RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 SCRT2Q9NQ03 307 aa11.41□□□□□ -0.58
TRIM13-202ENST00000378182 RNF126Q9BV68 326 aa11.41□□□□□ -0.58
TRIM13-202ENST00000378182 NOP10Q9NPE3 64 aaKnown RBP11.41□□□□□ -0.58
TRIM13-202ENST00000378182 Q6ZS92 163 aa11.41□□□□□ -0.58
TRIM13-202ENST00000378182 IGFBPL1Q8WX77 278 aa11.41□□□□□ -0.58
TRIM13-202ENST00000378182 C5orf63A6NC05 138 aa11.41□□□□□ -0.58
TRIM13-202ENST00000378182 OOSP1A8MZH6 123 aa11.41□□□□□ -0.58
TRIM13-202ENST00000378182 AMN1Q8IY45 258 aa11.41□□□□□ -0.58
TRIM13-202ENST00000378182 GNB1LQ9BYB4 327 aa11.41□□□□□ -0.58
TRIM13-202ENST00000378182 IGHV2-70DA0A0C4DH43 119 aa11.41□□□□□ -0.58
TRIM13-202ENST00000378182 LINC00473A8K010 186 aa11.41□□□□□ -0.58
TRIM13-202ENST00000378182 CRYGSP22914 178 aa11.4□□□□□ -0.58
TRIM13-202ENST00000378182 HGFACQ04756 655 aa11.4□□□□□ -0.58
TRIM13-202ENST00000378182 TRPT1Q86TN4 253 aaKnown RBP11.4□□□□□ -0.58
TRIM13-202ENST00000378182 ZGRF1Q86YA3 2104 aa11.4□□□□□ -0.58
TRIM13-202ENST00000378182 TRAV26-2A0A0B4J265 109 aa11.4□□□□□ -0.58
TRIM13-202ENST00000378182 MMP23AO75900 390 aa11.4□□□□□ -0.58
TRIM13-202ENST00000378182 DNAJC30Q96LL9 226 aa11.4□□□□□ -0.58
TRIM13-202ENST00000378182 ARMS2P0C7Q2 107 aa11.4□□□□□ -0.58
TRIM13-202ENST00000378182 RSPO3Q9BXY4 272 aaPredicted RBP11.4□□□□□ -0.58
TRIM13-202ENST00000378182 TMEM242Q9NWH2 141 aa11.4□□□□□ -0.58
TRIM13-202ENST00000378182 VWA8A3KMH1 1905 aa11.4□□□□□ -0.58
TRIM13-202ENST00000378182 NUP35Q8NFH5 326 aa11.4□□□□□ -0.58
TRIM13-202ENST00000378182 TIMM17AQ99595 171 aa11.4□□□□□ -0.58
TRIM13-202ENST00000378182 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.4□□□□□ -0.59
TRIM13-202ENST00000378182 ZNF581Q9P0T4 197 aa11.39□□□□□ -0.59
TRIM13-202ENST00000378182 SEC11AP67812 179 aa11.39□□□□□ -0.59
TRIM13-202ENST00000378182 TMEM243Q9BU79 118 aa11.39□□□□□ -0.59
TRIM13-202ENST00000378182 IGLV3-32A0A0A0MS00 114 aa11.39□□□□□ -0.59
TRIM13-202ENST00000378182 TRAV9-1A0A075B6T8 112 aa11.39□□□□□ -0.59
TRIM13-202ENST00000378182 FAM90A9PA6NNJ1 464 aa11.39□□□□□ -0.59
TRIM13-202ENST00000378182 XCL1P47992 114 aa11.39□□□□□ -0.59
TRIM13-202ENST00000378182 ZSWIM8A7E2V4 1837 aa11.39□□□□□ -0.59
TRIM13-202ENST00000378182 FBLIM1Q8WUP2 373 aa11.39□□□□□ -0.59
TRIM13-202ENST00000378182 CACNA1EQ15878 2313 aa11.38□□□□□ -0.59
TRIM13-202ENST00000378182 CCL24O00175 119 aa11.38□□□□□ -0.59
TRIM13-202ENST00000378182 NRGNQ92686 78 aa11.38□□□□□ -0.59
TRIM13-202ENST00000378182 ESM1Q9NQ30 184 aa11.38□□□□□ -0.59
TRIM13-202ENST00000378182 TSSC4Q9Y5U2 329 aaPredicted RBP11.38□□□□□ -0.59
TRIM13-202ENST00000378182 A0A087X0K7 114 aa11.38□□□□□ -0.59
TRIM13-202ENST00000378182 NTF4P34130 210 aa11.38□□□□□ -0.59
TRIM13-202ENST00000378182 NEGR1Q7Z3B1 354 aa11.38□□□□□ -0.59
TRIM13-202ENST00000378182 SMIM2Q9BVW6 85 aa11.38□□□□□ -0.59
TRIM13-202ENST00000378182 LAMTOR2Q9Y2Q5 125 aa11.38□□□□□ -0.59
TRIM13-202ENST00000378182 LINC00518Q8N0U6 118 aa11.38□□□□□ -0.59
TRIM13-202ENST00000378182 GAS1P54826 345 aa11.38□□□□□ -0.59
TRIM13-202ENST00000378182 PRB2P02812 416 aaPredicted RBP11.37□□□□□ -0.59
TRIM13-202ENST00000378182 GUSBP1Q15486 140 aa11.37□□□□□ -0.59
TRIM13-202ENST00000378182 TP53TG1Q9Y2A0 90 aa11.37□□□□□ -0.59
TRIM13-202ENST00000378182 TEX36Q5VZQ5 186 aa11.37□□□□□ -0.59
TRIM13-202ENST00000378182 BCL6BQ8N143 479 aaPredicted RBP11.37□□□□□ -0.59
TRIM13-202ENST00000378182 DUX4L9Q6RFH8 374 aaPredicted RBP11.37□□□□□ -0.59
TRIM13-202ENST00000378182 TEX48A0A1B0GUV7 120 aa11.37□□□□□ -0.59
TRIM13-202ENST00000378182 F8W735 103 aaPredicted RBP11.37□□□□□ -0.59
TRIM13-202ENST00000378182 NDUFB8O95169 186 aa11.37□□□□□ -0.59
TRIM13-202ENST00000378182 TCF15Q12870 199 aa11.37□□□□□ -0.59
TRIM13-202ENST00000378182 LY6G5BQ8NDX9 201 aa11.37□□□□□ -0.59
TRIM13-202ENST00000378182 IGHG3P01860 377 aa11.37□□□□□ -0.59
TRIM13-202ENST00000378182 GLRX5Q86SX6 157 aa11.37□□□□□ -0.59
TRIM13-202ENST00000378182 TMEM170AQ8WVE7 144 aa11.37□□□□□ -0.59
TRIM13-202ENST00000378182 KIAA1671Q9BY89 1806 aa11.37□□□□□ -0.59
TRIM13-202ENST00000378182 PCP4P48539 62 aa11.36□□□□□ -0.59
TRIM13-202ENST00000378182 SIPA1L1O43166 1804 aa11.36□□□□□ -0.59
TRIM13-202ENST00000378182 A0A1B0GUS0 222 aa11.36□□□□□ -0.59
TRIM13-202ENST00000378182 LINC00479Q96M42 142 aa11.36□□□□□ -0.59
TRIM13-202ENST00000378182 KLHDC3Q9BQ90 382 aa11.36□□□□□ -0.59
TRIM13-202ENST00000378182 IGHV3-30P01768 117 aa11.36□□□□□ -0.59
TRIM13-202ENST00000378182 IGHV3-33P01772 117 aa11.36□□□□□ -0.59
TRIM13-202ENST00000378182 IGHV3-30-3P0DP02 117 aa11.36□□□□□ -0.59
TRIM13-202ENST00000378182 IGHV3-30-5P0DP03 117 aa11.36□□□□□ -0.59
TRIM13-202ENST00000378182 COX11Q9Y6N1 276 aa11.36□□□□□ -0.59
TRIM13-202ENST00000378182 APRG1Q8IVJ8 170 aa11.36□□□□□ -0.59
TRIM13-202ENST00000378182 PLXNA3P51805 1871 aa11.35□□□□□ -0.59
TRIM13-202ENST00000378182 LMO1P25800 156 aa11.35□□□□□ -0.59
TRIM13-202ENST00000378182 RNF222A6NCQ9 220 aa11.35□□□□□ -0.59
TRIM13-202ENST00000378182 AGMATQ9BSE5 352 aa11.35□□□□□ -0.59
TRIM13-202ENST00000378182 I3L3M4 83 aa11.35□□□□□ -0.59
TRIM13-202ENST00000378182 C8orf86Q6ZUL3 223 aa11.35□□□□□ -0.59
TRIM13-202ENST00000378182 DSCR8Q96T75 97 aa11.35□□□□□ -0.59
TRIM13-202ENST00000378182 RLFQ13129 1914 aa11.35□□□□□ -0.59
TRIM13-202ENST00000378182 Q6P435 159 aa11.35□□□□□ -0.59
TRIM13-202ENST00000378182 RNF5Q99942 180 aa11.35□□□□□ -0.59
TRIM13-202ENST00000378182 SPINK8P0C7L1 97 aa11.35□□□□□ -0.59
TRIM13-202ENST00000378182 A0A087WWC5 75 aa11.34□□□□□ -0.59
TRIM13-202ENST00000378182 IGHV4-59P01825 116 aa11.34□□□□□ -0.59
TRIM13-202ENST00000378182 HLA-DRB4P13762 266 aa11.34□□□□□ -0.59
TRIM13-202ENST00000378182 HLA-DRB4X5D2U9 266 aa11.34□□□□□ -0.59
TRIM13-202ENST00000378182 ZNF407Q9C0G0 2248 aa11.34□□□□□ -0.59
TRIM13-202ENST00000378182 DEFB112Q30KQ8 113 aa11.34□□□□□ -0.59
TRIM13-202ENST00000378182 OVOL2Q9BRP0 275 aa11.34□□□□□ -0.59
TRIM13-202ENST00000378182 BUB3O43684 328 aa11.34□□□□□ -0.59
TRIM13-202ENST00000378182 RNF144BQ7Z419 303 aa11.34□□□□□ -0.59
TRIM13-202ENST00000378182 A0A1W2PPI3 338 aa11.33□□□□□ -0.59
TRIM13-202ENST00000378182 C9JAW5 83 aa11.33□□□□□ -0.59
TRIM13-202ENST00000378182 IGHV4-28A0A0C4DH34 117 aa11.33□□□□□ -0.6
TRIM13-202ENST00000378182 AMBPP02760 352 aa11.33□□□□□ -0.6
TRIM13-202ENST00000378182 HAMPP81172 84 aa11.33□□□□□ -0.6
TRIM13-202ENST00000378182 TMEM213A2RRL7 107 aa11.33□□□□□ -0.6
TRIM13-202ENST00000378182 ASPHD1Q5U4P2 390 aa11.33□□□□□ -0.6
TRIM13-202ENST00000378182 EML6Q6ZMW3 1958 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms