RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 DEFB135Q30KP9 77 aa13.45□□□□□ -0.26
PBX3-202ENST00000373482 STOML3Q8TAV4 291 aa13.45□□□□□ -0.26
PBX3-202ENST00000373482 MRPL53Q96EL3 112 aaKnown RBP13.45□□□□□ -0.26
PBX3-202ENST00000373482 C1QTNF4Q9BXJ3 329 aa13.45□□□□□ -0.26
PBX3-202ENST00000373482 DNAH9Q9NYC9 4486 aa13.45□□□□□ -0.26
PBX3-202ENST00000373482 CTXND1A0A1B0GTU2 59 aa13.44□□□□□ -0.26
PBX3-202ENST00000373482 CXorf1O96002 111 aa13.44□□□□□ -0.26
PBX3-202ENST00000373482 ARL14EPLP0DKL9 152 aa13.44□□□□□ -0.26
PBX3-202ENST00000373482 LYPD1Q8N2G4 141 aa13.44□□□□□ -0.26
PBX3-202ENST00000373482 OR8A1Q8NGG7 326 aa13.44□□□□□ -0.26
PBX3-202ENST00000373482 OR10J6PQ8NGY7 276 aa13.44□□□□□ -0.26
PBX3-202ENST00000373482 RETNQ9HD89 108 aa13.44□□□□□ -0.26
PBX3-202ENST00000373482 TP53TG1Q9Y2A0 90 aa13.44□□□□□ -0.26
PBX3-202ENST00000373482 ZNF705FA8MVS1 300 aaPredicted RBP13.43□□□□□ -0.26
PBX3-202ENST00000373482 UMAD1C9J7I0 102 aa13.43□□□□□ -0.26
PBX3-202ENST00000373482 SPRY2O43597 315 aa13.43□□□□□ -0.26
PBX3-202ENST00000373482 CNN1P51911 297 aaKnown RBP13.43□□□□□ -0.26
PBX3-202ENST00000373482 RANP62826 216 aaKnown RBP13.43□□□□□ -0.26
PBX3-202ENST00000373482 HIST1H1AQ02539 215 aaPredicted RBP13.43□□□□□ -0.26
PBX3-202ENST00000373482 ICAM4Q14773 271 aa13.43□□□□□ -0.26
PBX3-202ENST00000373482 EIF5AL1Q6IS14 154 aaKnown RBP13.43□□□□□ -0.26
PBX3-202ENST00000373482 SLC51BQ86UW2 128 aa13.43□□□□□ -0.26
PBX3-202ENST00000373482 EXOC3-AS1Q8N2X6 119 aa13.43□□□□□ -0.26
PBX3-202ENST00000373482 PHYHIPLQ96FC7 376 aa13.43□□□□□ -0.26
PBX3-202ENST00000373482 PPP1R14DQ9NXH3 145 aa13.43□□□□□ -0.26
PBX3-202ENST00000373482 ZNF705DP0CH99 300 aaPredicted RBP13.42□□□□□ -0.26
PBX3-202ENST00000373482 ZNF705BP0CI00 300 aaPredicted RBP13.42□□□□□ -0.26
PBX3-202ENST00000373482 FAM74A1Q5RGS3 127 aa13.42□□□□□ -0.26
PBX3-202ENST00000373482 C9orf62Q8N4C0 152 aa13.42□□□□□ -0.26
PBX3-202ENST00000373482 RNF183Q96D59 192 aa13.42□□□□□ -0.26
PBX3-202ENST00000373482 A8MTW9 85 aa13.41□□□□□ -0.26
PBX3-202ENST00000373482 GCHFRP30047 84 aa13.41□□□□□ -0.26
PBX3-202ENST00000373482 IQCF2Q8IXL9 164 aa13.41□□□□□ -0.26
PBX3-202ENST00000373482 TMED6Q8WW62 240 aa13.41□□□□□ -0.26
PBX3-202ENST00000373482 OVOL2Q9BRP0 275 aa13.41□□□□□ -0.26
PBX3-202ENST00000373482 Q9H3A6 140 aa13.41□□□□□ -0.26
PBX3-202ENST00000373482 TMEM167BQ9NRX6 74 aa13.41□□□□□ -0.26
PBX3-202ENST00000373482 M0R3E3 92 aa13.4□□□□□ -0.26
PBX3-202ENST00000373482 CSN1S1P47710 185 aa13.4□□□□□ -0.26
PBX3-202ENST00000373482 ZNF726P1Q15940 193 aa13.4□□□□□ -0.26
PBX3-202ENST00000373482 DPPA3Q6W0C5 159 aa13.4□□□□□ -0.26
PBX3-202ENST00000373482 SSX7Q7RTT5 188 aa13.4□□□□□ -0.26
PBX3-202ENST00000373482 XCL2Q9UBD3 114 aa13.4□□□□□ -0.26
PBX3-202ENST00000373482 PRAC2D3DTV9 90 aa13.39□□□□□ -0.27
PBX3-202ENST00000373482 AMBPP02760 352 aa13.39□□□□□ -0.27
PBX3-202ENST00000373482 FXYD7P58549 80 aa13.39□□□□□ -0.27
PBX3-202ENST00000373482 SLC35B3Q9H1N7 401 aa13.39□□□□□ -0.27
PBX3-202ENST00000373482 OTORQ9NRC9 128 aa13.39□□□□□ -0.27
PBX3-202ENST00000373482 NBEAL2Q6ZNJ1 2754 aa13.39□□□□□ -0.27
PBX3-202ENST00000373482 MAP1LC3B2A6NCE7 125 aa13.38□□□□□ -0.27
PBX3-202ENST00000373482 GIG44P09565 113 aaPredicted RBP13.38□□□□□ -0.27
PBX3-202ENST00000373482 PRB4P10163 310 aaPredicted RBP13.38□□□□□ -0.27
PBX3-202ENST00000373482 CMTM2Q8TAZ6 248 aa13.38□□□□□ -0.27
PBX3-202ENST00000373482 FAM213BQ8TBF2 198 aa13.38□□□□□ -0.27
PBX3-202ENST00000373482 SUN5Q8TC36 379 aa13.38□□□□□ -0.27
PBX3-202ENST00000373482 RXFP4Q8TDU9 374 aa13.38□□□□□ -0.27
PBX3-202ENST00000373482 RARRES2Q99969 163 aa13.38□□□□□ -0.27
PBX3-202ENST00000373482 MAP1LC3BQ9GZQ8 125 aa13.38□□□□□ -0.27
PBX3-202ENST00000373482 PGPA6NDG6 321 aa13.37□□□□□ -0.27
PBX3-202ENST00000373482 RAB5CP51148 216 aa13.37□□□□□ -0.27
PBX3-202ENST00000373482 NKX2-5P52952 324 aaPredicted RBP13.37□□□□□ -0.27
PBX3-202ENST00000373482 FGF8P55075 233 aaPredicted RBP13.37□□□□□ -0.27
PBX3-202ENST00000373482 AMTNQ6UX39 209 aa13.37□□□□□ -0.27
PBX3-202ENST00000373482 TENM3Q9P273 2699 aa13.36□□□□□ -0.27
PBX3-202ENST00000373482 NPIPB6E9PJ23 425 aa13.36□□□□□ -0.27
PBX3-202ENST00000373482 BOLA2-SMG1P6H3BVE0 249 aa13.36□□□□□ -0.27
PBX3-202ENST00000373482 FHITP49789 147 aa13.36□□□□□ -0.27
PBX3-202ENST00000373482 SPINK13Q1W4C9 94 aa13.36□□□□□ -0.27
PBX3-202ENST00000373482 OR11H2Q8NH07 326 aa13.36□□□□□ -0.27
PBX3-202ENST00000373482 PLA2G2EQ9NZK7 142 aa13.36□□□□□ -0.27
PBX3-202ENST00000373482 HUWE1Q7Z6Z7 4374 aaKnown RBP13.36□□□□□ -0.27
PBX3-202ENST00000373482 M0R2Z0 102 aa13.35□□□□□ -0.27
PBX3-202ENST00000373482 TSPOP30536 169 aa13.35□□□□□ -0.27
PBX3-202ENST00000373482 TMEM78Q5T7P6 136 aa13.35□□□□□ -0.27
PBX3-202ENST00000373482 CSNK1G2-AS1Q8NCQ2 148 aa13.35□□□□□ -0.27
PBX3-202ENST00000373482 LINC00477Q96M19 166 aa13.35□□□□□ -0.27
PBX3-202ENST00000373482 RBAKDNA6NC62 111 aa13.34□□□□□ -0.27
PBX3-202ENST00000373482 CDKN1BP46527 198 aa13.34□□□□□ -0.27
PBX3-202ENST00000373482 ARL6IP6Q8N6S5 226 aa13.34□□□□□ -0.27
PBX3-202ENST00000373482 SFT2D1Q8WV19 159 aa13.34□□□□□ -0.27
PBX3-202ENST00000373482 MBD3L1Q8WWY6 194 aa13.34□□□□□ -0.27
PBX3-202ENST00000373482 TMPRSS5Q9H3S3 457 aa13.34□□□□□ -0.27
PBX3-202ENST00000373482 RPH3ALQ9UNE2 315 aa13.34□□□□□ -0.27
PBX3-202ENST00000373482 IGKV2-40A0A087WW87 121 aaPredicted RBP13.33□□□□□ -0.28
PBX3-202ENST00000373482 A0A1W2PRE2 83 aa13.33□□□□□ -0.28
PBX3-202ENST00000373482 DIRC3C9JPN6 131 aa13.33□□□□□ -0.28
PBX3-202ENST00000373482 INSP01308 110 aa13.33□□□□□ -0.28
PBX3-202ENST00000373482 IGKV2D-40P01614 121 aaPredicted RBP13.33□□□□□ -0.28
PBX3-202ENST00000373482 SLC25A5P05141 298 aaKnown RBP13.33□□□□□ -0.28
PBX3-202ENST00000373482 H2AFB1P0C5Y9 115 aa13.33□□□□□ -0.28
PBX3-202ENST00000373482 LEPP41159 167 aa13.33□□□□□ -0.28
PBX3-202ENST00000373482 SULT1A2P50226 295 aa13.33□□□□□ -0.28
PBX3-202ENST00000373482 ERCC8Q13216 396 aa13.33□□□□□ -0.28
PBX3-202ENST00000373482 C9orf47Q6ZRZ4 202 aa13.33□□□□□ -0.28
PBX3-202ENST00000373482 IGF2BP2-AS1Q96M15 143 aa13.33□□□□□ -0.28
PBX3-202ENST00000373482 WWC2-AS2Q96NR7 200 aa13.33□□□□□ -0.28
PBX3-202ENST00000373482 ODF3Q96PU9 254 aa13.33□□□□□ -0.28
PBX3-202ENST00000373482 GOLT1BQ9Y3E0 138 aa13.33□□□□□ -0.28
PBX3-202ENST00000373482 SUMO1P63165 101 aaKnown RBP13.32□□□□□ -0.28
PBX3-202ENST00000373482 C5orf17Q8NAS9 161 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms