RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 HECTD1Q9ULT8 2610 aa4.02□□□□□ -1.77
PTPRD-203ENST00000381196 TRAV26-1A0A087WT03 109 aa4.02□□□□□ -1.77
PTPRD-203ENST00000381196 AZU1P20160 251 aa4.02□□□□□ -1.77
PTPRD-203ENST00000381196 IFI27P40305 119 aaPredicted RBP4.02□□□□□ -1.77
PTPRD-203ENST00000381196 CD69Q07108 199 aa4.02□□□□□ -1.77
PTPRD-203ENST00000381196 ANXA2RQ3ZCQ2 193 aa4.02□□□□□ -1.77
PTPRD-203ENST00000381196 FOXI2Q6ZQN5 318 aa4.02□□□□□ -1.77
PTPRD-203ENST00000381196 SCRT2Q9NQ03 307 aa4.02□□□□□ -1.77
PTPRD-203ENST00000381196 DLL3Q9NYJ7 618 aa4.02□□□□□ -1.77
PTPRD-203ENST00000381196 GRIFINA4D1Z8 144 aa4.02□□□□□ -1.77
PTPRD-203ENST00000381196 ZNF493Q6ZR52 646 aa4.02□□□□□ -1.77
PTPRD-203ENST00000381196 EEF1AKMT3Q96AZ1 226 aa4.02□□□□□ -1.77
PTPRD-203ENST00000381196 IDI2-AS1Q9NZ38 188 aa4.02□□□□□ -1.77
PTPRD-203ENST00000381196 RNF114Q9Y508 228 aa4.02□□□□□ -1.77
PTPRD-203ENST00000381196 GUSBP1Q15486 140 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 C9orf153Q5TBE3 101 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 TREML4Q6UXN2 200 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 NPYP01303 97 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 LMO1P25800 156 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 GATA4P43694 442 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 MPV17L2Q567V2 206 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 NHP2Q9NX24 153 aaKnown RBP4.01□□□□□ -1.77
PTPRD-203ENST00000381196 CALYQ9NYX4 217 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 TRBV20OR9-2A0A075B6H5 130 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 TRAV8-6A0A0B4J262 113 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 SPINK9Q5DT21 86 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 ZNF488Q96MN9 340 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 FABP5P3A8MUU1 101 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 FAM110AQ9BQ89 295 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 V9GYV3 84 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 NOTCH4Q99466 2003 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 MUC21A0A0G2JKD1 596 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 MUC21A0A140T8X8 626 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 MUC21Q5SSG8 566 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 MBNL2Q5VZF2 373 aaKnown RBP4.01□□□□□ -1.77
PTPRD-203ENST00000381196 Q6ZT83 130 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 MYMXA0A1B0GTQ4 84 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 IGLV3-1P01715 115 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 RBX1P62877 108 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 Q86TA4 180 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 TP73-AS1Q9UF72 201 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 F11RQ9Y624 299 aaKnown RBP4.01□□□□□ -1.77
PTPRD-203ENST00000381196 IGHV3-72A0A0B4J1Y9 119 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 TRGV3P03979 118 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 PAQR4Q8N4S7 273 aaPredicted RBP4.01□□□□□ -1.77
PTPRD-203ENST00000381196 RPP25LQ8N5L8 163 aaKnown RBP4.01□□□□□ -1.77
PTPRD-203ENST00000381196 TMEM14BQ9NUH8 114 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 PIGYQ3MUY2 71 aa4.01□□□□□ -1.77
PTPRD-203ENST00000381196 HRKO00198 91 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 SRSF3P84103 164 aaKnown RBP4□□□□□ -1.77
PTPRD-203ENST00000381196 ZNF474Q6S9Z5 364 aaPredicted RBP4□□□□□ -1.77
PTPRD-203ENST00000381196 HS3ST6Q96QI5 342 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 SMIM2Q9BVW6 85 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 IGKV3OR2-268A0A0C4DH90 116 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 LTAP01374 205 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 CD59P13987 128 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 NPPCP23582 126 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 ZCCHC24Q8N2G6 241 aaKnown RBP4□□□□□ -1.77
PTPRD-203ENST00000381196 TM2D2Q9BX73 214 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 JPT2Q9H910 190 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 RHODO00212 210 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 IGLC1P0CG04 106 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 CD33P20138 364 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 FAM74A4Q5TZK3 123 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 GAGE2AQ6NT46 116 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 THAP8Q8NA92 274 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 PTH2Q96A98 100 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 TRAV13-2A0A0B4J235 113 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 SCTP09683 121 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 NPC2P61916 151 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 FAM27E3Q08E93 113 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 ITLN2Q8WWU7 325 aaPredicted RBP4□□□□□ -1.77
PTPRD-203ENST00000381196 DUX3Q96PT4 197 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 Q9H3A6 140 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 FBXL15Q9H469 300 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 MBNL3Q9NUK0 354 aaKnown RBP4□□□□□ -1.77
PTPRD-203ENST00000381196 SCO2A0A1W2PP80 73 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 TCRAP04437 139 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 P0DMU3 169 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 FAM231AP0DMU4 169 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 FAM231CP0DMU5 169 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 MYOD1P15172 320 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 IGHV3-21A0A0B4J1V1 117 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 hADV29S1A0JD25 119 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 F8VRH5 84 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 AMTNQ6UX39 209 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 ZNRF1Q8ND25 227 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 C1QCP02747 245 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 C9orf139Q6ZV77 190 aa4□□□□□ -1.77
PTPRD-203ENST00000381196 CENPVL3A0A0U1RRI6 287 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 H0YGX0 51 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 VCYO14598 125 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 LEPROTO15243 131 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 CCL25O15444 150 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 CFHR2P36980 270 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 BCE1O60756 84 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 MOSP00540 346 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 ABHD12Q8N2K0 398 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 LINC00311Q8N616 119 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 OCC1Q8TAD7 63 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms