RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 PRB4P10163 310 aaPredicted RBP15.7■□□□□ 0.1
PCDH8-202ENST00000377942 SPOCK3Q9BQ16 436 aa15.7■□□□□ 0.1
PCDH8-202ENST00000377942 FGF23Q9GZV9 251 aaPredicted RBP15.69■□□□□ 0.1
PCDH8-202ENST00000377942 MRPL27Q9P0M9 148 aaKnown RBP15.69■□□□□ 0.1
PCDH8-202ENST00000377942 UBE2E2Q96LR5 201 aa15.69■□□□□ 0.1
PCDH8-202ENST00000377942 ACACBO00763 2458 aa15.69■□□□□ 0.1
PCDH8-202ENST00000377942 H3BRN7 92 aa15.69■□□□□ 0.1
PCDH8-202ENST00000377942 MRPL16Q9NX20 251 aaKnown RBP15.69■□□□□ 0.1
PCDH8-202ENST00000377942 IGKCP01834 107 aa15.68■□□□□ 0.1
PCDH8-202ENST00000377942 FXYD7P58549 80 aa15.68■□□□□ 0.1
PCDH8-202ENST00000377942 PLP1P60201 277 aa15.68■□□□□ 0.1
PCDH8-202ENST00000377942 RNF182Q8N6D2 247 aa15.68■□□□□ 0.1
PCDH8-202ENST00000377942 MCRIP2Q9BUT9 160 aaKnown RBP15.68■□□□□ 0.1
PCDH8-202ENST00000377942 NCR2O95944 276 aa15.68■□□□□ 0.1
PCDH8-202ENST00000377942 TMEM249Q2WGJ8 235 aa15.68■□□□□ 0.1
PCDH8-202ENST00000377942 CT83Q5H943 113 aa15.68■□□□□ 0.1
PCDH8-202ENST00000377942 VPREB3Q9UKI3 123 aa15.68■□□□□ 0.1
PCDH8-202ENST00000377942 DEFB121Q5J5C9 76 aa15.68■□□□□ 0.1
PCDH8-202ENST00000377942 GFI1BQ5VTD9 330 aa15.68■□□□□ 0.1
PCDH8-202ENST00000377942 UBE2CO00762 179 aa15.67■□□□□ 0.1
PCDH8-202ENST00000377942 IGLC1P0CG04 106 aa15.67■□□□□ 0.1
PCDH8-202ENST00000377942 ERCC8Q13216 396 aa15.67■□□□□ 0.1
PCDH8-202ENST00000377942 MST1LQ2TV78 715 aa15.67■□□□□ 0.1
PCDH8-202ENST00000377942 SEC11AP67812 179 aa15.67■□□□□ 0.1
PCDH8-202ENST00000377942 RBMY1BA6NDE4 496 aaKnown RBP15.67■□□□□ 0.1
PCDH8-202ENST00000377942 RBMY1EA6NEQ0 496 aaKnown RBP15.67■□□□□ 0.1
PCDH8-202ENST00000377942 RBMY1DP0C7P1 496 aaKnown RBP15.67■□□□□ 0.1
PCDH8-202ENST00000377942 RBMY1A1P0DJD3 496 aaKnown RBP15.67■□□□□ 0.1
PCDH8-202ENST00000377942 RBMY1CP0DJD4 496 aa15.67■□□□□ 0.1
PCDH8-202ENST00000377942 TCTEX1D4Q5JR98 221 aa15.66■□□□□ 0.1
PCDH8-202ENST00000377942 SLC25A2Q9BXI2 301 aa15.66■□□□□ 0.1
PCDH8-202ENST00000377942 C14orf178Q8N769 122 aaPredicted RBP15.66■□□□□ 0.1
PCDH8-202ENST00000377942 RHODO00212 210 aa15.66■□□□□ 0.1
PCDH8-202ENST00000377942 ST6GALNAC6Q969X2 333 aa15.66■□□□□ 0.1
PCDH8-202ENST00000377942 IGHV4-61A0A0C4DH41 118 aa15.66■□□□□ 0.1
PCDH8-202ENST00000377942 HOXA3O43365 443 aaPredicted RBP15.66■□□□□ 0.1
PCDH8-202ENST00000377942 SNAI2O43623 268 aa15.66■□□□□ 0.1
PCDH8-202ENST00000377942 ARMS2P0C7Q2 107 aa15.66■□□□□ 0.1
PCDH8-202ENST00000377942 VGLL1Q99990 258 aa15.66■□□□□ 0.1
PCDH8-202ENST00000377942 PFN1P07737 140 aaKnown RBP15.65■□□□□ 0.1
PCDH8-202ENST00000377942 FAM120AOSQ5T036 256 aa15.65■□□□□ 0.1
PCDH8-202ENST00000377942 C8orf86Q6ZUL3 223 aa15.65■□□□□ 0.1
PCDH8-202ENST00000377942 LINC00479Q96M42 142 aa15.65■□□□□ 0.1
PCDH8-202ENST00000377942 HIST1H2BLQ99880 126 aa15.65■□□□□ 0.1
PCDH8-202ENST00000377942 DEFB112Q30KQ8 113 aa15.65■□□□□ 0.1
PCDH8-202ENST00000377942 LINC00469Q8N7U9 141 aa15.65■□□□□ 0.1
PCDH8-202ENST00000377942 GHRHP01286 108 aa15.64■□□□□ 0.09
PCDH8-202ENST00000377942 RNASE1P07998 156 aaKnown RBP15.64■□□□□ 0.09
PCDH8-202ENST00000377942 OBSL1O75147 1896 aa15.64■□□□□ 0.09
PCDH8-202ENST00000377942 IGHV4-39P01824 125 aa15.64■□□□□ 0.09
PCDH8-202ENST00000377942 C10orf105Q8TEF2 133 aa15.64■□□□□ 0.09
PCDH8-202ENST00000377942 CENPVL3A0A0U1RRI6 287 aa15.64■□□□□ 0.09
PCDH8-202ENST00000377942 MS4A6AQ9H2W1 248 aa15.64■□□□□ 0.09
PCDH8-202ENST00000377942 PTPRQQ9UMZ3 2332 aa15.64■□□□□ 0.09
PCDH8-202ENST00000377942 LYPD6Q86Y78 171 aa15.64■□□□□ 0.09
PCDH8-202ENST00000377942 HIST3H2BBQ8N257 126 aa15.64■□□□□ 0.09
PCDH8-202ENST00000377942 IL15RAQ13261 267 aa15.63■□□□□ 0.09
PCDH8-202ENST00000377942 OR5A1Q8NGJ0 315 aa15.63■□□□□ 0.09
PCDH8-202ENST00000377942 PLNP26678 52 aa15.63■□□□□ 0.09
PCDH8-202ENST00000377942 Q8NA96 180 aa15.63■□□□□ 0.09
PCDH8-202ENST00000377942 IGHV3-73A0A0B4J1V6 119 aa15.63■□□□□ 0.09
PCDH8-202ENST00000377942 SPRNQ5BIV9 151 aa15.63■□□□□ 0.09
PCDH8-202ENST00000377942 NOTCH3Q9UM47 2321 aa15.63■□□□□ 0.09
PCDH8-202ENST00000377942 TRBV7-9A0A0J9YWB2 115 aa15.63■□□□□ 0.09
PCDH8-202ENST00000377942 IGLC7A0M8Q6 106 aa15.62■□□□□ 0.09
PCDH8-202ENST00000377942 IGKV3D-20A0A0C4DH25 116 aa15.62■□□□□ 0.09
PCDH8-202ENST00000377942 IGHV7-4-1A0A0J9YVY3 117 aa15.62■□□□□ 0.09
PCDH8-202ENST00000377942 MORN3Q6PF18 240 aaPredicted RBP15.62■□□□□ 0.09
PCDH8-202ENST00000377942 APOMO95445 188 aa15.62■□□□□ 0.09
PCDH8-202ENST00000377942 PRB1P04280 392 aa15.62■□□□□ 0.09
PCDH8-202ENST00000377942 HAPLN4Q86UW8 402 aa15.62■□□□□ 0.09
PCDH8-202ENST00000377942 CSTL1Q9H114 145 aa15.62■□□□□ 0.09
PCDH8-202ENST00000377942 IGHV4-30-2A0A087WSY4 118 aa15.61■□□□□ 0.09
PCDH8-202ENST00000377942 TEX43Q6ZNM6 134 aa15.61■□□□□ 0.09
PCDH8-202ENST00000377942 LINC00587B1AMM8 73 aa15.61■□□□□ 0.09
PCDH8-202ENST00000377942 IGHV3-53P01767 116 aa15.61■□□□□ 0.09
PCDH8-202ENST00000377942 SHANK1Q9Y566 2161 aa15.61■□□□□ 0.09
PCDH8-202ENST00000377942 PRR20EP86478 221 aa15.6■□□□□ 0.09
PCDH8-202ENST00000377942 PRR20CP86479 221 aa15.6■□□□□ 0.09
PCDH8-202ENST00000377942 PRR20DP86480 221 aa15.6■□□□□ 0.09
PCDH8-202ENST00000377942 PRR20BP86481 221 aa15.6■□□□□ 0.09
PCDH8-202ENST00000377942 PRR20AP86496 221 aa15.6■□□□□ 0.09
PCDH8-202ENST00000377942 UBE2DNLQ8IWF7 75 aa15.6■□□□□ 0.09
PCDH8-202ENST00000377942 NPBQ8NG41 125 aa15.6■□□□□ 0.09
PCDH8-202ENST00000377942 IGHV4-59P01825 116 aa15.6■□□□□ 0.09
PCDH8-202ENST00000377942 FAM231DQ6ZW35 169 aa15.6■□□□□ 0.09
PCDH8-202ENST00000377942 GSN-AS1Q9NRJ2 163 aa15.6■□□□□ 0.09
PCDH8-202ENST00000377942 ADAMTS9Q9P2N4 1935 aa15.6■□□□□ 0.09
PCDH8-202ENST00000377942 ZNF815PA8K554 130 aa15.6■□□□□ 0.09
PCDH8-202ENST00000377942 TRPT1Q86TN4 253 aaKnown RBP15.6■□□□□ 0.09
PCDH8-202ENST00000377942 AMN1Q8IY45 258 aa15.6■□□□□ 0.09
PCDH8-202ENST00000377942 OR2K2Q8NGT1 345 aa15.6■□□□□ 0.09
PCDH8-202ENST00000377942 PLEKHB2Q96CS7 222 aa15.6■□□□□ 0.09
PCDH8-202ENST00000377942 PRR25Q96S07 402 aa15.6■□□□□ 0.09
PCDH8-202ENST00000377942 XCL2Q9UBD3 114 aa15.6■□□□□ 0.09
PCDH8-202ENST00000377942 ZNF491Q8N8L2 437 aa15.59■□□□□ 0.09
PCDH8-202ENST00000377942 PRSS46E5RG02 174 aa15.59■□□□□ 0.09
PCDH8-202ENST00000377942 ZNF726P1Q15940 193 aa15.59■□□□□ 0.09
PCDH8-202ENST00000377942 SPINK13Q1W4C9 94 aa15.59■□□□□ 0.09
PCDH8-202ENST00000377942 TMEM86BQ8N661 226 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms