RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 MC5RP33032 325 aa10.84□□□□□ -0.67
USP49-201ENST00000373006 SEC11AP67812 179 aa10.84□□□□□ -0.67
USP49-201ENST00000373006 ADAMTSL5Q6ZMM2 481 aa10.84□□□□□ -0.67
USP49-201ENST00000373006 PCP2Q8IVA1 136 aa10.84□□□□□ -0.67
USP49-201ENST00000373006 C18orf15Q96N68 181 aa10.84□□□□□ -0.67
USP49-201ENST00000373006 ATP6V0BQ99437 205 aa10.84□□□□□ -0.67
USP49-201ENST00000373006 PSG8Q9UQ74 426 aa10.84□□□□□ -0.67
USP49-201ENST00000373006 RASL11BQ9BPW5 248 aa10.83□□□□□ -0.68
USP49-201ENST00000373006 CTSZQ9UBR2 303 aa10.83□□□□□ -0.68
USP49-201ENST00000373006 FTH1P19P0C7X4 201 aa10.83□□□□□ -0.68
USP49-201ENST00000373006 C17orf100A8MU93 164 aa10.83□□□□□ -0.68
USP49-201ENST00000373006 SMKR1H3BMG3 65 aa10.83□□□□□ -0.68
USP49-201ENST00000373006 WFDC2Q14508 124 aa10.83□□□□□ -0.68
USP49-201ENST00000373006 LYZL1Q6UWQ5 148 aa10.83□□□□□ -0.68
USP49-201ENST00000373006 ARPC1AQ92747 370 aa10.83□□□□□ -0.68
USP49-201ENST00000373006 FBXL15Q9H469 300 aa10.83□□□□□ -0.68
USP49-201ENST00000373006 IGFL2Q6UWQ7 119 aa10.82□□□□□ -0.68
USP49-201ENST00000373006 PRSS33Q8NF86 280 aa10.82□□□□□ -0.68
USP49-201ENST00000373006 NGBQ9NPG2 151 aa10.82□□□□□ -0.68
USP49-201ENST00000373006 SIGLEC9Q9Y336 463 aa10.82□□□□□ -0.68
USP49-201ENST00000373006 ASH1LQ9NR48 2969 aaKnown RBP10.82□□□□□ -0.68
USP49-201ENST00000373006 IGF2RP11717 2491 aa10.82□□□□□ -0.68
USP49-201ENST00000373006 TRBV19A0A075B6N1 114 aa10.82□□□□□ -0.68
USP49-201ENST00000373006 K7EM74 188 aa10.82□□□□□ -0.68
USP49-201ENST00000373006 SAMD5Q5TGI4 173 aa10.82□□□□□ -0.68
USP49-201ENST00000373006 UFSP1Q6NVU6 142 aa10.82□□□□□ -0.68
USP49-201ENST00000373006 PRELID3AQ96N28 172 aa10.82□□□□□ -0.68
USP49-201ENST00000373006 A1L4Q6 167 aa10.81□□□□□ -0.68
USP49-201ENST00000373006 GAGE12HA6NDE8 117 aa10.81□□□□□ -0.68
USP49-201ENST00000373006 LOXP28300 417 aaPredicted RBP10.81□□□□□ -0.68
USP49-201ENST00000373006 APOBEC3AP31941 199 aaPredicted RBP10.81□□□□□ -0.68
USP49-201ENST00000373006 ADIPOQQ15848 244 aa10.81□□□□□ -0.68
USP49-201ENST00000373006 BCL6BQ8N143 479 aaPredicted RBP10.81□□□□□ -0.68
USP49-201ENST00000373006 NHP2Q9NX24 153 aaKnown RBP10.81□□□□□ -0.68
USP49-201ENST00000373006 TMEM178BH3BS89 294 aa10.81□□□□□ -0.68
USP49-201ENST00000373006 IGKV1-17P01599 117 aa10.81□□□□□ -0.68
USP49-201ENST00000373006 IGHV1-8P0DP01 117 aa10.81□□□□□ -0.68
USP49-201ENST00000373006 ZNF292O60281 2723 aa10.81□□□□□ -0.68
USP49-201ENST00000373006 SPTAN1Q13813 2472 aaKnown RBP10.81□□□□□ -0.68
USP49-201ENST00000373006 HOXB4P17483 251 aaPredicted RBP10.81□□□□□ -0.68
USP49-201ENST00000373006 PPP1R27Q86WC6 154 aa10.81□□□□□ -0.68
USP49-201ENST00000373006 BOD1L2Q8IYS8 172 aa10.81□□□□□ -0.68
USP49-201ENST00000373006 SPTBN4Q9H254 2564 aa10.8□□□□□ -0.68
USP49-201ENST00000373006 COL6A6A6NMZ7 2263 aa10.8□□□□□ -0.68
USP49-201ENST00000373006 A0A1W2PPM0 123 aa10.8□□□□□ -0.68
USP49-201ENST00000373006 TEX22C9J3V5 150 aa10.8□□□□□ -0.68
USP49-201ENST00000373006 H3BRM9 83 aa10.8□□□□□ -0.68
USP49-201ENST00000373006 INSL3P51460 131 aa10.8□□□□□ -0.68
USP49-201ENST00000373006 SIGLEC15Q6ZMC9 328 aa10.8□□□□□ -0.68
USP49-201ENST00000373006 LINC00311Q8N616 119 aa10.8□□□□□ -0.68
USP49-201ENST00000373006 TMEM14CQ9P0S9 112 aa10.8□□□□□ -0.68
USP49-201ENST00000373006 INSIG2Q9Y5U4 225 aa10.8□□□□□ -0.68
USP49-201ENST00000373006 PLGLAQ15195 96 aa10.8□□□□□ -0.68
USP49-201ENST00000373006 PVRIGQ6DKI7 326 aa10.8□□□□□ -0.68
USP49-201ENST00000373006 SHISA2Q6UWI4 295 aa10.8□□□□□ -0.68
USP49-201ENST00000373006 ZNF48Q96MX3 618 aaPredicted RBP10.8□□□□□ -0.68
USP49-201ENST00000373006 H3BMG7 143 aa10.79□□□□□ -0.68
USP49-201ENST00000373006 SMAD7O15105 426 aaKnown RBP10.79□□□□□ -0.68
USP49-201ENST00000373006 ANXA2RQ3ZCQ2 193 aa10.79□□□□□ -0.68
USP49-201ENST00000373006 IGFBPL1Q8WX77 278 aa10.79□□□□□ -0.68
USP49-201ENST00000373006 DKK2Q9UBU2 259 aa10.79□□□□□ -0.68
USP49-201ENST00000373006 IL4P05112 153 aa10.79□□□□□ -0.68
USP49-201ENST00000373006 CT45A10P0DMU9 189 aa10.79□□□□□ -0.68
USP49-201ENST00000373006 KLF17Q5JT82 389 aaPredicted RBP10.79□□□□□ -0.68
USP49-201ENST00000373006 C1orf122Q6ZSJ8 110 aa10.79□□□□□ -0.68
USP49-201ENST00000373006 TMEM75Q8N9X5 138 aa10.79□□□□□ -0.68
USP49-201ENST00000373006 SCNM1Q9BWG6 230 aa10.79□□□□□ -0.68
USP49-201ENST00000373006 SS18L2Q9UHA2 77 aa10.79□□□□□ -0.68
USP49-201ENST00000373006 ARHGAP32A7KAX9 2087 aa10.79□□□□□ -0.68
USP49-201ENST00000373006 I3L2K1 104 aa10.79□□□□□ -0.68
USP49-201ENST00000373006 DLX6P56179 175 aa10.79□□□□□ -0.68
USP49-201ENST00000373006 ORMDL3Q8N138 153 aa10.79□□□□□ -0.68
USP49-201ENST00000373006 ZNF414Q96IQ9 312 aa10.79□□□□□ -0.68
USP49-201ENST00000373006 ATRXP46100 2492 aa10.78□□□□□ -0.68
USP49-201ENST00000373006 CNIH1O95406 144 aa10.78□□□□□ -0.68
USP49-201ENST00000373006 MRPL51Q4U2R6 128 aaKnown RBP10.78□□□□□ -0.68
USP49-201ENST00000373006 FAM104BQ5XKR9 115 aa10.78□□□□□ -0.68
USP49-201ENST00000373006 CCDC144NLQ6NUI1 221 aa10.78□□□□□ -0.68
USP49-201ENST00000373006 TMEM189A5PLL7 270 aa10.78□□□□□ -0.68
USP49-201ENST00000373006 CRYGBP07316 175 aa10.78□□□□□ -0.68
USP49-201ENST00000373006 COX7A1P24310 79 aa10.78□□□□□ -0.68
USP49-201ENST00000373006 BSPH1Q075Z2 132 aa10.78□□□□□ -0.68
USP49-201ENST00000373006 LGALS9BQ3B8N2 356 aa10.78□□□□□ -0.68
USP49-201ENST00000373006 TMEM155Q4W5P6 130 aa10.78□□□□□ -0.68
USP49-201ENST00000373006 LGALS9CQ6DKI2 356 aa10.78□□□□□ -0.68
USP49-201ENST00000373006 SHANK2-AS3Q9BTD1 123 aa10.78□□□□□ -0.68
USP49-201ENST00000373006 GEMIN7Q9H840 131 aaKnown RBP10.78□□□□□ -0.68
USP49-201ENST00000373006 IFI27L1Q96BM0 104 aa10.77□□□□□ -0.68
USP49-201ENST00000373006 IGHV1-3A0A0C4DH29 117 aa10.77□□□□□ -0.69
USP49-201ENST00000373006 NPYP01303 97 aa10.77□□□□□ -0.69
USP49-201ENST00000373006 HBDP02042 147 aa10.77□□□□□ -0.69
USP49-201ENST00000373006 CKS2P33552 79 aa10.77□□□□□ -0.69
USP49-201ENST00000373006 FXYD2P54710 66 aa10.77□□□□□ -0.69
USP49-201ENST00000373006 TWIST1Q15672 202 aa10.77□□□□□ -0.69
USP49-201ENST00000373006 C3orf36Q3SXR2 165 aa10.77□□□□□ -0.69
USP49-201ENST00000373006 ZNF493Q6ZR52 646 aa10.77□□□□□ -0.69
USP49-201ENST00000373006 NEGR1Q7Z3B1 354 aa10.77□□□□□ -0.69
USP49-201ENST00000373006 A0A1B0GW15 77 aa10.76□□□□□ -0.69
USP49-201ENST00000373006 IGFL4Q6B9Z1 124 aa10.76□□□□□ -0.69
USP49-201ENST00000373006 ZNF491Q8N8L2 437 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms