RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 C20orf173Q96LM9 149 aa11.82□□□□□ -0.52
CCDC107-204ENST00000378409 LINC00052Q96N35 136 aa11.82□□□□□ -0.52
CCDC107-204ENST00000378409 ZNF705FA8MVS1 300 aaPredicted RBP11.81□□□□□ -0.52
CCDC107-204ENST00000378409 ZNF688P0C7X2 276 aa11.81□□□□□ -0.52
CCDC107-204ENST00000378409 CSN1S1P47710 185 aa11.81□□□□□ -0.52
CCDC107-204ENST00000378409 SNRPD3P62318 126 aaKnown RBP11.81□□□□□ -0.52
CCDC107-204ENST00000378409 GNG5P63218 68 aa11.81□□□□□ -0.52
CCDC107-204ENST00000378409 CITED4Q96RK1 184 aa11.81□□□□□ -0.52
CCDC107-204ENST00000378409 TREM1Q9NP99 234 aa11.81□□□□□ -0.52
CCDC107-204ENST00000378409 CLEC5AQ9NY25 188 aa11.81□□□□□ -0.52
CCDC107-204ENST00000378409 PRELID1Q9Y255 219 aa11.81□□□□□ -0.52
CCDC107-204ENST00000378409 ZNF256Q9Y2P7 627 aaPredicted RBP11.81□□□□□ -0.52
CCDC107-204ENST00000378409 F6UZH7 168 aa11.8□□□□□ -0.52
CCDC107-204ENST00000378409 PDE6DO43924 150 aa11.8□□□□□ -0.52
CCDC107-204ENST00000378409 S100A1P23297 94 aa11.8□□□□□ -0.52
CCDC107-204ENST00000378409 PSMG4Q5JS54 123 aa11.8□□□□□ -0.52
CCDC107-204ENST00000378409 ZNF738Q8NE65 137 aa11.8□□□□□ -0.52
CCDC107-204ENST00000378409 GPR61Q9BZJ8 451 aa11.8□□□□□ -0.52
CCDC107-204ENST00000378409 EPDR1Q9UM22 224 aa11.8□□□□□ -0.52
CCDC107-204ENST00000378409 TRRAPQ9Y4A5 3859 aa11.8□□□□□ -0.52
CCDC107-204ENST00000378409 ANK2Q01484 3957 aa11.79□□□□□ -0.52
CCDC107-204ENST00000378409 SCO2A0A1W2PP80 73 aa11.79□□□□□ -0.52
CCDC107-204ENST00000378409 C9JQL5 133 aa11.79□□□□□ -0.52
CCDC107-204ENST00000378409 PEX7O00628 323 aa11.79□□□□□ -0.52
CCDC107-204ENST00000378409 CEBPGP53567 150 aa11.79□□□□□ -0.52
CCDC107-204ENST00000378409 EIF4E3Q8N5X7 224 aaKnown RBP11.79□□□□□ -0.52
CCDC107-204ENST00000378409 RPUSD4Q96CM3 377 aaKnown RBP11.79□□□□□ -0.52
CCDC107-204ENST00000378409 MRPL53Q96EL3 112 aaKnown RBP11.79□□□□□ -0.52
CCDC107-204ENST00000378409 TCEAL7Q9BRU2 100 aa11.79□□□□□ -0.52
CCDC107-204ENST00000378409 SMDT1Q9H4I9 107 aa11.79□□□□□ -0.52
CCDC107-204ENST00000378409 PRAC2D3DTV9 90 aa11.78□□□□□ -0.52
CCDC107-204ENST00000378409 TCRAP04437 139 aa11.78□□□□□ -0.52
CCDC107-204ENST00000378409 SRP19P09132 144 aaKnown RBP11.78□□□□□ -0.52
CCDC107-204ENST00000378409 OXLD1Q5BKU9 147 aa11.78□□□□□ -0.52
CCDC107-204ENST00000378409 UQCC3Q6UW78 93 aa11.78□□□□□ -0.52
CCDC107-204ENST00000378409 HIST1H2BAQ96A08 127 aa11.78□□□□□ -0.52
CCDC107-204ENST00000378409 ATG101Q9BSB4 218 aa11.78□□□□□ -0.52
CCDC107-204ENST00000378409 AGRNO00468 2067 aa11.78□□□□□ -0.52
CCDC107-204ENST00000378409 IGKV2-40A0A087WW87 121 aaPredicted RBP11.77□□□□□ -0.53
CCDC107-204ENST00000378409 DIRC3C9JPN6 131 aa11.77□□□□□ -0.53
CCDC107-204ENST00000378409 WIPF1O43516 503 aa11.77□□□□□ -0.53
CCDC107-204ENST00000378409 IGKV2D-40P01614 121 aaPredicted RBP11.77□□□□□ -0.53
CCDC107-204ENST00000378409 DEFB131AP59861 70 aa11.77□□□□□ -0.53
CCDC107-204ENST00000378409 DEFB1P60022 68 aa11.77□□□□□ -0.53
CCDC107-204ENST00000378409 GOLT1AQ6ZVE7 132 aa11.77□□□□□ -0.53
CCDC107-204ENST00000378409 CYB561D1Q8N8Q1 229 aa11.77□□□□□ -0.53
CCDC107-204ENST00000378409 MAP6D1Q9H9H5 199 aa11.77□□□□□ -0.53
CCDC107-204ENST00000378409 TMEM250H0YL14 139 aa11.76□□□□□ -0.53
CCDC107-204ENST00000378409 AKR1C3P42330 323 aa11.76□□□□□ -0.53
CCDC107-204ENST00000378409 BEAN1Q3B7T3 259 aa11.76□□□□□ -0.53
CCDC107-204ENST00000378409 ODF3L2Q3SX64 289 aa11.76□□□□□ -0.53
CCDC107-204ENST00000378409 ARL6IP6Q8N6S5 226 aa11.76□□□□□ -0.53
CCDC107-204ENST00000378409 C11orf52Q96A22 123 aa11.76□□□□□ -0.53
CCDC107-204ENST00000378409 SLC35B3Q9H1N7 401 aa11.76□□□□□ -0.53
CCDC107-204ENST00000378409 OR11H12B2RN74 326 aa11.75□□□□□ -0.53
CCDC107-204ENST00000378409 F6UB75 175 aa11.75□□□□□ -0.53
CCDC107-204ENST00000378409 K7EQM0 130 aa11.75□□□□□ -0.53
CCDC107-204ENST00000378409 NDUFS6O75380 124 aaKnown RBP11.75□□□□□ -0.53
CCDC107-204ENST00000378409 CD7P09564 240 aa11.75□□□□□ -0.53
CCDC107-204ENST00000378409 C2CD4CQ8TF44 421 aa11.75□□□□□ -0.53
CCDC107-204ENST00000378409 LINC00479Q96M42 142 aa11.75□□□□□ -0.53
CCDC107-204ENST00000378409 DERL1Q9BUN8 251 aa11.75□□□□□ -0.53
CCDC107-204ENST00000378409 TRAV34A0A0B4J273 112 aa11.74□□□□□ -0.53
CCDC107-204ENST00000378409 SERTM2A0A1B0GWG4 89 aa11.74□□□□□ -0.53
CCDC107-204ENST00000378409 SFTA3P0C7M3 94 aa11.74□□□□□ -0.53
CCDC107-204ENST00000378409 ZNF705DP0CH99 300 aaPredicted RBP11.74□□□□□ -0.53
CCDC107-204ENST00000378409 ZNF705BP0CI00 300 aaPredicted RBP11.74□□□□□ -0.53
CCDC107-204ENST00000378409 CNN1P51911 297 aaKnown RBP11.74□□□□□ -0.53
CCDC107-204ENST00000378409 CMC4P56277 68 aaPredicted RBP11.74□□□□□ -0.53
CCDC107-204ENST00000378409 ZNF124Q15973 351 aa11.74□□□□□ -0.53
CCDC107-204ENST00000378409 APRG1Q8IVJ8 170 aa11.74□□□□□ -0.53
CCDC107-204ENST00000378409 OR10J6PQ8NGY7 276 aa11.74□□□□□ -0.53
CCDC107-204ENST00000378409 SGK494Q96LW2 274 aa11.74□□□□□ -0.53
CCDC107-204ENST00000378409 VGLL1Q99990 258 aa11.74□□□□□ -0.53
CCDC107-204ENST00000378409 PKD1L1Q8TDX9 2849 aa11.73□□□□□ -0.53
CCDC107-204ENST00000378409 TRAV8-1A0A0A6YYK1 113 aa11.73□□□□□ -0.53
CCDC107-204ENST00000378409 RPL35P42766 123 aaKnown RBP11.73□□□□□ -0.53
CCDC107-204ENST00000378409 UBE2G1P62253 170 aa11.73□□□□□ -0.53
CCDC107-204ENST00000378409 HIST1H1AQ02539 215 aaPredicted RBP11.73□□□□□ -0.53
CCDC107-204ENST00000378409 ZNF674Q2M3X9 581 aa11.73□□□□□ -0.53
CCDC107-204ENST00000378409 GDF5OSQ5U4N7 250 aa11.73□□□□□ -0.53
CCDC107-204ENST00000378409 EBLN2Q6P2I7 272 aa11.73□□□□□ -0.53
CCDC107-204ENST00000378409 GTSCR1Q86UQ5 136 aa11.73□□□□□ -0.53
CCDC107-204ENST00000378409 OR8A1Q8NGG7 326 aa11.73□□□□□ -0.53
CCDC107-204ENST00000378409 PARLQ9H300 379 aa11.73□□□□□ -0.53
CCDC107-204ENST00000378409 CMYA5Q8N3K9 4069 aa11.72□□□□□ -0.53
CCDC107-204ENST00000378409 A0A0J9YX75 114 aa11.72□□□□□ -0.53
CCDC107-204ENST00000378409 RBAKDNA6NC62 111 aa11.72□□□□□ -0.53
CCDC107-204ENST00000378409 KNCNA6PVL3 124 aa11.72□□□□□ -0.53
CCDC107-204ENST00000378409 G3V4G9 280 aa11.72□□□□□ -0.53
CCDC107-204ENST00000378409 ERCC8Q13216 396 aa11.72□□□□□ -0.53
CCDC107-204ENST00000378409 SOHLH1Q5JUK2 328 aa11.72□□□□□ -0.53
CCDC107-204ENST00000378409 FOXI2Q6ZQN5 318 aa11.72□□□□□ -0.53
CCDC107-204ENST00000378409 TMEM75Q8N9X5 138 aa11.72□□□□□ -0.53
CCDC107-204ENST00000378409 FMC1Q96HJ9 113 aa11.72□□□□□ -0.53
CCDC107-204ENST00000378409 SAV1Q9H4B6 383 aaPredicted RBP11.72□□□□□ -0.53
CCDC107-204ENST00000378409 TMEM218A2RU14 115 aa11.71□□□□□ -0.53
CCDC107-204ENST00000378409 KRBOX1C9JBD0 128 aa11.71□□□□□ -0.53
CCDC107-204ENST00000378409 NPIPB6E9PJ23 425 aa11.71□□□□□ -0.53
CCDC107-204ENST00000378409 IGLV2-11P01706 119 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms