RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 ZNF785A8K8V0 405 aa17.87■□□□□ 0.45
VPS16-201ENST00000380443 CYSRT1A8MQ03 144 aa17.87■□□□□ 0.45
VPS16-201ENST00000380443 A8MWP6 167 aa17.87■□□□□ 0.45
VPS16-201ENST00000380443 SRIP30626 198 aa17.87■□□□□ 0.45
VPS16-201ENST00000380443 C9orf152Q5JTZ5 239 aa17.87■□□□□ 0.45
VPS16-201ENST00000380443 PRDM13Q9H4Q3 707 aa17.87■□□□□ 0.45
VPS16-201ENST00000380443 CLEC5AQ9NY25 188 aa17.87■□□□□ 0.45
VPS16-201ENST00000380443 U3KQE9 123 aa17.87■□□□□ 0.45
VPS16-201ENST00000380443 A0A1B0GW15 77 aa17.86■□□□□ 0.45
VPS16-201ENST00000380443 CLPSL1A2RUU4 121 aa17.86■□□□□ 0.45
VPS16-201ENST00000380443 LINC00310P59036 64 aa17.86■□□□□ 0.45
VPS16-201ENST00000380443 KLF5Q13887 457 aaPredicted RBP17.86■□□□□ 0.45
VPS16-201ENST00000380443 NRGNQ92686 78 aa17.86■□□□□ 0.45
VPS16-201ENST00000380443 A0A096LNT2 108 aa17.86■□□□□ 0.45
VPS16-201ENST00000380443 A0A1B0GUS0 222 aa17.86■□□□□ 0.45
VPS16-201ENST00000380443 HAX1O00165 279 aa17.86■□□□□ 0.45
VPS16-201ENST00000380443 CHEK1O14757 476 aa17.86■□□□□ 0.45
VPS16-201ENST00000380443 PPIFP30405 207 aaKnown RBP17.86■□□□□ 0.45
VPS16-201ENST00000380443 SLAQ13239 276 aa17.86■□□□□ 0.45
VPS16-201ENST00000380443 RBAKDNA6NC62 111 aa17.85■□□□□ 0.45
VPS16-201ENST00000380443 PKIAP61925 76 aa17.85■□□□□ 0.45
VPS16-201ENST00000380443 LY6EQ16553 131 aa17.85■□□□□ 0.45
VPS16-201ENST00000380443 FAM162BQ5T6X4 162 aa17.85■□□□□ 0.45
VPS16-201ENST00000380443 GDF5OSQ5U4N7 250 aa17.85■□□□□ 0.45
VPS16-201ENST00000380443 MRPL53Q96EL3 112 aaKnown RBP17.85■□□□□ 0.45
VPS16-201ENST00000380443 NOL4LQ96MY1 436 aaPredicted RBP17.85■□□□□ 0.45
VPS16-201ENST00000380443 CSMD2Q7Z408 3487 aa17.85■□□□□ 0.45
VPS16-201ENST00000380443 LOXL1Q08397 574 aaPredicted RBP17.84■□□□□ 0.45
VPS16-201ENST00000380443 KIAA1644Q3SXP7 199 aa17.84■□□□□ 0.45
VPS16-201ENST00000380443 CDPF1Q6NVV7 123 aa17.84■□□□□ 0.45
VPS16-201ENST00000380443 PGLYRP4Q96LB8 373 aa17.84■□□□□ 0.45
VPS16-201ENST00000380443 BEX4Q9NWD9 120 aaPredicted RBP17.84■□□□□ 0.45
VPS16-201ENST00000380443 IGHV3-35A0A0C4DH35 117 aa17.83■□□□□ 0.44
VPS16-201ENST00000380443 CAMPP49913 170 aa17.83■□□□□ 0.44
VPS16-201ENST00000380443 LCN12Q6JVE5 192 aa17.83■□□□□ 0.44
VPS16-201ENST00000380443 KCNS1Q96KK3 526 aa17.83■□□□□ 0.44
VPS16-201ENST00000380443 SAMD10Q9BYL1 202 aa17.83■□□□□ 0.44
VPS16-201ENST00000380443 A0A0G2JLM5 398 aa17.82■□□□□ 0.44
VPS16-201ENST00000380443 TSTD3H0UI37 97 aa17.82■□□□□ 0.44
VPS16-201ENST00000380443 ARL3P36405 182 aa17.82■□□□□ 0.44
VPS16-201ENST00000380443 RIGQ13278 110 aa17.82■□□□□ 0.44
VPS16-201ENST00000380443 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.82■□□□□ 0.44
VPS16-201ENST00000380443 LRRC75A-AS1Q8N1F1 130 aa17.82■□□□□ 0.44
VPS16-201ENST00000380443 SIGLECL1Q8N7X8 197 aa17.82■□□□□ 0.44
VPS16-201ENST00000380443 PRR25Q96S07 402 aa17.82■□□□□ 0.44
VPS16-201ENST00000380443 NDFIP1Q9BT67 221 aa17.82■□□□□ 0.44
VPS16-201ENST00000380443 ZMAT5Q9UDW3 170 aaKnown RBP17.82■□□□□ 0.44
VPS16-201ENST00000380443 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.82■□□□□ 0.44
VPS16-201ENST00000380443 LINC00587B1AMM8 73 aa17.82■□□□□ 0.44
VPS16-201ENST00000380443 NDUFA4O00483 81 aa17.82■□□□□ 0.44
VPS16-201ENST00000380443 AVPP01185 164 aa17.82■□□□□ 0.44
VPS16-201ENST00000380443 BMI1P35226 326 aa17.82■□□□□ 0.44
VPS16-201ENST00000380443 CRIP1P50238 77 aa17.82■□□□□ 0.44
VPS16-201ENST00000380443 RPS20P60866 119 aaKnown RBP17.82■□□□□ 0.44
VPS16-201ENST00000380443 SRSF2Q01130 221 aaKnown RBP17.82■□□□□ 0.44
VPS16-201ENST00000380443 FAM209BQ5JX69 171 aa17.82■□□□□ 0.44
VPS16-201ENST00000380443 ALKBH7Q9BT30 221 aaPredicted RBP17.82■□□□□ 0.44
VPS16-201ENST00000380443 NOTCH2Q04721 2471 aa17.81■□□□□ 0.44
VPS16-201ENST00000380443 IGHG4P01861 327 aa17.81■□□□□ 0.44
VPS16-201ENST00000380443 GPX1P07203 203 aa17.81■□□□□ 0.44
VPS16-201ENST00000380443 GATD1Q8NB37 220 aa17.81■□□□□ 0.44
VPS16-201ENST00000380443 C18orf32Q8TCD1 76 aa17.81■□□□□ 0.44
VPS16-201ENST00000380443 A0A1B0GUT8 65 aa17.8■□□□□ 0.44
VPS16-201ENST00000380443 DMRTA1Q5VZB9 504 aa17.8■□□□□ 0.44
VPS16-201ENST00000380443 ANKRD17O75179 2603 aaKnown RBP17.8■□□□□ 0.44
VPS16-201ENST00000380443 APOHP02749 345 aaPredicted RBP17.79■□□□□ 0.44
VPS16-201ENST00000380443 CYB5R2Q6BCY4 276 aa17.79■□□□□ 0.44
VPS16-201ENST00000380443 BORCS7Q96B45 105 aa17.79■□□□□ 0.44
VPS16-201ENST00000380443 PDZD2O15018 2839 aa17.79■□□□□ 0.44
VPS16-201ENST00000380443 IGKV2-40A0A087WW87 121 aaPredicted RBP17.79■□□□□ 0.44
VPS16-201ENST00000380443 F2Z2F3 143 aa17.79■□□□□ 0.44
VPS16-201ENST00000380443 IGKV2D-40P01614 121 aaPredicted RBP17.79■□□□□ 0.44
VPS16-201ENST00000380443 IGLV1-40P01703 118 aa17.79■□□□□ 0.44
VPS16-201ENST00000380443 LINC00527Q9UJ94 153 aa17.79■□□□□ 0.44
VPS16-201ENST00000380443 IGHV3OR16-8A0A075B7F1 116 aa17.78■□□□□ 0.44
VPS16-201ENST00000380443 A0A1W2PS18 150 aa17.78■□□□□ 0.44
VPS16-201ENST00000380443 TMEM189A5PLL7 270 aa17.78■□□□□ 0.44
VPS16-201ENST00000380443 C8orf49Q96NF6 230 aa17.78■□□□□ 0.44
VPS16-201ENST00000380443 NAGKQ9UJ70 344 aa17.78■□□□□ 0.44
VPS16-201ENST00000380443 SCGB1D1O95968 90 aa17.77■□□□□ 0.44
VPS16-201ENST00000380443 DEFB113Q30KQ7 82 aa17.77■□□□□ 0.44
VPS16-201ENST00000380443 TMEM89A2RUT3 159 aa17.77■□□□□ 0.43
VPS16-201ENST00000380443 SH2D1AO60880 128 aa17.77■□□□□ 0.43
VPS16-201ENST00000380443 ZNF324O75467 553 aaPredicted RBP17.77■□□□□ 0.43
VPS16-201ENST00000380443 CSMD1Q96PZ7 3565 aa17.77■□□□□ 0.43
VPS16-201ENST00000380443 SPG11Q96JI7 2443 aa17.76■□□□□ 0.43
VPS16-201ENST00000380443 POLQO75417 2590 aa17.76■□□□□ 0.43
VPS16-201ENST00000380443 BLCAPP62952 87 aa17.76■□□□□ 0.43
VPS16-201ENST00000380443 CFHR3Q02985 330 aa17.76■□□□□ 0.43
VPS16-201ENST00000380443 Q6ZWC4 215 aa17.76■□□□□ 0.43
VPS16-201ENST00000380443 LURAP1LQ8IV03 231 aa17.76■□□□□ 0.43
VPS16-201ENST00000380443 SSBP4Q9BWG4 385 aaPredicted RBP17.76■□□□□ 0.43
VPS16-201ENST00000380443 TGFAP01135 160 aa17.75■□□□□ 0.43
VPS16-201ENST00000380443 VGLL1Q99990 258 aa17.75■□□□□ 0.43
VPS16-201ENST00000380443 PF4V1P10720 104 aa17.75■□□□□ 0.43
VPS16-201ENST00000380443 AMTP48728 403 aa17.75■□□□□ 0.43
VPS16-201ENST00000380443 C9orf139Q6ZV77 190 aa17.75■□□□□ 0.43
VPS16-201ENST00000380443 GLMPQ8WWB7 406 aa17.75■□□□□ 0.43
VPS16-201ENST00000380443 RCHY1Q96PM5 261 aa17.75■□□□□ 0.43
VPS16-201ENST00000380443 FOXC2Q99958 501 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms