203ENST00000383801 SMAD7O15105 426 aaKnown RBP10.4□□□□□ -0.74
SEC13-203ENST00000383801 CT45A10P0DMU9 189 aa10.4□□□□□ -0.74
SEC13-203ENST00000383801 NHLRC2Q8NBF2 726 aa10.4□□□□□ -0.74
SEC13-203ENST00000383801 RPP21Q9H633 154 aaKnown RBP10.4□□□□□ -0.74
SEC13-203ENST00000383801 CREBBPQ92793 2442 aa10.4□□□□□ -0.74
SEC13-203ENST00000383801 TENM4Q6N022 2769 aa10.4□□□□□ -0.74
SEC13-203ENST00000383801 IGHV7-4-1A0A0J9YVY3 117 aa10.39□□□□□ -0.75
SEC13-203ENST00000383801 LGALS9O00182 355 aa10.39□□□□□ -0.75
SEC13-203ENST00000383801 IGHV3-11P01762 117 aa10.39□□□□□ -0.75
SEC13-203ENST00000383801 S100A8P05109 93 aa10.39□□□□□ -0.75
SEC13-203ENST00000383801 LGALS1P09382 135 aaKnown RBP10.39□□□□□ -0.75
SEC13-203ENST00000383801 COA6Q5JTJ3 125 aaKnown RBP10.39□□□□□ -0.75
SEC13-203ENST00000383801 GBGT1Q8N5D6 347 aa10.39□□□□□ -0.75
SEC13-203ENST00000383801 NDFIP1Q9BT67 221 aa10.39□□□□□ -0.75
SEC13-203ENST00000383801 TRAV8-1A0A0A6YYK1 113 aa10.38□□□□□ -0.75
SEC13-203ENST00000383801 TRBV12-3P01733 135 aa10.38□□□□□ -0.75
SEC13-203ENST00000383801 APOHP02749 345 aaPredicted RBP10.38□□□□□ -0.75
SEC13-203ENST00000383801 CDX1P47902 265 aaPredicted RBP10.38□□□□□ -0.75
SEC13-203ENST00000383801 SRSF2Q01130 221 aaKnown RBP10.38□□□□□ -0.75
SEC13-203ENST00000383801 KRTAP1-1Q07627 177 aa10.38□□□□□ -0.75
SEC13-203ENST00000383801 FABP9Q0Z7S8 132 aa10.38□□□□□ -0.75
SEC13-203ENST00000383801 PRR27Q6MZM9 219 aa10.38□□□□□ -0.75
SEC13-203ENST00000383801 REC114Q7Z4M0 266 aa10.38□□□□□ -0.75
SEC13-203ENST00000383801 PRR25Q96S07 402 aa10.38□□□□□ -0.75
SEC13-203ENST00000383801 SMPXQ9UHP9 88 aa10.38□□□□□ -0.75
SEC13-203ENST00000383801 LENEPQ9Y5L5 61 aa10.38□□□□□ -0.75
SEC13-203ENST00000383801 IGHV3OR16-8A0A075B7F1 116 aa10.37□□□□□ -0.75
SEC13-203ENST00000383801 XKRY2A2RUG3 117 aa10.37□□□□□ -0.75
SEC13-203ENST00000383801 HLA-DQA1P01909 254 aa10.37□□□□□ -0.75
SEC13-203ENST00000383801 Q6AWC8 147 aa10.37□□□□□ -0.75
SEC13-203ENST00000383801 UNQ9165/PRO28630Q6UXU0 137 aa10.37□□□□□ -0.75
SEC13-203ENST00000383801 C8orf86Q6ZUL3 223 aa10.37□□□□□ -0.75
SEC13-203ENST00000383801 SGK494Q96LW2 274 aa10.37□□□□□ -0.75
SEC13-203ENST00000383801 SVEP1Q4LDE5 3571 aa10.37□□□□□ -0.75
SEC13-203ENST00000383801 A8MWP6 167 aa10.36□□□□□ -0.75
SEC13-203ENST00000383801 NDUFA6P56556 154 aa10.36□□□□□ -0.75
SEC13-203ENST00000383801 TMEM95Q3KNT9 176 aa10.36□□□□□ -0.75
SEC13-203ENST00000383801 CSMD2Q7Z408 3487 aa10.36□□□□□ -0.75
SEC13-203ENST00000383801 RPLP1P05386 114 aaKnown RBP10.36□□□□□ -0.75
SEC13-203ENST00000383801 RPS20P60866 119 aaKnown RBP10.36□□□□□ -0.75
SEC13-203ENST00000383801 LINC00322Q6ZN03 302 aaPredicted RBP10.36□□□□□ -0.75
SEC13-203ENST00000383801 RBPMS2Q6ZRY4 209 aaKnown RBP10.36□□□□□ -0.75
SEC13-203ENST00000383801 C9orf47Q6ZRZ4 202 aa10.36□□□□□ -0.75
SEC13-203ENST00000383801 NUP35Q8NFH5 326 aa10.36□□□□□ -0.75
SEC13-203ENST00000383801 ZC2HC1AQ96GY0 325 aa10.36□□□□□ -0.75
SEC13-203ENST00000383801 C16orf92Q96LL3 132 aa10.36□□□□□ -0.75
SEC13-203ENST00000383801 NEU1Q99519 415 aa10.36□□□□□ -0.75
SEC13-203ENST00000383801 RHPN1-AS1Q9BWJ2 59 aa10.36□□□□□ -0.75
SEC13-203ENST00000383801 NRN1Q9NPD7 142 aa10.36□□□□□ -0.75
SEC13-203ENST00000383801 YAE1D1Q9NRH1 226 aa10.36□□□□□ -0.75
SEC13-203ENST00000383801 HELZ2Q9BYK8 2649 aaKnown RBP10.35□□□□□ -0.75
SEC13-203ENST00000383801 TRAV8-2A0A0B4J237 113 aa10.35□□□□□ -0.75
SEC13-203ENST00000383801 TRBV7-9A0A0J9YWB2 115 aa10.35□□□□□ -0.75
SEC13-203ENST00000383801 A0A1B0GW15 77 aa10.35□□□□□ -0.75
SEC13-203ENST00000383801 HIGD1CA8MV81 97 aa10.35□□□□□ -0.75
SEC13-203ENST00000383801 OVOL1O14753 267 aa10.35□□□□□ -0.75
SEC13-203ENST00000383801 ZNF207O43670 478 aaKnown RBP10.35□□□□□ -0.75
SEC13-203ENST00000383801 SMUG1Q53HV7 270 aa10.35□□□□□ -0.75
SEC13-203ENST00000383801 FAM162BQ5T6X4 162 aa10.35□□□□□ -0.75
SEC13-203ENST00000383801 KLHDC1Q8N7A1 406 aa10.35□□□□□ -0.75
SEC13-203ENST00000383801 LINC00477Q96M19 166 aa10.35□□□□□ -0.75
SEC13-203ENST00000383801 SNURFLB1AK76 121 aa10.34□□□□□ -0.75
SEC13-203ENST00000383801 TMEM78Q5T7P6 136 aa10.34□□□□□ -0.75
SEC13-203ENST00000383801 ASCL2Q99929 193 aa10.34□□□□□ -0.75
SEC13-203ENST00000383801 MRPL18Q9H0U6 180 aaKnown RBP10.34□□□□□ -0.75
SEC13-203ENST00000383801 NBPF19A0A087WUL8 3843 aa10.33□□□□□ -0.76
SEC13-203ENST00000383801 PDZD2O15018 2839 aa10.33□□□□□ -0.76
SEC13-203ENST00000383801 IGKV2-40A0A087WW87 121 aaPredicted RBP10.33□□□□□ -0.76
SEC13-203ENST00000383801 IGHV3-66A0A0C4DH42 116 aa10.33□□□□□ -0.76
SEC13-203ENST00000383801 DNAJC9-AS1A6NH13 148 aa10.33□□□□□ -0.76
SEC13-203ENST00000383801 FABP5P3A8MUU1 101 aa10.33□□□□□ -0.76
SEC13-203ENST00000383801 SOCS3O14543 225 aa10.33□□□□□ -0.76
SEC13-203ENST00000383801 IGKV2D-40P01614 121 aaPredicted RBP10.33□□□□□ -0.76
SEC13-203ENST00000383801 RNASE1P07998 156 aaKnown RBP10.33□□□□□ -0.76
SEC13-203ENST00000383801 ID1P41134 155 aa10.33□□□□□ -0.76
SEC13-203ENST00000383801 ZNF138P52744 262 aa10.33□□□□□ -0.76
SEC13-203ENST00000383801 TMEM136Q6ZRR5 245 aa10.33□□□□□ -0.76
SEC13-203ENST00000383801 LCNL1Q6ZST4 164 aa10.33□□□□□ -0.76
SEC13-203ENST00000383801 OR2D3Q8NGH3 330 aa10.33□□□□□ -0.76
SEC13-203ENST00000383801 MAP1AP78559 2803 aaPredicted RBP10.33□□□□□ -0.76
SEC13-203ENST00000383801 A0A1B0GXF2 115 aa10.32□□□□□ -0.76
SEC13-203ENST00000383801 CA1P00915 261 aaPredicted RBP10.32□□□□□ -0.76
SEC13-203ENST00000383801 CRIP1P50238 77 aa10.32□□□□□ -0.76
SEC13-203ENST00000383801 TM4SF20Q53R12 229 aa10.32□□□□□ -0.76
SEC13-203ENST00000383801 ZNF418Q8TF45 676 aaPredicted RBP10.32□□□□□ -0.76
SEC13-203ENST00000383801 C4orf3Q8WVX3 66 aa10.32□□□□□ -0.76
SEC13-203ENST00000383801 JMJD8Q96S16 334 aa10.32□□□□□ -0.76
SEC13-203ENST00000383801 VGLL1Q99990 258 aa10.32□□□□□ -0.76
SEC13-203ENST00000383801 C16orf95Q9H693 158 aa10.32□□□□□ -0.76
SEC13-203ENST00000383801 TEX15Q9BXT5 2789 aa10.32□□□□□ -0.76
SEC13-203ENST00000383801 IGHV3OR16-13A0A075B7E8 117 aa10.31□□□□□ -0.76
SEC13-203ENST00000383801 IGHV3-49A0A0A0MS15 119 aa10.31□□□□□ -0.76
SEC13-203ENST00000383801 IGHV3-74A0A0B4J1X5 117 aa10.31□□□□□ -0.76
SEC13-203ENST00000383801 FAM181BA6NEQ2 426 aa10.31□□□□□ -0.76
SEC13-203ENST00000383801 ZNF705FA8MVS1 300 aaPredicted RBP10.31□□□□□ -0.76
SEC13-203ENST00000383801 HAX1O00165 279 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms