RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 ZNF471Q9BX82 626 aaPredicted RBP9.7□□□□□ -0.86
CKAP2-202ENST00000378034 GIG44P09565 113 aaPredicted RBP9.69□□□□□ -0.86
CKAP2-202ENST00000378034 SEC11BP0C7V7 166 aa9.69□□□□□ -0.86
CKAP2-202ENST00000378034 STAG3L2P0CL84 134 aa9.69□□□□□ -0.86
CKAP2-202ENST00000378034 STAG3L3P0CL85 134 aa9.69□□□□□ -0.86
CKAP2-202ENST00000378034 LGALSLQ3ZCW2 172 aaPredicted RBP9.69□□□□□ -0.86
CKAP2-202ENST00000378034 RAB24Q969Q5 203 aa9.69□□□□□ -0.86
CKAP2-202ENST00000378034 RETNQ9HD89 108 aa9.69□□□□□ -0.86
CKAP2-202ENST00000378034 CNN1P51911 297 aaKnown RBP9.68□□□□□ -0.86
CKAP2-202ENST00000378034 NKX2-5P52952 324 aaPredicted RBP9.68□□□□□ -0.86
CKAP2-202ENST00000378034 ZFP69Q49AA0 526 aa9.68□□□□□ -0.86
CKAP2-202ENST00000378034 RGS13O14921 159 aa9.68□□□□□ -0.86
CKAP2-202ENST00000378034 TPT1P13693 172 aaKnown RBP9.68□□□□□ -0.86
CKAP2-202ENST00000378034 C4BPBP20851 252 aa9.68□□□□□ -0.86
CKAP2-202ENST00000378034 BAP18Q8IXM2 172 aa9.68□□□□□ -0.86
CKAP2-202ENST00000378034 OR10J6PQ8NGY7 276 aa9.68□□□□□ -0.86
CKAP2-202ENST00000378034 STOML3Q8TAV4 291 aa9.68□□□□□ -0.86
CKAP2-202ENST00000378034 CTXND1A0A1B0GTU2 59 aa9.67□□□□□ -0.86
CKAP2-202ENST00000378034 ZNF705FA8MVS1 300 aaPredicted RBP9.67□□□□□ -0.86
CKAP2-202ENST00000378034 UMAD1C9J7I0 102 aa9.67□□□□□ -0.86
CKAP2-202ENST00000378034 CXorf1O96002 111 aa9.67□□□□□ -0.86
CKAP2-202ENST00000378034 IGKV3-20P01619 116 aa9.67□□□□□ -0.86
CKAP2-202ENST00000378034 AMBPP02760 352 aa9.67□□□□□ -0.86
CKAP2-202ENST00000378034 IFITM2Q01629 132 aa9.67□□□□□ -0.86
CKAP2-202ENST00000378034 HIST1H1AQ02539 215 aaPredicted RBP9.67□□□□□ -0.86
CKAP2-202ENST00000378034 NBEAL2Q6ZNJ1 2754 aa9.67□□□□□ -0.86
CKAP2-202ENST00000378034 ARL14EPLP0DKL9 152 aa9.66□□□□□ -0.86
CKAP2-202ENST00000378034 ICAM4Q14773 271 aa9.66□□□□□ -0.86
CKAP2-202ENST00000378034 AMTNQ6UX39 209 aa9.66□□□□□ -0.86
CKAP2-202ENST00000378034 EXOC3-AS1Q8N2X6 119 aa9.66□□□□□ -0.86
CKAP2-202ENST00000378034 CSNK1G2-AS1Q8NCQ2 148 aa9.66□□□□□ -0.86
CKAP2-202ENST00000378034 SUN5Q8TC36 379 aa9.66□□□□□ -0.86
CKAP2-202ENST00000378034 PHYHIPLQ96FC7 376 aa9.66□□□□□ -0.86
CKAP2-202ENST00000378034 RANP62826 216 aaKnown RBP9.66□□□□□ -0.86
CKAP2-202ENST00000378034 EIF5AL1Q6IS14 154 aaKnown RBP9.66□□□□□ -0.86
CKAP2-202ENST00000378034 WWC2-AS2Q96NR7 200 aa9.66□□□□□ -0.86
CKAP2-202ENST00000378034 TMEM167BQ9NRX6 74 aa9.66□□□□□ -0.86
CKAP2-202ENST00000378034 HMGB3O15347 200 aaKnown RBP9.65□□□□□ -0.86
CKAP2-202ENST00000378034 EIF3GO75821 320 aaKnown RBP eCLIP9.65□□□□□ -0.86
CKAP2-202ENST00000378034 ZNF705DP0CH99 300 aaPredicted RBP9.65□□□□□ -0.86
CKAP2-202ENST00000378034 ZNF705BP0CI00 300 aaPredicted RBP9.65□□□□□ -0.86
CKAP2-202ENST00000378034 GCHFRP30047 84 aa9.65□□□□□ -0.86
CKAP2-202ENST00000378034 FAM74A1Q5RGS3 127 aa9.65□□□□□ -0.86
CKAP2-202ENST00000378034 DPPA3Q6W0C5 159 aa9.65□□□□□ -0.86
CKAP2-202ENST00000378034 ARL6IP6Q8N6S5 226 aa9.65□□□□□ -0.86
CKAP2-202ENST00000378034 RARRES2Q99969 163 aa9.65□□□□□ -0.86
CKAP2-202ENST00000378034 SLC35B3Q9H1N7 401 aa9.65□□□□□ -0.86
CKAP2-202ENST00000378034 Q9H3A6 140 aa9.65□□□□□ -0.86
CKAP2-202ENST00000378034 OTORQ9NRC9 128 aa9.65□□□□□ -0.86
CKAP2-202ENST00000378034 PPP1R14DQ9NXH3 145 aa9.65□□□□□ -0.86
CKAP2-202ENST00000378034 XCL2Q9UBD3 114 aa9.65□□□□□ -0.86
CKAP2-202ENST00000378034 TENM3Q9P273 2699 aa9.65□□□□□ -0.86
CKAP2-202ENST00000378034 PRAC2D3DTV9 90 aa9.64□□□□□ -0.87
CKAP2-202ENST00000378034 NPIPB6E9PJ23 425 aa9.64□□□□□ -0.87
CKAP2-202ENST00000378034 M0R3E3 92 aa9.64□□□□□ -0.87
CKAP2-202ENST00000378034 CSN1S1P47710 185 aa9.64□□□□□ -0.87
CKAP2-202ENST00000378034 ZNF726P1Q15940 193 aa9.64□□□□□ -0.87
CKAP2-202ENST00000378034 NDUFA5Q16718 116 aa9.64□□□□□ -0.87
CKAP2-202ENST00000378034 SLC51BQ86UW2 128 aa9.64□□□□□ -0.87
CKAP2-202ENST00000378034 OR11H2Q8NH07 326 aa9.64□□□□□ -0.87
CKAP2-202ENST00000378034 RXFP4Q8TDU9 374 aa9.64□□□□□ -0.87
CKAP2-202ENST00000378034 ZNF705EA8MWA4 302 aaPredicted RBP9.64□□□□□ -0.87
CKAP2-202ENST00000378034 C9orf62Q8N4C0 152 aa9.64□□□□□ -0.87
CKAP2-202ENST00000378034 ODF3Q96PU9 254 aa9.64□□□□□ -0.87
CKAP2-202ENST00000378034 EDA2RQ9HAV5 297 aa9.64□□□□□ -0.87
CKAP2-202ENST00000378034 TSPOP30536 169 aa9.63□□□□□ -0.87
CKAP2-202ENST00000378034 FXYD7P58549 80 aa9.63□□□□□ -0.87
CKAP2-202ENST00000378034 SSX7Q7RTT5 188 aa9.63□□□□□ -0.87
CKAP2-202ENST00000378034 IGF2BP2-AS1Q96M15 143 aa9.63□□□□□ -0.87
CKAP2-202ENST00000378034 LINC00477Q96M19 166 aa9.63□□□□□ -0.87
CKAP2-202ENST00000378034 RBAKDNA6NC62 111 aa9.63□□□□□ -0.87
CKAP2-202ENST00000378034 C9orf47Q6ZRZ4 202 aa9.63□□□□□ -0.87
CKAP2-202ENST00000378034 STAB2Q8WWQ8 2551 aa9.62□□□□□ -0.87
CKAP2-202ENST00000378034 MAP1LC3B2A6NCE7 125 aa9.62□□□□□ -0.87
CKAP2-202ENST00000378034 PGPA6NDG6 321 aa9.62□□□□□ -0.87
CKAP2-202ENST00000378034 SLC25A5P05141 298 aaKnown RBP9.62□□□□□ -0.87
CKAP2-202ENST00000378034 MIFP14174 115 aa9.62□□□□□ -0.87
CKAP2-202ENST00000378034 CDKN1BP46527 198 aa9.62□□□□□ -0.87
CKAP2-202ENST00000378034 RAB5CP51148 216 aa9.62□□□□□ -0.87
CKAP2-202ENST00000378034 SPINK13Q1W4C9 94 aa9.62□□□□□ -0.87
CKAP2-202ENST00000378034 ZNF705AQ6ZN79 300 aaPredicted RBP9.62□□□□□ -0.87
CKAP2-202ENST00000378034 CMTM2Q8TAZ6 248 aa9.62□□□□□ -0.87
CKAP2-202ENST00000378034 TMED6Q8WW62 240 aa9.62□□□□□ -0.87
CKAP2-202ENST00000378034 NEU1Q99519 415 aa9.62□□□□□ -0.87
CKAP2-202ENST00000378034 MAP1LC3BQ9GZQ8 125 aa9.62□□□□□ -0.87
CKAP2-202ENST00000378034 PLA2G2EQ9NZK7 142 aa9.62□□□□□ -0.87
CKAP2-202ENST00000378034 GOLT1BQ9Y3E0 138 aa9.62□□□□□ -0.87
CKAP2-202ENST00000378034 HUWE1Q7Z6Z7 4374 aaKnown RBP9.62□□□□□ -0.87
CKAP2-202ENST00000378034 SMIM9A6NGZ8 99 aa9.61□□□□□ -0.87
CKAP2-202ENST00000378034 INSP01308 110 aa9.61□□□□□ -0.87
CKAP2-202ENST00000378034 LEPP41159 167 aa9.61□□□□□ -0.87
CKAP2-202ENST00000378034 MBD3L1Q8WWY6 194 aa9.61□□□□□ -0.87
CKAP2-202ENST00000378034 A0A1W2PRE2 83 aa9.61□□□□□ -0.87
CKAP2-202ENST00000378034 DIRC3C9JPN6 131 aa9.61□□□□□ -0.87
CKAP2-202ENST00000378034 M0R2Z0 102 aa9.61□□□□□ -0.87
CKAP2-202ENST00000378034 CRXO43186 299 aaPredicted RBP9.61□□□□□ -0.87
CKAP2-202ENST00000378034 CT45A10P0DMU9 189 aa9.61□□□□□ -0.87
CKAP2-202ENST00000378034 TMEM78Q5T7P6 136 aa9.61□□□□□ -0.87
CKAP2-202ENST00000378034 FAM213BQ8TBF2 198 aa9.61□□□□□ -0.87
CKAP2-202ENST00000378034 AGPAT4-IT1Q9H0P7 198 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms