RNA–Protein interactions for RNA: ENST00000375329.6

APOA1-205, Transcript of apolipoprotein A1, humanhuman

TSL 2 BASIC

Gene APOA1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-205ENST00000375329 ZNF503Q96F45 646 aa11.29□□□□□ -0.6
APOA1-205ENST00000375329 PAXXQ9BUH6 204 aa11.29□□□□□ -0.6
APOA1-205ENST00000375329 C1QTNF4Q9BXJ3 329 aa11.29□□□□□ -0.6
APOA1-205ENST00000375329 MAP1LC3BQ9GZQ8 125 aa11.29□□□□□ -0.6
APOA1-205ENST00000375329 OR51M1Q9H341 326 aa11.29□□□□□ -0.6
APOA1-205ENST00000375329 MRPS12O15235 138 aaKnown RBP11.28□□□□□ -0.6
APOA1-205ENST00000375329 UBE2L3P68036 154 aaKnown RBP11.28□□□□□ -0.6
APOA1-205ENST00000375329 SFT2D1Q8WV19 159 aa11.28□□□□□ -0.6
APOA1-205ENST00000375329 LINC00052Q96N35 136 aa11.28□□□□□ -0.6
APOA1-205ENST00000375329 TMEM14CQ9P0S9 112 aa11.28□□□□□ -0.6
APOA1-205ENST00000375329 H3BQ15 152 aa11.27□□□□□ -0.61
APOA1-205ENST00000375329 CXorf1O96002 111 aa11.27□□□□□ -0.61
APOA1-205ENST00000375329 GCHFRP30047 84 aa11.27□□□□□ -0.61
APOA1-205ENST00000375329 PQLC2Q6ZP29 291 aa11.27□□□□□ -0.61
APOA1-205ENST00000375329 BLNKQ8WV28 456 aa11.27□□□□□ -0.61
APOA1-205ENST00000375329 MBD3L1Q8WWY6 194 aa11.27□□□□□ -0.61
APOA1-205ENST00000375329 C16orf92Q96LL3 132 aa11.27□□□□□ -0.61
APOA1-205ENST00000375329 C17orf77Q96MU5 243 aa11.27□□□□□ -0.61
APOA1-205ENST00000375329 TMPRSS5Q9H3S3 457 aa11.27□□□□□ -0.61
APOA1-205ENST00000375329 H3BMM0 161 aa11.26□□□□□ -0.61
APOA1-205ENST00000375329 IGLC2P0DOY2 106 aa11.26□□□□□ -0.61
APOA1-205ENST00000375329 HLA-DRB4P13762 266 aa11.26□□□□□ -0.61
APOA1-205ENST00000375329 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.26□□□□□ -0.61
APOA1-205ENST00000375329 FOXI2Q6ZQN5 318 aa11.26□□□□□ -0.61
APOA1-205ENST00000375329 FXYD5Q96DB9 178 aa11.26□□□□□ -0.61
APOA1-205ENST00000375329 C11orf68Q9H3H3 251 aaKnown RBP11.26□□□□□ -0.61
APOA1-205ENST00000375329 ZNF586Q9NXT0 402 aa11.26□□□□□ -0.61
APOA1-205ENST00000375329 HLA-DRB4X5D2U9 266 aa11.26□□□□□ -0.61
APOA1-205ENST00000375329 A0A087X0K7 114 aa11.25□□□□□ -0.61
APOA1-205ENST00000375329 CXorf65A6NEN9 183 aa11.25□□□□□ -0.61
APOA1-205ENST00000375329 HIST1H1EP10412 219 aaKnown RBP11.25□□□□□ -0.61
APOA1-205ENST00000375329 BLOC1S1P78537 153 aa11.25□□□□□ -0.61
APOA1-205ENST00000375329 EBLN2Q6P2I7 272 aa11.25□□□□□ -0.61
APOA1-205ENST00000375329 CLUHP3Q96NS8 147 aa11.25□□□□□ -0.61
APOA1-205ENST00000375329 CSMD3Q7Z407 3707 aa11.25□□□□□ -0.61
APOA1-205ENST00000375329 NUPR2A6NF83 97 aa11.24□□□□□ -0.61
APOA1-205ENST00000375329 SLC17A3O00476 420 aa11.24□□□□□ -0.61
APOA1-205ENST00000375329 SOCS3O14543 225 aa11.24□□□□□ -0.61
APOA1-205ENST00000375329 NBEAP1P0C6P0 100 aa11.24□□□□□ -0.61
APOA1-205ENST00000375329 MIFP14174 115 aa11.24□□□□□ -0.61
APOA1-205ENST00000375329 ZNF767PQ75MW2 155 aa11.24□□□□□ -0.61
APOA1-205ENST00000375329 LRRC20Q8TCA0 184 aa11.24□□□□□ -0.61
APOA1-205ENST00000375329 SAT2Q96F10 170 aaPredicted RBP11.24□□□□□ -0.61
APOA1-205ENST00000375329 HRH4Q9H3N8 390 aa11.24□□□□□ -0.61
APOA1-205ENST00000375329 SAV1Q9H4B6 383 aaPredicted RBP11.24□□□□□ -0.61
APOA1-205ENST00000375329 TRBV19A0A075B6N1 114 aa11.23□□□□□ -0.61
APOA1-205ENST00000375329 LCE6AA0A183 80 aa11.23□□□□□ -0.61
APOA1-205ENST00000375329 TEX46H3BTG2 121 aa11.23□□□□□ -0.61
APOA1-205ENST00000375329 HBE1P02100 147 aa11.23□□□□□ -0.61
APOA1-205ENST00000375329 GIG44P09565 113 aaPredicted RBP11.23□□□□□ -0.61
APOA1-205ENST00000375329 CCL20P78556 96 aa11.23□□□□□ -0.61
APOA1-205ENST00000375329 IGFL4Q6B9Z1 124 aa11.23□□□□□ -0.61
APOA1-205ENST00000375329 TMEM167BQ9NRX6 74 aa11.23□□□□□ -0.61
APOA1-205ENST00000375329 KLK5Q9Y337 293 aaPredicted RBP11.23□□□□□ -0.61
APOA1-205ENST00000375329 HLA-DMBP28068 263 aa11.22□□□□□ -0.61
APOA1-205ENST00000375329 UBE2G2P60604 165 aa11.22□□□□□ -0.61
APOA1-205ENST00000375329 PMS2P11Q13670 270 aa11.22□□□□□ -0.61
APOA1-205ENST00000375329 GUK1Q16774 197 aa11.22□□□□□ -0.61
APOA1-205ENST00000375329 C11orf45Q8TAV5 145 aa11.22□□□□□ -0.61
APOA1-205ENST00000375329 TRAV1-1A0A0B4J248 108 aa11.21□□□□□ -0.61
APOA1-205ENST00000375329 NDUFB4O95168 129 aa11.21□□□□□ -0.61
APOA1-205ENST00000375329 NMBP08949 121 aa11.21□□□□□ -0.61
APOA1-205ENST00000375329 PRB4P10163 310 aaPredicted RBP11.21□□□□□ -0.61
APOA1-205ENST00000375329 RAB14P61106 215 aa11.21□□□□□ -0.61
APOA1-205ENST00000375329 RANP62826 216 aaKnown RBP11.21□□□□□ -0.61
APOA1-205ENST00000375329 RNF182Q8N6D2 247 aa11.21□□□□□ -0.61
APOA1-205ENST00000375329 OR4B1Q8NGF8 309 aa11.21□□□□□ -0.61
APOA1-205ENST00000375329 ZNF331Q9NQX6 463 aaPredicted RBP11.21□□□□□ -0.61
APOA1-205ENST00000375329 GNG13Q9P2W3 67 aa11.21□□□□□ -0.61
APOA1-205ENST00000375329 XCL2Q9UBD3 114 aa11.21□□□□□ -0.61
APOA1-205ENST00000375329 TRAV8-2A0A0B4J237 113 aa11.2□□□□□ -0.62
APOA1-205ENST00000375329 A0A0J9YX75 114 aa11.2□□□□□ -0.62
APOA1-205ENST00000375329 DUSP14O95147 198 aaKnown RBP11.2□□□□□ -0.62
APOA1-205ENST00000375329 PSG9Q00887 426 aa11.2□□□□□ -0.62
APOA1-205ENST00000375329 CEMP1Q6PRD7 247 aaPredicted RBP11.2□□□□□ -0.62
APOA1-205ENST00000375329 EXOC3-AS1Q8N2X6 119 aa11.2□□□□□ -0.62
APOA1-205ENST00000375329 CSNK1G2-AS1Q8NCQ2 148 aa11.2□□□□□ -0.62
APOA1-205ENST00000375329 SUN5Q8TC36 379 aa11.2□□□□□ -0.62
APOA1-205ENST00000375329 SLC50A1Q9BRV3 221 aa11.2□□□□□ -0.62
APOA1-205ENST00000375329 Q9H3A6 140 aa11.2□□□□□ -0.62
APOA1-205ENST00000375329 CLEC5AQ9NY25 188 aa11.2□□□□□ -0.62
APOA1-205ENST00000375329 PDE6HQ13956 83 aa11.19□□□□□ -0.62
APOA1-205ENST00000375329 GDF5OSQ5U4N7 250 aa11.19□□□□□ -0.62
APOA1-205ENST00000375329 Q8NAQ8 132 aa11.19□□□□□ -0.62
APOA1-205ENST00000375329 C20orf173Q96LM9 149 aa11.19□□□□□ -0.62
APOA1-205ENST00000375329 AAMDCQ9H7C9 122 aa11.19□□□□□ -0.62
APOA1-205ENST00000375329 YTHDF2Q9Y5A9 579 aaKnown RBP11.19□□□□□ -0.62
APOA1-205ENST00000375329 STARD9Q9P2P6 4700 aa11.18□□□□□ -0.62
APOA1-205ENST00000375329 SMIM9A6NGZ8 99 aa11.18□□□□□ -0.62
APOA1-205ENST00000375329 PAGE4O60829 102 aa11.18□□□□□ -0.62
APOA1-205ENST00000375329 ZNF253O75346 499 aa11.18□□□□□ -0.62
APOA1-205ENST00000375329 IGKV3-20P01619 116 aa11.18□□□□□ -0.62
APOA1-205ENST00000375329 AMBPP02760 352 aa11.18□□□□□ -0.62
APOA1-205ENST00000375329 ICAM4Q14773 271 aa11.18□□□□□ -0.62
APOA1-205ENST00000375329 LYPD6BQ8NI32 183 aa11.18□□□□□ -0.62
APOA1-205ENST00000375329 PHLDA1Q8WV24 401 aaPredicted RBP11.18□□□□□ -0.62
APOA1-205ENST00000375329 IGHV4-28A0A0C4DH34 117 aa11.17□□□□□ -0.62
APOA1-205ENST00000375329 PGPA6NDG6 321 aa11.17□□□□□ -0.62
APOA1-205ENST00000375329 FAM74A7A6NL05 159 aa11.17□□□□□ -0.62
APOA1-205ENST00000375329 RGS13O14921 159 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms