RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 PYY3Q5JQD4 70 aa9.53□□□□□ -0.88
VPS13A-205ENST00000376636 ATOX1O00244 68 aa9.53□□□□□ -0.88
VPS13A-205ENST00000376636 A0A0G2JMZ2 1700 aa9.53□□□□□ -0.88
VPS13A-205ENST00000376636 LRRC37A2A6NM11 1700 aa9.53□□□□□ -0.88
VPS13A-205ENST00000376636 LRRC37AA6NMS7 1700 aa9.53□□□□□ -0.88
VPS13A-205ENST00000376636 FAM201AQ5SY85 155 aa9.53□□□□□ -0.88
VPS13A-205ENST00000376636 BMPERQ8N8U9 685 aa9.53□□□□□ -0.88
VPS13A-205ENST00000376636 ETDBQ3ZM63 59 aa9.53□□□□□ -0.88
VPS13A-205ENST00000376636 FAM104BQ5XKR9 115 aa9.53□□□□□ -0.88
VPS13A-205ENST00000376636 GLRX5Q86SX6 157 aa9.53□□□□□ -0.88
VPS13A-205ENST00000376636 DEFB121Q5J5C9 76 aa9.53□□□□□ -0.88
VPS13A-205ENST00000376636 MUC4Q99102 2169 aa9.53□□□□□ -0.88
VPS13A-205ENST00000376636 CELA3BP08861 270 aa9.52□□□□□ -0.88
VPS13A-205ENST00000376636 TNRC6BQ9UPQ9 1833 aaKnown RBP9.52□□□□□ -0.89
VPS13A-205ENST00000376636 VMO1Q7Z5L0 202 aa9.52□□□□□ -0.89
VPS13A-205ENST00000376636 SMIM10L1P0DMW3 83 aa9.52□□□□□ -0.89
VPS13A-205ENST00000376636 SMIM10Q96HG1 83 aa9.52□□□□□ -0.89
VPS13A-205ENST00000376636 FOXL2P58012 376 aa9.52□□□□□ -0.89
VPS13A-205ENST00000376636 CD24P25063 80 aa9.52□□□□□ -0.89
VPS13A-205ENST00000376636 BTCP35070 178 aa9.52□□□□□ -0.89
VPS13A-205ENST00000376636 DEFB130BP0DP73 79 aa9.52□□□□□ -0.89
VPS13A-205ENST00000376636 DEFB130AP0DP74 79 aa9.52□□□□□ -0.89
VPS13A-205ENST00000376636 Q8TAT8 98 aa9.52□□□□□ -0.89
VPS13A-205ENST00000376636 VSIRQ9H7M9 311 aa9.52□□□□□ -0.89
VPS13A-205ENST00000376636 NDUFB1O75438 58 aa9.51□□□□□ -0.89
VPS13A-205ENST00000376636 NDUFS6O75380 124 aaKnown RBP9.51□□□□□ -0.89
VPS13A-205ENST00000376636 PFN1P07737 140 aaKnown RBP9.51□□□□□ -0.89
VPS13A-205ENST00000376636 COX8AP10176 69 aa9.51□□□□□ -0.89
VPS13A-205ENST00000376636 KLHL30-AS1Q8NEE0 82 aa9.51□□□□□ -0.89
VPS13A-205ENST00000376636 CFHR4Q92496 578 aa9.51□□□□□ -0.89
VPS13A-205ENST00000376636 PLXNA3P51805 1871 aa9.51□□□□□ -0.89
VPS13A-205ENST00000376636 ZNF329Q86UD4 541 aa9.51□□□□□ -0.89
VPS13A-205ENST00000376636 PRSS46E5RG02 174 aa9.51□□□□□ -0.89
VPS13A-205ENST00000376636 Q86TA4 180 aa9.51□□□□□ -0.89
VPS13A-205ENST00000376636 PPP1R32Q7Z5V6 425 aa9.51□□□□□ -0.89
VPS13A-205ENST00000376636 WBP1Q96G27 269 aa9.51□□□□□ -0.89
VPS13A-205ENST00000376636 M0R1W7 72 aa9.51□□□□□ -0.89
VPS13A-205ENST00000376636 NHSL1Q5SYE7 1610 aa9.51□□□□□ -0.89
VPS13A-205ENST00000376636 SORL1Q92673 2214 aa9.51□□□□□ -0.89
VPS13A-205ENST00000376636 RNASE2P10153 161 aaKnown RBP9.51□□□□□ -0.89
VPS13A-205ENST00000376636 WFDC1Q9HC57 220 aa9.51□□□□□ -0.89
VPS13A-205ENST00000376636 Q8N8P6 123 aa9.51□□□□□ -0.89
VPS13A-205ENST00000376636 TEX48A0A1B0GUV7 120 aa9.5□□□□□ -0.89
VPS13A-205ENST00000376636 SIVA1O15304 175 aa9.5□□□□□ -0.89
VPS13A-205ENST00000376636 RFPL3SP0C7P2 107 aa9.5□□□□□ -0.89
VPS13A-205ENST00000376636 TICRRQ7Z2Z1 1910 aa9.5□□□□□ -0.89
VPS13A-205ENST00000376636 NDUFB8O95169 186 aa9.5□□□□□ -0.89
VPS13A-205ENST00000376636 C19orf48Q6RUI8 117 aa9.5□□□□□ -0.89
VPS13A-205ENST00000376636 IGHV1-3A0A0C4DH29 117 aa9.5□□□□□ -0.89
VPS13A-205ENST00000376636 IGLC2P0DOY2 106 aa9.5□□□□□ -0.89
VPS13A-205ENST00000376636 IGLC3P0DOY3 106 aa9.5□□□□□ -0.89
VPS13A-205ENST00000376636 NDPQ00604 133 aa9.5□□□□□ -0.89
VPS13A-205ENST00000376636 C2orf66Q6UXQ4 117 aa9.5□□□□□ -0.89
VPS13A-205ENST00000376636 DAD1P61803 113 aa9.5□□□□□ -0.89
VPS13A-205ENST00000376636 SMKR1H3BMG3 65 aa9.5□□□□□ -0.89
VPS13A-205ENST00000376636 IGHV1-8P0DP01 117 aa9.5□□□□□ -0.89
VPS13A-205ENST00000376636 SLC25A16P16260 332 aa9.5□□□□□ -0.89
VPS13A-205ENST00000376636 PRRC2AP48634 2157 aaKnown RBP9.5□□□□□ -0.89
VPS13A-205ENST00000376636 COL24A1Q17RW2 1714 aa9.5□□□□□ -0.89
VPS13A-205ENST00000376636 PCDH15Q96QU1 1955 aa9.5□□□□□ -0.89
VPS13A-205ENST00000376636 NDUFA12Q9UI09 145 aa9.5□□□□□ -0.89
VPS13A-205ENST00000376636 CFHR2P36980 270 aa9.5□□□□□ -0.89
VPS13A-205ENST00000376636 ANXA2RQ3ZCQ2 193 aa9.5□□□□□ -0.89
VPS13A-205ENST00000376636 RPP25LQ8N5L8 163 aaKnown RBP9.5□□□□□ -0.89
VPS13A-205ENST00000376636 C1QCP02747 245 aa9.49□□□□□ -0.89
VPS13A-205ENST00000376636 APOC4P55056 127 aa9.49□□□□□ -0.89
VPS13A-205ENST00000376636 C14orf132Q9NPU4 83 aa9.49□□□□□ -0.89
VPS13A-205ENST00000376636 HLA-DRB4P13762 266 aa9.49□□□□□ -0.89
VPS13A-205ENST00000376636 C5orf64Q2M2E5 130 aa9.49□□□□□ -0.89
VPS13A-205ENST00000376636 HLA-DRB4X5D2U9 266 aa9.49□□□□□ -0.89
VPS13A-205ENST00000376636 H3BMG7 143 aa9.49□□□□□ -0.89
VPS13A-205ENST00000376636 MALRD1Q5VYJ5 2156 aa9.49□□□□□ -0.89
VPS13A-205ENST00000376636 TINCRA0A1B0GVN0 87 aa9.49□□□□□ -0.89
VPS13A-205ENST00000376636 F5H768 121 aa9.49□□□□□ -0.89
VPS13A-205ENST00000376636 K7EMI3 77 aa9.49□□□□□ -0.89
VPS13A-205ENST00000376636 C15orf53Q8NAA6 179 aa9.49□□□□□ -0.89
VPS13A-205ENST00000376636 NRXN2Q9P2S2 1712 aa9.49□□□□□ -0.89
VPS13A-205ENST00000376636 A0A1B0GX51 115 aa9.48□□□□□ -0.89
VPS13A-205ENST00000376636 TMEM14EPQ6UXP3 125 aa9.48□□□□□ -0.89
VPS13A-205ENST00000376636 C20orf204Q6ZNR8 217 aa9.48□□□□□ -0.89
VPS13A-205ENST00000376636 POLR3KQ9Y2Y1 108 aaPredicted RBP9.48□□□□□ -0.89
VPS13A-205ENST00000376636 PIP4P2Q8N4L2 257 aa9.48□□□□□ -0.89
VPS13A-205ENST00000376636 MDS2Q8NDY4 140 aa9.48□□□□□ -0.89
VPS13A-205ENST00000376636 SIGLEC12Q96PQ1 595 aa9.48□□□□□ -0.89
VPS13A-205ENST00000376636 VWC2Q2TAL6 325 aa9.48□□□□□ -0.89
VPS13A-205ENST00000376636 DEFB104AQ8WTQ1 72 aa9.48□□□□□ -0.89
VPS13A-205ENST00000376636 ZSWIM8A7E2V4 1837 aa9.48□□□□□ -0.89
VPS13A-205ENST00000376636 RIF1Q5UIP0 2472 aaKnown RBP9.48□□□□□ -0.89
VPS13A-205ENST00000376636 PRSS29PA6NIE9 313 aa9.48□□□□□ -0.89
VPS13A-205ENST00000376636 CDKN1AP38936 164 aa9.48□□□□□ -0.89
VPS13A-205ENST00000376636 HGFACQ04756 655 aa9.48□□□□□ -0.89
VPS13A-205ENST00000376636 AGRNO00468 2067 aa9.48□□□□□ -0.89
VPS13A-205ENST00000376636 B5MCH6 92 aa9.48□□□□□ -0.89
VPS13A-205ENST00000376636 LYL1P12980 280 aa9.48□□□□□ -0.89
VPS13A-205ENST00000376636 UBE2BP63146 152 aa9.48□□□□□ -0.89
VPS13A-205ENST00000376636 TMEM219Q86XT9 240 aa9.48□□□□□ -0.89
VPS13A-205ENST00000376636 MRPL55Q7Z7F7 128 aaKnown RBP9.48□□□□□ -0.89
VPS13A-205ENST00000376636 C11orf44Q8N8P7 122 aa9.48□□□□□ -0.89
VPS13A-205ENST00000376636 F8VRH5 84 aa9.47□□□□□ -0.89
VPS13A-205ENST00000376636 ARMS2P0C7Q2 107 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms