RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 BCL2L11O43521 198 aa11.68□□□□□ -0.54
HDHD3-202ENST00000374180 DUSP14O95147 198 aaKnown RBP11.68□□□□□ -0.54
HDHD3-202ENST00000374180 NBEAP1P0C6P0 100 aa11.68□□□□□ -0.54
HDHD3-202ENST00000374180 PDE6HQ13956 83 aa11.68□□□□□ -0.54
HDHD3-202ENST00000374180 RNF141Q8WVD5 230 aa11.68□□□□□ -0.54
HDHD3-202ENST00000374180 RPUSD4Q96CM3 377 aaKnown RBP11.68□□□□□ -0.54
HDHD3-202ENST00000374180 C1QTNF4Q9BXJ3 329 aa11.68□□□□□ -0.54
HDHD3-202ENST00000374180 SH3BGRL3Q9H299 93 aa11.68□□□□□ -0.54
HDHD3-202ENST00000374180 DNAH7Q8WXX0 4024 aa11.67□□□□□ -0.54
HDHD3-202ENST00000374180 ZNF253O75346 499 aa11.67□□□□□ -0.54
HDHD3-202ENST00000374180 MBP02144 154 aa11.67□□□□□ -0.54
HDHD3-202ENST00000374180 OR10J4P0C629 311 aa11.67□□□□□ -0.54
HDHD3-202ENST00000374180 ZNF705DP0CH99 300 aaPredicted RBP11.67□□□□□ -0.54
HDHD3-202ENST00000374180 ZNF705BP0CI00 300 aaPredicted RBP11.67□□□□□ -0.54
HDHD3-202ENST00000374180 PSG9Q00887 426 aa11.67□□□□□ -0.54
HDHD3-202ENST00000374180 KHDC3LQ587J8 217 aa11.67□□□□□ -0.54
HDHD3-202ENST00000374180 FAM122CQ6P4D5 195 aa11.67□□□□□ -0.54
HDHD3-202ENST00000374180 OR8A1Q8NGG7 326 aa11.67□□□□□ -0.54
HDHD3-202ENST00000374180 PHYHIPLQ96FC7 376 aa11.67□□□□□ -0.54
HDHD3-202ENST00000374180 RARRES2Q99969 163 aa11.67□□□□□ -0.54
HDHD3-202ENST00000374180 ZNF705FA8MVS1 300 aaPredicted RBP11.66□□□□□ -0.54
HDHD3-202ENST00000374180 NDUFB4O95168 129 aa11.66□□□□□ -0.54
HDHD3-202ENST00000374180 CNN1P51911 297 aaKnown RBP11.66□□□□□ -0.54
HDHD3-202ENST00000374180 FXYD7P58549 80 aa11.66□□□□□ -0.54
HDHD3-202ENST00000374180 EIF5AP63241 154 aaKnown RBP11.66□□□□□ -0.54
HDHD3-202ENST00000374180 OR11H2Q8NH07 326 aa11.66□□□□□ -0.54
HDHD3-202ENST00000374180 FXYD5Q96DB9 178 aa11.66□□□□□ -0.54
HDHD3-202ENST00000374180 CYTL1Q9NRR1 136 aa11.66□□□□□ -0.54
HDHD3-202ENST00000374180 XCL2Q9UBD3 114 aa11.66□□□□□ -0.54
HDHD3-202ENST00000374180 EIF3GO75821 320 aaKnown RBP eCLIP11.65□□□□□ -0.54
HDHD3-202ENST00000374180 NMBP08949 121 aa11.65□□□□□ -0.54
HDHD3-202ENST00000374180 PRB4P10163 310 aaPredicted RBP11.65□□□□□ -0.54
HDHD3-202ENST00000374180 HIST1H1AQ02539 215 aaPredicted RBP11.65□□□□□ -0.54
HDHD3-202ENST00000374180 ALKAL2Q6UX46 152 aa11.65□□□□□ -0.54
HDHD3-202ENST00000374180 RPP25LQ8N5L8 163 aaKnown RBP11.65□□□□□ -0.54
HDHD3-202ENST00000374180 AAMDCQ9H7C9 122 aa11.65□□□□□ -0.54
HDHD3-202ENST00000374180 EDA2RQ9HAV5 297 aa11.65□□□□□ -0.54
HDHD3-202ENST00000374180 KRBOX1C9JBD0 128 aa11.64□□□□□ -0.55
HDHD3-202ENST00000374180 CDC34P49427 236 aaPredicted RBP11.64□□□□□ -0.55
HDHD3-202ENST00000374180 UBE2L3P68036 154 aaKnown RBP11.64□□□□□ -0.55
HDHD3-202ENST00000374180 CSNK1G2-AS1Q8NCQ2 148 aa11.64□□□□□ -0.55
HDHD3-202ENST00000374180 SUN5Q8TC36 379 aa11.64□□□□□ -0.55
HDHD3-202ENST00000374180 ZNF503Q96F45 646 aa11.64□□□□□ -0.55
HDHD3-202ENST00000374180 SLC35B3Q9H1N7 401 aa11.64□□□□□ -0.55
HDHD3-202ENST00000374180 PRELID1Q9Y255 219 aa11.64□□□□□ -0.55
HDHD3-202ENST00000374180 A8MTW9 85 aa11.63□□□□□ -0.55
HDHD3-202ENST00000374180 PQLC2Q6ZP29 291 aa11.63□□□□□ -0.55
HDHD3-202ENST00000374180 EXOC3-AS1Q8N2X6 119 aa11.63□□□□□ -0.55
HDHD3-202ENST00000374180 EIF4E3Q8N5X7 224 aaKnown RBP11.63□□□□□ -0.55
HDHD3-202ENST00000374180 OR10J6PQ8NGY7 276 aa11.63□□□□□ -0.55
HDHD3-202ENST00000374180 ZNF471Q9BX82 626 aaPredicted RBP11.63□□□□□ -0.55
HDHD3-202ENST00000374180 PPP1R14DQ9NXH3 145 aa11.63□□□□□ -0.55
HDHD3-202ENST00000374180 PRAC2D3DTV9 90 aa11.63□□□□□ -0.55
HDHD3-202ENST00000374180 HMGB3O15347 200 aaKnown RBP11.63□□□□□ -0.55
HDHD3-202ENST00000374180 ICAM4Q14773 271 aa11.63□□□□□ -0.55
HDHD3-202ENST00000374180 AMTNQ6UX39 209 aa11.63□□□□□ -0.55
HDHD3-202ENST00000374180 RAB24Q969Q5 203 aa11.63□□□□□ -0.55
HDHD3-202ENST00000374180 MRPL53Q96EL3 112 aaKnown RBP11.63□□□□□ -0.55
HDHD3-202ENST00000374180 ACTR3CQ9C0K3 210 aaPredicted RBP11.63□□□□□ -0.55
HDHD3-202ENST00000374180 M0R3E3 92 aa11.62□□□□□ -0.55
HDHD3-202ENST00000374180 RANP62826 216 aaKnown RBP11.62□□□□□ -0.55
HDHD3-202ENST00000374180 AKR1C8PQ5T2L2 129 aa11.62□□□□□ -0.55
HDHD3-202ENST00000374180 STOML3Q8TAV4 291 aa11.62□□□□□ -0.55
HDHD3-202ENST00000374180 PCNPQ8WW12 178 aaKnown RBP11.62□□□□□ -0.55
HDHD3-202ENST00000374180 A0A0J9YWU9 116 aa11.61□□□□□ -0.55
HDHD3-202ENST00000374180 AMBPP02760 352 aa11.61□□□□□ -0.55
HDHD3-202ENST00000374180 STAG3L2P0CL84 134 aa11.61□□□□□ -0.55
HDHD3-202ENST00000374180 STAG3L3P0CL85 134 aa11.61□□□□□ -0.55
HDHD3-202ENST00000374180 TPT1P13693 172 aaKnown RBP11.61□□□□□ -0.55
HDHD3-202ENST00000374180 BAP18Q8IXM2 172 aa11.61□□□□□ -0.55
HDHD3-202ENST00000374180 LYPD1Q8N2G4 141 aa11.61□□□□□ -0.55
HDHD3-202ENST00000374180 ZNF705EA8MWA4 302 aaPredicted RBP11.6□□□□□ -0.55
HDHD3-202ENST00000374180 M0R2Z0 102 aa11.6□□□□□ -0.55
HDHD3-202ENST00000374180 ARL14EPLP0DKL9 152 aa11.6□□□□□ -0.55
HDHD3-202ENST00000374180 SPINK13Q1W4C9 94 aa11.6□□□□□ -0.55
HDHD3-202ENST00000374180 MUC7Q8TAX7 377 aa11.6□□□□□ -0.55
HDHD3-202ENST00000374180 EIF5AL1Q6IS14 154 aaKnown RBP11.59□□□□□ -0.55
HDHD3-202ENST00000374180 IGF2BP2-AS1Q96M15 143 aa11.59□□□□□ -0.55
HDHD3-202ENST00000374180 Q9H3A6 140 aa11.59□□□□□ -0.55
HDHD3-202ENST00000374180 GOLT1BQ9Y3E0 138 aa11.59□□□□□ -0.55
HDHD3-202ENST00000374180 IGHV3OR16-12A0A075B7B8 117 aa11.58□□□□□ -0.56
HDHD3-202ENST00000374180 CXorf1O96002 111 aa11.58□□□□□ -0.56
HDHD3-202ENST00000374180 MIFP14174 115 aa11.58□□□□□ -0.56
HDHD3-202ENST00000374180 CSN1S1P47710 185 aa11.58□□□□□ -0.56
HDHD3-202ENST00000374180 ZNF705AQ6ZN79 300 aaPredicted RBP11.58□□□□□ -0.56
HDHD3-202ENST00000374180 X6R8D5 127 aa11.58□□□□□ -0.56
HDHD3-202ENST00000374180 NPIPB6E9PJ23 425 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 SEC11BP0C7V7 166 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 GCHFRP30047 84 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 FAM74A1Q5RGS3 127 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 IL17DQ8TAD2 202 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 LINC00477Q96M19 166 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 TRAV12-2A0A075B6T6 113 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 IGHV4-28A0A0C4DH34 117 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 CTXND1A0A1B0GTU2 59 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 PGPA6NDG6 321 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 C3orf84H3BNL1 204 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 DEFB4AO15263 64 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 CRXO43186 299 aaPredicted RBP11.57□□□□□ -0.56
HDHD3-202ENST00000374180 INSP01308 110 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms