RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 IQCF2Q8IXL9 164 aa9.35□□□□□ -0.91
SMN2-203ENST00000380743 ZNF738Q8NE65 137 aa9.35□□□□□ -0.91
SMN2-203ENST00000380743 SAV1Q9H4B6 383 aaPredicted RBP9.35□□□□□ -0.91
SMN2-203ENST00000380743 AGRNO00468 2067 aa9.34□□□□□ -0.91
SMN2-203ENST00000380743 TGP01266 2768 aa9.34□□□□□ -0.91
SMN2-203ENST00000380743 HUWE1Q7Z6Z7 4374 aaKnown RBP9.34□□□□□ -0.91
SMN2-203ENST00000380743 A0A1B0GV50 99 aa9.34□□□□□ -0.91
SMN2-203ENST00000380743 PRAC2D3DTV9 90 aa9.34□□□□□ -0.91
SMN2-203ENST00000380743 M0R3E3 92 aa9.34□□□□□ -0.91
SMN2-203ENST00000380743 ZNF705DP0CH99 300 aaPredicted RBP9.34□□□□□ -0.91
SMN2-203ENST00000380743 ZNF705BP0CI00 300 aaPredicted RBP9.34□□□□□ -0.91
SMN2-203ENST00000380743 LINC00322Q6ZN03 302 aaPredicted RBP9.34□□□□□ -0.91
SMN2-203ENST00000380743 FOXI2Q6ZQN5 318 aa9.34□□□□□ -0.91
SMN2-203ENST00000380743 LYPD1Q8N2G4 141 aa9.34□□□□□ -0.91
SMN2-203ENST00000380743 RPUSD4Q96CM3 377 aaKnown RBP9.34□□□□□ -0.91
SMN2-203ENST00000380743 Q9H3A6 140 aa9.34□□□□□ -0.91
SMN2-203ENST00000380743 TMEM167BQ9NRX6 74 aa9.34□□□□□ -0.91
SMN2-203ENST00000380743 CLEC5AQ9NY25 188 aa9.34□□□□□ -0.91
SMN2-203ENST00000380743 A0A0J9YX75 114 aa9.33□□□□□ -0.92
SMN2-203ENST00000380743 H3BMM0 161 aa9.33□□□□□ -0.92
SMN2-203ENST00000380743 HLA-DRB4P13762 266 aa9.33□□□□□ -0.92
SMN2-203ENST00000380743 RPL35AP18077 110 aaKnown RBP9.33□□□□□ -0.92
SMN2-203ENST00000380743 STHQ8IWL8 128 aa9.33□□□□□ -0.92
SMN2-203ENST00000380743 AAMDCQ9H7C9 122 aa9.33□□□□□ -0.92
SMN2-203ENST00000380743 HLA-DRB4X5D2U9 266 aa9.33□□□□□ -0.92
SMN2-203ENST00000380743 LOC102724200A0A096LPH7 203 aaPredicted RBP9.32□□□□□ -0.92
SMN2-203ENST00000380743 ZNF705EA8MWA4 302 aaPredicted RBP9.32□□□□□ -0.92
SMN2-203ENST00000380743 CCL20P78556 96 aa9.32□□□□□ -0.92
SMN2-203ENST00000380743 EBLN2Q6P2I7 272 aa9.32□□□□□ -0.92
SMN2-203ENST00000380743 TEX261Q6UWH6 196 aa9.32□□□□□ -0.92
SMN2-203ENST00000380743 TRPT1Q86TN4 253 aaKnown RBP9.32□□□□□ -0.92
SMN2-203ENST00000380743 TRAV1-1A0A0B4J248 108 aa9.31□□□□□ -0.92
SMN2-203ENST00000380743 PGPA6NDG6 321 aa9.31□□□□□ -0.92
SMN2-203ENST00000380743 IGKV3-20P01619 116 aa9.31□□□□□ -0.92
SMN2-203ENST00000380743 UBE2G2P60604 165 aa9.31□□□□□ -0.92
SMN2-203ENST00000380743 OR8A1Q8NGG7 326 aa9.31□□□□□ -0.92
SMN2-203ENST00000380743 MRPL53Q96EL3 112 aaKnown RBP9.31□□□□□ -0.92
SMN2-203ENST00000380743 OTORQ9NRC9 128 aa9.31□□□□□ -0.92
SMN2-203ENST00000380743 PRELID1Q9Y255 219 aa9.31□□□□□ -0.92
SMN2-203ENST00000380743 YTHDF2Q9Y5A9 579 aaKnown RBP9.31□□□□□ -0.92
SMN2-203ENST00000380743 GGTLC3B5MD39 225 aa9.31□□□□□ -0.92
SMN2-203ENST00000380743 CNN1P51911 297 aaKnown RBP9.31□□□□□ -0.92
SMN2-203ENST00000380743 HIST1H1AQ02539 215 aaPredicted RBP9.31□□□□□ -0.92
SMN2-203ENST00000380743 HAGHQ16775 308 aa9.31□□□□□ -0.92
SMN2-203ENST00000380743 SBSPONQ8IVN8 264 aa9.31□□□□□ -0.92
SMN2-203ENST00000380743 ZNF680Q8NEM1 530 aa9.31□□□□□ -0.92
SMN2-203ENST00000380743 OR4B1Q8NGF8 309 aa9.31□□□□□ -0.92
SMN2-203ENST00000380743 TENM3Q9P273 2699 aa9.3□□□□□ -0.92
SMN2-203ENST00000380743 A0A1W2PRE2 83 aa9.3□□□□□ -0.92
SMN2-203ENST00000380743 FAM74A7A6NL05 159 aa9.3□□□□□ -0.92
SMN2-203ENST00000380743 SUMO1P63165 101 aaKnown RBP9.3□□□□□ -0.92
SMN2-203ENST00000380743 ASCL2Q99929 193 aa9.3□□□□□ -0.92
SMN2-203ENST00000380743 IGKV2-40A0A087WW87 121 aaPredicted RBP9.29□□□□□ -0.92
SMN2-203ENST00000380743 DUSP14O95147 198 aaKnown RBP9.29□□□□□ -0.92
SMN2-203ENST00000380743 IGKV2D-40P01614 121 aaPredicted RBP9.29□□□□□ -0.92
SMN2-203ENST00000380743 GIG44P09565 113 aaPredicted RBP9.29□□□□□ -0.92
SMN2-203ENST00000380743 CSN1S1P47710 185 aa9.29□□□□□ -0.92
SMN2-203ENST00000380743 ERCC8Q13216 396 aa9.29□□□□□ -0.92
SMN2-203ENST00000380743 OR10J6PQ8NGY7 276 aa9.29□□□□□ -0.92
SMN2-203ENST00000380743 B9D2Q9BPU9 175 aa9.29□□□□□ -0.92
SMN2-203ENST00000380743 CSTL1Q9H114 145 aa9.29□□□□□ -0.92
SMN2-203ENST00000380743 KIR2DL5BA0A0G2JN68 375 aa9.28□□□□□ -0.92
SMN2-203ENST00000380743 KIR2DL5BA0A0G2JPC4 375 aa9.28□□□□□ -0.92
SMN2-203ENST00000380743 A8MTW9 85 aa9.28□□□□□ -0.92
SMN2-203ENST00000380743 DIRC3C9JPN6 131 aa9.28□□□□□ -0.92
SMN2-203ENST00000380743 PAGE4O60829 102 aa9.28□□□□□ -0.92
SMN2-203ENST00000380743 HBE1P02100 147 aa9.28□□□□□ -0.92
SMN2-203ENST00000380743 SLC25A5P05141 298 aaKnown RBP9.28□□□□□ -0.92
SMN2-203ENST00000380743 APOC4P55056 127 aa9.28□□□□□ -0.92
SMN2-203ENST00000380743 GNG5P63218 68 aa9.28□□□□□ -0.92
SMN2-203ENST00000380743 BLOC1S1P78537 153 aa9.28□□□□□ -0.92
SMN2-203ENST00000380743 AMTNQ6UX39 209 aa9.28□□□□□ -0.92
SMN2-203ENST00000380743 KIR2DL5AQ8N109 375 aa9.28□□□□□ -0.92
SMN2-203ENST00000380743 KIR2DL5BQ8NHK3 375 aa9.28□□□□□ -0.92
SMN2-203ENST00000380743 CMTM2Q8TAZ6 248 aa9.28□□□□□ -0.92
SMN2-203ENST00000380743 RXFP4Q8TDU9 374 aa9.28□□□□□ -0.92
SMN2-203ENST00000380743 CLUHP3Q96NS8 147 aa9.28□□□□□ -0.92
SMN2-203ENST00000380743 VGLL1Q99990 258 aa9.28□□□□□ -0.92
SMN2-203ENST00000380743 NPIPB6E9PJ23 425 aa9.27□□□□□ -0.93
SMN2-203ENST00000380743 TEX46H3BTG2 121 aa9.27□□□□□ -0.93
SMN2-203ENST00000380743 CA1P00915 261 aaPredicted RBP9.27□□□□□ -0.93
SMN2-203ENST00000380743 IFNA7P01567 189 aa9.27□□□□□ -0.93
SMN2-203ENST00000380743 FXYD7P58549 80 aa9.27□□□□□ -0.93
SMN2-203ENST00000380743 CST9LP1Q5W188 147 aa9.27□□□□□ -0.93
SMN2-203ENST00000380743 CCDC28AQ8IWP9 274 aa9.27□□□□□ -0.93
SMN2-203ENST00000380743 C5orf17Q8NAS9 161 aa9.27□□□□□ -0.93
SMN2-203ENST00000380743 LYPD6BQ8NI32 183 aa9.27□□□□□ -0.93
SMN2-203ENST00000380743 PCNPQ8WW12 178 aaKnown RBP9.27□□□□□ -0.93
SMN2-203ENST00000380743 NKX6-2Q9C056 277 aaPredicted RBP9.27□□□□□ -0.93
SMN2-203ENST00000380743 AGPAT4-IT1Q9H0P7 198 aa9.27□□□□□ -0.93
SMN2-203ENST00000380743 SLC35B3Q9H1N7 401 aa9.27□□□□□ -0.93
SMN2-203ENST00000380743 GNG13Q9P2W3 67 aa9.27□□□□□ -0.93
SMN2-203ENST00000380743 RPH3ALQ9UNE2 315 aa9.27□□□□□ -0.93
SMN2-203ENST00000380743 CT45A10P0DMU9 189 aa9.26□□□□□ -0.93
SMN2-203ENST00000380743 PPT1P50897 306 aa9.26□□□□□ -0.93
SMN2-203ENST00000380743 NUTF2P61970 127 aaKnown RBP9.26□□□□□ -0.93
SMN2-203ENST00000380743 MORN3Q6PF18 240 aaPredicted RBP9.26□□□□□ -0.93
SMN2-203ENST00000380743 C9orf47Q6ZRZ4 202 aa9.26□□□□□ -0.93
SMN2-203ENST00000380743 GOLT1AQ6ZVE7 132 aa9.26□□□□□ -0.93
SMN2-203ENST00000380743 ARL6IP6Q8N6S5 226 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms