RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 NPC2P61916 151 aa8.24□□□□□ -1.09
CD28-202ENST00000374481 TCF20Q9UGU0 1960 aaKnown RBP8.24□□□□□ -1.09
CD28-202ENST00000374481 IGHV3OR16-13A0A075B7E8 117 aa8.24□□□□□ -1.09
CD28-202ENST00000374481 IGHV3-74A0A0B4J1X5 117 aa8.24□□□□□ -1.09
CD28-202ENST00000374481 EFNA4P52798 201 aa8.24□□□□□ -1.09
CD28-202ENST00000374481 FAM201AQ5SY85 155 aa8.24□□□□□ -1.09
CD28-202ENST00000374481 IGHV1OR15-9A0A0B4J2B8 117 aa8.23□□□□□ -1.09
CD28-202ENST00000374481 NPFFO15130 113 aa8.23□□□□□ -1.09
CD28-202ENST00000374481 CFC1BP0CG36 223 aa8.23□□□□□ -1.09
CD28-202ENST00000374481 CFC1P0CG37 223 aa8.23□□□□□ -1.09
CD28-202ENST00000374481 CCL8P80075 99 aa8.23□□□□□ -1.09
CD28-202ENST00000374481 PCOLCEQ15113 449 aa8.23□□□□□ -1.09
CD28-202ENST00000374481 FOXG1P55316 489 aaPredicted RBP8.23□□□□□ -1.09
CD28-202ENST00000374481 FAM214BQ7L5A3 538 aa8.23□□□□□ -1.09
CD28-202ENST00000374481 CARD19Q96LW7 228 aa8.23□□□□□ -1.09
CD28-202ENST00000374481 TM2D2Q9BX73 214 aa8.23□□□□□ -1.09
CD28-202ENST00000374481 RPUSD1Q9UJJ7 312 aaKnown RBP8.23□□□□□ -1.09
CD28-202ENST00000374481 SLC25A15Q9Y619 301 aa8.23□□□□□ -1.09
CD28-202ENST00000374481 A0A1B0GXF2 115 aa8.23□□□□□ -1.09
CD28-202ENST00000374481 TMEM133Q9H2Q1 129 aa8.23□□□□□ -1.09
CD28-202ENST00000374481 METRNQ9UJH8 293 aa8.23□□□□□ -1.09
CD28-202ENST00000374481 PVRIGQ6DKI7 326 aa8.22□□□□□ -1.09
CD28-202ENST00000374481 PLEKHB2Q96CS7 222 aa8.22□□□□□ -1.09
CD28-202ENST00000374481 IGHV3OR16-8A0A075B7F1 116 aa8.22□□□□□ -1.09
CD28-202ENST00000374481 IGHG4P01861 327 aa8.22□□□□□ -1.09
CD28-202ENST00000374481 CCL11P51671 97 aa8.22□□□□□ -1.09
CD28-202ENST00000374481 ATP5J2P56134 94 aa8.22□□□□□ -1.09
CD28-202ENST00000374481 CHCHD5Q9BSY4 110 aa8.22□□□□□ -1.09
CD28-202ENST00000374481 TTTY12Q9BZ98 90 aa8.22□□□□□ -1.09
CD28-202ENST00000374481 LAMA2P24043 3122 aaKnown RBP8.22□□□□□ -1.09
CD28-202ENST00000374481 CD3EP07766 207 aa8.22□□□□□ -1.09
CD28-202ENST00000374481 CCL4P13236 92 aa8.22□□□□□ -1.09
CD28-202ENST00000374481 ZNF415Q09FC8 603 aa8.22□□□□□ -1.09
CD28-202ENST00000374481 IL17RELQ6ZVW7 336 aa8.22□□□□□ -1.09
CD28-202ENST00000374481 LYPD1Q8N2G4 141 aa8.22□□□□□ -1.09
CD28-202ENST00000374481 DSCAML1Q8TD84 2053 aa8.22□□□□□ -1.09
CD28-202ENST00000374481 IGHV5-10-1A0A0J9YXX1 117 aa8.22□□□□□ -1.09
CD28-202ENST00000374481 PRR19A6NJB7 356 aa8.22□□□□□ -1.09
CD28-202ENST00000374481 IGLV2-8P01709 118 aa8.21□□□□□ -1.09
CD28-202ENST00000374481 HTN1P15515 57 aa8.21□□□□□ -1.09
CD28-202ENST00000374481 C2orf66Q6UXQ4 117 aa8.21□□□□□ -1.09
CD28-202ENST00000374481 FAM216BQ8N7L0 139 aa8.21□□□□□ -1.09
CD28-202ENST00000374481 TMEM75Q8N9X5 138 aa8.21□□□□□ -1.1
CD28-202ENST00000374481 PRR7Q8TB68 274 aa8.21□□□□□ -1.1
CD28-202ENST00000374481 METTL26Q96S19 204 aa8.21□□□□□ -1.1
CD28-202ENST00000374481 COL4A4P53420 1690 aaPredicted RBP8.21□□□□□ -1.1
CD28-202ENST00000374481 NCOA6Q14686 2063 aaPredicted RBP8.21□□□□□ -1.1
CD28-202ENST00000374481 DENND4CQ5VZ89 1909 aa8.21□□□□□ -1.1
CD28-202ENST00000374481 COLCA1Q6ZS62 124 aa8.21□□□□□ -1.1
CD28-202ENST00000374481 DEFB104AQ8WTQ1 72 aa8.21□□□□□ -1.1
CD28-202ENST00000374481 TM4SF5O14894 197 aa8.21□□□□□ -1.1
CD28-202ENST00000374481 INAFM2P0DMQ5 153 aa8.21□□□□□ -1.1
CD28-202ENST00000374481 SUMO2P61956 95 aaKnown RBP8.21□□□□□ -1.1
CD28-202ENST00000374481 SPTBN2O15020 2390 aa8.2□□□□□ -1.1
CD28-202ENST00000374481 A0A0U1RRA0 63 aa8.2□□□□□ -1.1
CD28-202ENST00000374481 IGKV1-16P04430 117 aa8.2□□□□□ -1.1
CD28-202ENST00000374481 ODF1Q14990 250 aa8.2□□□□□ -1.1
CD28-202ENST00000374481 CR1LQ2VPA4 569 aa8.2□□□□□ -1.1
CD28-202ENST00000374481 LINC01620Q4KN68 170 aa8.2□□□□□ -1.1
CD28-202ENST00000374481 C8orf49Q96NF6 230 aa8.2□□□□□ -1.1
CD28-202ENST00000374481 CREBBPQ92793 2442 aa8.2□□□□□ -1.1
CD28-202ENST00000374481 PLXNA4Q9HCM2 1894 aa8.2□□□□□ -1.1
CD28-202ENST00000374481 LINC01565O15544 149 aa8.2□□□□□ -1.1
CD28-202ENST00000374481 CEACAM4O75871 244 aa8.2□□□□□ -1.1
CD28-202ENST00000374481 LOXL1Q08397 574 aaPredicted RBP8.2□□□□□ -1.1
CD28-202ENST00000374481 UTF1Q5T230 341 aa8.2□□□□□ -1.1
CD28-202ENST00000374481 ZCCHC24Q8N2G6 241 aaKnown RBP8.2□□□□□ -1.1
CD28-202ENST00000374481 C11orf68Q9H3H3 251 aaKnown RBP8.2□□□□□ -1.1
CD28-202ENST00000374481 TICRRQ7Z2Z1 1910 aa8.2□□□□□ -1.1
CD28-202ENST00000374481 CD7P09564 240 aa8.2□□□□□ -1.1
CD28-202ENST00000374481 GATA3P23771 443 aa8.2□□□□□ -1.1
CD28-202ENST00000374481 LPAL2Q16609 132 aa8.2□□□□□ -1.1
CD28-202ENST00000374481 ECSCRQ19T08 205 aa8.2□□□□□ -1.1
CD28-202ENST00000374481 ZDBF2Q9HCK1 2354 aa8.2□□□□□ -1.1
CD28-202ENST00000374481 COX6A1P12074 109 aa8.19□□□□□ -1.1
CD28-202ENST00000374481 ASCL5Q7RTU5 278 aa8.19□□□□□ -1.1
CD28-202ENST00000374481 FAM90A1Q86YD7 464 aa8.19□□□□□ -1.1
CD28-202ENST00000374481 PLXNB3Q9ULL4 1909 aa8.19□□□□□ -1.1
CD28-202ENST00000374481 SYNJ2BPP57105 145 aa8.19□□□□□ -1.1
CD28-202ENST00000374481 TMEM167AQ8TBQ9 72 aa8.19□□□□□ -1.1
CD28-202ENST00000374481 C21orf62Q9NYP8 219 aa8.19□□□□□ -1.1
CD28-202ENST00000374481 SPTA1P02549 2419 aa8.19□□□□□ -1.1
CD28-202ENST00000374481 IGHV3-49A0A0A0MS15 119 aa8.19□□□□□ -1.1
CD28-202ENST00000374481 IGHV3-66A0A0C4DH42 116 aa8.19□□□□□ -1.1
CD28-202ENST00000374481 RHODO00212 210 aa8.19□□□□□ -1.1
CD28-202ENST00000374481 ZFP2Q6ZN57 461 aa8.19□□□□□ -1.1
CD28-202ENST00000374481 RS1O15537 224 aa8.19□□□□□ -1.1
CD28-202ENST00000374481 TCL1BO95988 128 aa8.19□□□□□ -1.1
CD28-202ENST00000374481 IGHV3-23P01764 117 aa8.19□□□□□ -1.1
CD28-202ENST00000374481 MBD6Q96DN6 1003 aa8.19□□□□□ -1.1
CD28-202ENST00000374481 COL4A3Q01955 1670 aa8.18□□□□□ -1.1
CD28-202ENST00000374481 PIEZO1Q92508 2521 aa8.18□□□□□ -1.1
CD28-202ENST00000374481 ACYP1P07311 99 aa8.18□□□□□ -1.1
CD28-202ENST00000374481 CRYGCP07315 174 aa8.18□□□□□ -1.1
CD28-202ENST00000374481 C19orf54Q5BKX5 351 aa8.18□□□□□ -1.1
CD28-202ENST00000374481 POLEQ07864 2286 aa8.18□□□□□ -1.1
CD28-202ENST00000374481 CD177Q8N6Q3 437 aa8.18□□□□□ -1.1
CD28-202ENST00000374481 ZNF106Q9H2Y7 1883 aaKnown RBP8.18□□□□□ -1.1
CD28-202ENST00000374481 CACNA1HO95180 2353 aa8.18□□□□□ -1.1
CD28-202ENST00000374481 IGLV3-12A0A075B6K2 115 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms