RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 FBXL19-AS1Q494R0 122 aa12.75□□□□□ -0.37
NKX3-1-201ENST00000380871 PET117Q6UWS5 81 aa12.75□□□□□ -0.37
NKX3-1-201ENST00000380871 RNF125Q96EQ8 232 aa12.75□□□□□ -0.37
NKX3-1-201ENST00000380871 IGHV3OR16-10A0A075B7F0 116 aa12.75□□□□□ -0.37
NKX3-1-201ENST00000380871 PRSS3P2Q8NHM4 247 aa12.75□□□□□ -0.37
NKX3-1-201ENST00000380871 ZNF747Q9BV97 191 aa12.75□□□□□ -0.37
NKX3-1-201ENST00000380871 HSPB8Q9UJY1 196 aa12.75□□□□□ -0.37
NKX3-1-201ENST00000380871 PKD1L2Q7Z442 2459 aa12.75□□□□□ -0.37
NKX3-1-201ENST00000380871 A0A096LNJ9 63 aa12.75□□□□□ -0.37
NKX3-1-201ENST00000380871 LINC01545Q5VT33 79 aa12.75□□□□□ -0.37
NKX3-1-201ENST00000380871 DYNAPQ8N1N2 210 aa12.75□□□□□ -0.37
NKX3-1-201ENST00000380871 TMEM75Q8N9X5 138 aa12.75□□□□□ -0.37
NKX3-1-201ENST00000380871 OR8A1Q8NGG7 326 aa12.75□□□□□ -0.37
NKX3-1-201ENST00000380871 D6R8Y8 96 aa12.74□□□□□ -0.37
NKX3-1-201ENST00000380871 GNLYP22749 145 aa12.74□□□□□ -0.37
NKX3-1-201ENST00000380871 RNF151Q2KHN1 245 aa12.74□□□□□ -0.37
NKX3-1-201ENST00000380871 IGFL4Q6B9Z1 124 aa12.74□□□□□ -0.37
NKX3-1-201ENST00000380871 AMN1Q8IY45 258 aa12.74□□□□□ -0.37
NKX3-1-201ENST00000380871 TNFRSF14Q92956 283 aa12.74□□□□□ -0.37
NKX3-1-201ENST00000380871 ZNF414Q96IQ9 312 aa12.74□□□□□ -0.37
NKX3-1-201ENST00000380871 CACNA1AO00555 2505 aa12.74□□□□□ -0.37
NKX3-1-201ENST00000380871 ZFP36P26651 326 aaKnown RBP12.74□□□□□ -0.37
NKX3-1-201ENST00000380871 PIP4P2Q8N4L2 257 aa12.74□□□□□ -0.37
NKX3-1-201ENST00000380871 MRPS12O15235 138 aaKnown RBP12.73□□□□□ -0.37
NKX3-1-201ENST00000380871 RIGQ13278 110 aa12.73□□□□□ -0.37
NKX3-1-201ENST00000380871 AMMECR1LQ6DCA0 310 aa12.73□□□□□ -0.37
NKX3-1-201ENST00000380871 FA2HQ7L5A8 372 aa12.73□□□□□ -0.37
NKX3-1-201ENST00000380871 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.73□□□□□ -0.37
NKX3-1-201ENST00000380871 IGKV2-40A0A087WW87 121 aaPredicted RBP12.73□□□□□ -0.37
NKX3-1-201ENST00000380871 IGKV2D-40P01614 121 aaPredicted RBP12.73□□□□□ -0.37
NKX3-1-201ENST00000380871 PAX2Q02962 417 aa12.73□□□□□ -0.37
NKX3-1-201ENST00000380871 LYZL1Q6UWQ5 148 aa12.73□□□□□ -0.37
NKX3-1-201ENST00000380871 C2orf91Q6ZV80 131 aa12.73□□□□□ -0.37
NKX3-1-201ENST00000380871 VMO1Q7Z5L0 202 aa12.73□□□□□ -0.37
NKX3-1-201ENST00000380871 DEFB125Q8N687 156 aa12.73□□□□□ -0.37
NKX3-1-201ENST00000380871 SMKR1H3BMG3 65 aa12.73□□□□□ -0.37
NKX3-1-201ENST00000380871 NBR2O15453 112 aa12.72□□□□□ -0.37
NKX3-1-201ENST00000380871 Q8TAT8 98 aa12.72□□□□□ -0.37
NKX3-1-201ENST00000380871 C19orf84I3L1E1 186 aa12.72□□□□□ -0.37
NKX3-1-201ENST00000380871 K7EP13 123 aa12.72□□□□□ -0.37
NKX3-1-201ENST00000380871 LY6LH3BQJ8 138 aa12.72□□□□□ -0.37
NKX3-1-201ENST00000380871 ANKRD39Q53RE8 183 aa12.72□□□□□ -0.37
NKX3-1-201ENST00000380871 SIGLEC8Q9NYZ4 499 aa12.72□□□□□ -0.37
NKX3-1-201ENST00000380871 ACACBO00763 2458 aa12.71□□□□□ -0.37
NKX3-1-201ENST00000380871 WFDC3Q8IUB2 231 aa12.71□□□□□ -0.37
NKX3-1-201ENST00000380871 CEACAM3P40198 252 aa12.71□□□□□ -0.38
NKX3-1-201ENST00000380871 ZFYVE26Q68DK2 2539 aa12.71□□□□□ -0.38
NKX3-1-201ENST00000380871 TRAV8-6A0A0B4J262 113 aa12.7□□□□□ -0.38
NKX3-1-201ENST00000380871 OR10AG1Q8NH19 301 aa12.7□□□□□ -0.38
NKX3-1-201ENST00000380871 TRAV30A0A087WSZ9 112 aa12.7□□□□□ -0.38
NKX3-1-201ENST00000380871 K7EQM0 130 aa12.7□□□□□ -0.38
NKX3-1-201ENST00000380871 GNG7O60262 68 aa12.7□□□□□ -0.38
NKX3-1-201ENST00000380871 SH2D1AO60880 128 aa12.7□□□□□ -0.38
NKX3-1-201ENST00000380871 HLA-DMBP28068 263 aa12.7□□□□□ -0.38
NKX3-1-201ENST00000380871 GPR183P32249 361 aa12.7□□□□□ -0.38
NKX3-1-201ENST00000380871 PSG9Q00887 426 aa12.7□□□□□ -0.38
NKX3-1-201ENST00000380871 RHOGP84095 191 aa12.7□□□□□ -0.38
NKX3-1-201ENST00000380871 C12orf54Q6X4T0 127 aa12.7□□□□□ -0.38
NKX3-1-201ENST00000380871 CT45A10P0DMU9 189 aa12.69□□□□□ -0.38
NKX3-1-201ENST00000380871 COX8AP10176 69 aa12.69□□□□□ -0.38
NKX3-1-201ENST00000380871 NDPQ00604 133 aa12.69□□□□□ -0.38
NKX3-1-201ENST00000380871 LY6G5BQ8NDX9 201 aa12.69□□□□□ -0.38
NKX3-1-201ENST00000380871 TRBV6-1A0A0K0K1D8 114 aa12.69□□□□□ -0.38
NKX3-1-201ENST00000380871 PRTN3P24158 256 aa12.69□□□□□ -0.38
NKX3-1-201ENST00000380871 HIST1H1AQ02539 215 aaPredicted RBP12.69□□□□□ -0.38
NKX3-1-201ENST00000380871 C11orf71Q6IPW1 123 aa12.69□□□□□ -0.38
NKX3-1-201ENST00000380871 F8W735 103 aaPredicted RBP12.68□□□□□ -0.38
NKX3-1-201ENST00000380871 CSN1S1P47710 185 aa12.68□□□□□ -0.38
NKX3-1-201ENST00000380871 FANCD2OSQ96PS1 177 aa12.68□□□□□ -0.38
NKX3-1-201ENST00000380871 NAA38Q9BRA0 125 aaKnown RBP12.68□□□□□ -0.38
NKX3-1-201ENST00000380871 BPESC1Q9GZL8 116 aa12.68□□□□□ -0.38
NKX3-1-201ENST00000380871 MS4A6AQ9H2W1 248 aa12.68□□□□□ -0.38
NKX3-1-201ENST00000380871 ZNF80P51504 273 aaPredicted RBP12.68□□□□□ -0.38
NKX3-1-201ENST00000380871 PRELID3AQ96N28 172 aa12.68□□□□□ -0.38
NKX3-1-201ENST00000380871 CELSR1Q9NYQ6 3014 aa12.68□□□□□ -0.38
NKX3-1-201ENST00000380871 WI2-2373I1.2A0A1W2PRP0 233 aa12.68□□□□□ -0.38
NKX3-1-201ENST00000380871 TMEM189A5PLL7 270 aa12.68□□□□□ -0.38
NKX3-1-201ENST00000380871 GAS8-AS1O95177 125 aa12.68□□□□□ -0.38
NKX3-1-201ENST00000380871 CACNG7P62955 275 aa12.68□□□□□ -0.38
NKX3-1-201ENST00000380871 ITPR1Q14643 2758 aa12.67□□□□□ -0.38
NKX3-1-201ENST00000380871 ECSCRQ19T08 205 aa12.67□□□□□ -0.38
NKX3-1-201ENST00000380871 C5orf64Q2M2E5 130 aa12.67□□□□□ -0.38
NKX3-1-201ENST00000380871 FAM208BQ5VWN6 2430 aa12.67□□□□□ -0.38
NKX3-1-201ENST00000380871 NPIPB5A8MRT5 1133 aa12.67□□□□□ -0.38
NKX3-1-201ENST00000380871 FGF6P10767 208 aa12.67□□□□□ -0.38
NKX3-1-201ENST00000380871 EGR2P11161 476 aaPredicted RBP12.67□□□□□ -0.38
NKX3-1-201ENST00000380871 TMEM11P17152 192 aa12.67□□□□□ -0.38
NKX3-1-201ENST00000380871 MRPL51Q4U2R6 128 aaKnown RBP12.67□□□□□ -0.38
NKX3-1-201ENST00000380871 GATD1Q8NB37 220 aa12.67□□□□□ -0.38
NKX3-1-201ENST00000380871 CFHR4Q92496 578 aa12.67□□□□□ -0.38
NKX3-1-201ENST00000380871 FAM104BQ5XKR9 115 aa12.66□□□□□ -0.38
NKX3-1-201ENST00000380871 VGLL1Q99990 258 aa12.66□□□□□ -0.38
NKX3-1-201ENST00000380871 AAMDCQ9H7C9 122 aa12.66□□□□□ -0.38
NKX3-1-201ENST00000380871 MSRB1Q9NZV6 116 aa12.66□□□□□ -0.38
NKX3-1-201ENST00000380871 OR11H6Q8NGC7 330 aa12.66□□□□□ -0.38
NKX3-1-201ENST00000380871 IGHV3OR16-13A0A075B7E8 117 aa12.66□□□□□ -0.38
NKX3-1-201ENST00000380871 IGHV3-74A0A0B4J1X5 117 aa12.66□□□□□ -0.38
NKX3-1-201ENST00000380871 NPYP01303 97 aa12.66□□□□□ -0.38
NKX3-1-201ENST00000380871 PRSS57Q6UWY2 283 aa12.66□□□□□ -0.38
NKX3-1-201ENST00000380871 ZNF493Q6ZR52 646 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms