RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 IGKV1-17P01599 117 aa8.74□□□□□ -1.01
CCDC40-203ENST00000374877 S4R3C0 116 aa8.74□□□□□ -1.01
CCDC40-203ENST00000374877 KALRNO60229 2985 aa8.74□□□□□ -1.01
CCDC40-203ENST00000374877 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.74□□□□□ -1.01
CCDC40-203ENST00000374877 A0A1B0GW15 77 aa8.74□□□□□ -1.01
CCDC40-203ENST00000374877 TEX22C9J3V5 150 aa8.74□□□□□ -1.01
CCDC40-203ENST00000374877 TMEM155Q4W5P6 130 aa8.74□□□□□ -1.01
CCDC40-203ENST00000374877 TM4SF20Q53R12 229 aa8.74□□□□□ -1.01
CCDC40-203ENST00000374877 PRSS57Q6UWY2 283 aa8.74□□□□□ -1.01
CCDC40-203ENST00000374877 SIGLEC15Q6ZMC9 328 aa8.74□□□□□ -1.01
CCDC40-203ENST00000374877 C8orf31Q8N9H6 132 aa8.74□□□□□ -1.01
CCDC40-203ENST00000374877 LINC01560Q8TB33 94 aa8.74□□□□□ -1.01
CCDC40-203ENST00000374877 A0A0G2JLM5 398 aa8.74□□□□□ -1.01
CCDC40-203ENST00000374877 H3BRM9 83 aa8.74□□□□□ -1.01
CCDC40-203ENST00000374877 SMAD7O15105 426 aaKnown RBP8.74□□□□□ -1.01
CCDC40-203ENST00000374877 CNIH1O95406 144 aa8.74□□□□□ -1.01
CCDC40-203ENST00000374877 GRNP28799 593 aaKnown RBP8.74□□□□□ -1.01
CCDC40-203ENST00000374877 APOBEC3AP31941 199 aaPredicted RBP8.74□□□□□ -1.01
CCDC40-203ENST00000374877 Q6AWC8 147 aa8.74□□□□□ -1.01
CCDC40-203ENST00000374877 ORMDL3Q8N138 153 aa8.74□□□□□ -1.01
CCDC40-203ENST00000374877 ZNF414Q96IQ9 312 aa8.74□□□□□ -1.01
CCDC40-203ENST00000374877 ACACBO00763 2458 aa8.73□□□□□ -1.01
CCDC40-203ENST00000374877 SMKR1H3BMG3 65 aa8.73□□□□□ -1.01
CCDC40-203ENST00000374877 IL4P05112 153 aa8.73□□□□□ -1.01
CCDC40-203ENST00000374877 COX7A1P24310 79 aa8.73□□□□□ -1.01
CCDC40-203ENST00000374877 FCGR2BP31994 310 aaPredicted RBP8.73□□□□□ -1.01
CCDC40-203ENST00000374877 DLX6P56179 175 aa8.73□□□□□ -1.01
CCDC40-203ENST00000374877 ITPR1Q14643 2758 aa8.73□□□□□ -1.01
CCDC40-203ENST00000374877 ADGRG4Q8IZF6 3080 aa8.73□□□□□ -1.01
CCDC40-203ENST00000374877 SHANK2-AS3Q9BTD1 123 aa8.73□□□□□ -1.01
CCDC40-203ENST00000374877 TMEM189A5PLL7 270 aa8.73□□□□□ -1.01
CCDC40-203ENST00000374877 I3L2K1 104 aa8.73□□□□□ -1.01
CCDC40-203ENST00000374877 HSD52Q0P140 79 aa8.73□□□□□ -1.01
CCDC40-203ENST00000374877 LGALS9BQ3B8N2 356 aa8.73□□□□□ -1.01
CCDC40-203ENST00000374877 LGALS9CQ6DKI2 356 aa8.73□□□□□ -1.01
CCDC40-203ENST00000374877 UFSP1Q6NVU6 142 aa8.73□□□□□ -1.01
CCDC40-203ENST00000374877 PCP2Q8IVA1 136 aa8.73□□□□□ -1.01
CCDC40-203ENST00000374877 BOD1L2Q8IYS8 172 aa8.73□□□□□ -1.01
CCDC40-203ENST00000374877 OR2K2Q8NGT1 345 aa8.73□□□□□ -1.01
CCDC40-203ENST00000374877 ATRXP46100 2492 aa8.73□□□□□ -1.01
CCDC40-203ENST00000374877 HBDP02042 147 aa8.72□□□□□ -1.01
CCDC40-203ENST00000374877 OR1N2Q8NGR9 330 aa8.72□□□□□ -1.01
CCDC40-203ENST00000374877 ZZEF1O43149 2961 aa8.72□□□□□ -1.01
CCDC40-203ENST00000374877 IGHV1-3A0A0C4DH29 117 aa8.72□□□□□ -1.01
CCDC40-203ENST00000374877 TRBV6-1A0A0K0K1D8 114 aa8.72□□□□□ -1.01
CCDC40-203ENST00000374877 E7EQL1 145 aa8.72□□□□□ -1.01
CCDC40-203ENST00000374877 K7EP34 96 aa8.72□□□□□ -1.01
CCDC40-203ENST00000374877 CRYGBP07316 175 aa8.72□□□□□ -1.01
CCDC40-203ENST00000374877 FAM104BQ5XKR9 115 aa8.72□□□□□ -1.01
CCDC40-203ENST00000374877 GATD1Q8NB37 220 aa8.72□□□□□ -1.01
CCDC40-203ENST00000374877 IFI27L1Q96BM0 104 aa8.72□□□□□ -1.01
CCDC40-203ENST00000374877 DYNLRB1Q9NP97 96 aa8.72□□□□□ -1.01
CCDC40-203ENST00000374877 DPF1Q92782 380 aa8.72□□□□□ -1.01
CCDC40-203ENST00000374877 RNF125Q96EQ8 232 aa8.72□□□□□ -1.01
CCDC40-203ENST00000374877 C18orf15Q96N68 181 aa8.72□□□□□ -1.01
CCDC40-203ENST00000374877 BBC3Q96PG8 261 aaPredicted RBP8.72□□□□□ -1.01
CCDC40-203ENST00000374877 H3BRN7 92 aa8.71□□□□□ -1.01
CCDC40-203ENST00000374877 CKS2P33552 79 aa8.71□□□□□ -1.01
CCDC40-203ENST00000374877 MRPL51Q4U2R6 128 aaKnown RBP8.71□□□□□ -1.01
CCDC40-203ENST00000374877 OR9G4Q8NGQ1 327 aa8.71□□□□□ -1.01
CCDC40-203ENST00000374877 AAMDCQ9H7C9 122 aa8.71□□□□□ -1.01
CCDC40-203ENST00000374877 B9A039 149 aa8.71□□□□□ -1.02
CCDC40-203ENST00000374877 ZNF493Q6ZR52 646 aa8.71□□□□□ -1.02
CCDC40-203ENST00000374877 ZNF843Q8N446 348 aa8.71□□□□□ -1.02
CCDC40-203ENST00000374877 RPEQ96AT9 228 aa8.71□□□□□ -1.02
CCDC40-203ENST00000374877 SPCS1Q9Y6A9 102 aa8.71□□□□□ -1.02
CCDC40-203ENST00000374877 SH2D1AO60880 128 aa8.71□□□□□ -1.02
CCDC40-203ENST00000374877 NPYP01303 97 aa8.71□□□□□ -1.02
CCDC40-203ENST00000374877 TWIST1Q15672 202 aa8.7□□□□□ -1.02
CCDC40-203ENST00000374877 ZNF672Q499Z4 452 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-203ENST00000374877 KLF17Q5JT82 389 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-203ENST00000374877 BCL6BQ8N143 479 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-203ENST00000374877 ZNF491Q8N8L2 437 aa8.7□□□□□ -1.02
CCDC40-203ENST00000374877 DKK2Q9UBU2 259 aa8.7□□□□□ -1.02
CCDC40-203ENST00000374877 IGKV2-40A0A087WW87 121 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-203ENST00000374877 K7EIM0 57 aa8.7□□□□□ -1.02
CCDC40-203ENST00000374877 GOSR1O95249 250 aa8.7□□□□□ -1.02
CCDC40-203ENST00000374877 IGKV2D-40P01614 121 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-203ENST00000374877 PAX2Q02962 417 aa8.7□□□□□ -1.02
CCDC40-203ENST00000374877 OR4X2Q8NGF9 303 aa8.7□□□□□ -1.02
CCDC40-203ENST00000374877 TNFRSF13BO14836 293 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-203ENST00000374877 ADAMTSL5Q6ZMM2 481 aa8.7□□□□□ -1.02
CCDC40-203ENST00000374877 LYPD1Q8N2G4 141 aa8.7□□□□□ -1.02
CCDC40-203ENST00000374877 USP24Q9UPU5 2620 aa8.69□□□□□ -1.02
CCDC40-203ENST00000374877 BUB1B-PAK6H3BSN5 160 aa8.69□□□□□ -1.02
CCDC40-203ENST00000374877 GCSHP23434 173 aa8.69□□□□□ -1.02
CCDC40-203ENST00000374877 TMEM238C9JI98 176 aa8.69□□□□□ -1.02
CCDC40-203ENST00000374877 G3V4G9 280 aa8.69□□□□□ -1.02
CCDC40-203ENST00000374877 NDUFS7O75251 213 aa8.69□□□□□ -1.02
CCDC40-203ENST00000374877 Q8TAT8 98 aa8.69□□□□□ -1.02
CCDC40-203ENST00000374877 TACC2O95359 2948 aa8.69□□□□□ -1.02
CCDC40-203ENST00000374877 A0A1W2PPM0 123 aa8.68□□□□□ -1.02
CCDC40-203ENST00000374877 GNG7O60262 68 aa8.68□□□□□ -1.02
CCDC40-203ENST00000374877 IGLV1-47P01700 117 aa8.68□□□□□ -1.02
CCDC40-203ENST00000374877 U3KQK5 164 aa8.68□□□□□ -1.02
CCDC40-203ENST00000374877 WNK2Q9Y3S1 2297 aa8.68□□□□□ -1.02
CCDC40-203ENST00000374877 TTTY13Q9BZ97 58 aa8.68□□□□□ -1.02
CCDC40-203ENST00000374877 FABP2P12104 132 aa8.68□□□□□ -1.02
CCDC40-203ENST00000374877 IGFBPL1Q8WX77 278 aa8.68□□□□□ -1.02
CCDC40-203ENST00000374877 NBASA2RRP1 2371 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms