RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 LCN12Q6JVE5 192 aa18.26■□□□□ 0.51
SNX21-204ENST00000372542 MAPK1IP1LQ8NDC0 245 aa18.26■□□□□ 0.51
SNX21-204ENST00000372542 IGKV2-40A0A087WW87 121 aaPredicted RBP18.26■□□□□ 0.51
SNX21-204ENST00000372542 A0A1B0GUS0 222 aa18.26■□□□□ 0.51
SNX21-204ENST00000372542 IGKV2D-40P01614 121 aaPredicted RBP18.26■□□□□ 0.51
SNX21-204ENST00000372542 PAFAH1B2P68402 229 aa18.26■□□□□ 0.51
SNX21-204ENST00000372542 PRSS57Q6UWY2 283 aa18.26■□□□□ 0.51
SNX21-204ENST00000372542 Q6ZS46 218 aa18.25■□□□□ 0.51
SNX21-204ENST00000372542 MRPL53Q96EL3 112 aaKnown RBP18.25■□□□□ 0.51
SNX21-204ENST00000372542 PGLYRP4Q96LB8 373 aa18.25■□□□□ 0.51
SNX21-204ENST00000372542 CLEC5AQ9NY25 188 aa18.25■□□□□ 0.51
SNX21-204ENST00000372542 ANKRD17O75179 2603 aaKnown RBP18.24■□□□□ 0.51
SNX21-204ENST00000372542 RBAKDNA6NC62 111 aa18.24■□□□□ 0.51
SNX21-204ENST00000372542 APOHP02749 345 aaPredicted RBP18.24■□□□□ 0.51
SNX21-204ENST00000372542 SLAQ13239 276 aa18.24■□□□□ 0.51
SNX21-204ENST00000372542 KIAA1644Q3SXP7 199 aa18.24■□□□□ 0.51
SNX21-204ENST00000372542 FAM209BQ5JX69 171 aa18.24■□□□□ 0.51
SNX21-204ENST00000372542 GDF5OSQ5U4N7 250 aa18.24■□□□□ 0.51
SNX21-204ENST00000372542 Q71RC1 249 aaPredicted RBP18.24■□□□□ 0.51
SNX21-204ENST00000372542 C8orf49Q96NF6 230 aa18.24■□□□□ 0.51
SNX21-204ENST00000372542 PRR25Q96S07 402 aa18.24■□□□□ 0.51
SNX21-204ENST00000372542 GSN-AS1Q9NRJ2 163 aa18.24■□□□□ 0.51
SNX21-204ENST00000372542 IGHV3-66A0A0C4DH42 116 aa18.23■□□□□ 0.51
SNX21-204ENST00000372542 SERF1AO75920 110 aa18.23■□□□□ 0.51
SNX21-204ENST00000372542 SRIP30626 198 aa18.23■□□□□ 0.51
SNX21-204ENST00000372542 CRIP1P50238 77 aa18.23■□□□□ 0.51
SNX21-204ENST00000372542 Q6AWC8 147 aa18.23■□□□□ 0.51
SNX21-204ENST00000372542 CR1P17927 2039 aa18.23■□□□□ 0.51
SNX21-204ENST00000372542 ZNF207O43670 478 aaKnown RBP18.23■□□□□ 0.51
SNX21-204ENST00000372542 NUPR1O60356 82 aa18.23■□□□□ 0.51
SNX21-204ENST00000372542 CAMPP49913 170 aa18.23■□□□□ 0.51
SNX21-204ENST00000372542 OR4X2Q8NGF9 303 aa18.23■□□□□ 0.51
SNX21-204ENST00000372542 NDFIP1Q9BT67 221 aa18.23■□□□□ 0.51
SNX21-204ENST00000372542 KLK15Q9H2R5 256 aa18.23■□□□□ 0.51
SNX21-204ENST00000372542 TMEM89A2RUT3 159 aa18.22■□□□□ 0.51
SNX21-204ENST00000372542 A8MWP6 167 aa18.22■□□□□ 0.51
SNX21-204ENST00000372542 HLA-DMBP28068 263 aa18.22■□□□□ 0.51
SNX21-204ENST00000372542 LINC00310P59036 64 aa18.22■□□□□ 0.51
SNX21-204ENST00000372542 FAM162BQ5T6X4 162 aa18.22■□□□□ 0.51
SNX21-204ENST00000372542 LRRK2Q5S007 2527 aa18.22■□□□□ 0.51
SNX21-204ENST00000372542 IGFL4Q6B9Z1 124 aa18.21■□□□□ 0.51
SNX21-204ENST00000372542 GLMPQ8WWB7 406 aa18.21■□□□□ 0.51
SNX21-204ENST00000372542 HAX1O00165 279 aa18.21■□□□□ 0.51
SNX21-204ENST00000372542 TRBV12-3P01733 135 aa18.21■□□□□ 0.51
SNX21-204ENST00000372542 Q96MF0 132 aa18.21■□□□□ 0.51
SNX21-204ENST00000372542 ASCL2Q99929 193 aa18.21■□□□□ 0.51
SNX21-204ENST00000372542 VGLL1Q99990 258 aa18.21■□□□□ 0.51
SNX21-204ENST00000372542 IGHV3OR16-13A0A075B7E8 117 aa18.2■□□□□ 0.5
SNX21-204ENST00000372542 IGHV3-74A0A0B4J1X5 117 aa18.2■□□□□ 0.5
SNX21-204ENST00000372542 ZNF705FA8MVS1 300 aaPredicted RBP18.2■□□□□ 0.5
SNX21-204ENST00000372542 BMI1P35226 326 aa18.2■□□□□ 0.5
SNX21-204ENST00000372542 Q6YL49 198 aa18.2■□□□□ 0.5
SNX21-204ENST00000372542 VPREB3Q9UKI3 123 aa18.2■□□□□ 0.5
SNX21-204ENST00000372542 IGHV3-49A0A0A0MS15 119 aa18.19■□□□□ 0.5
SNX21-204ENST00000372542 A0A1B0GW15 77 aa18.19■□□□□ 0.5
SNX21-204ENST00000372542 A0A1W2PS18 150 aa18.19■□□□□ 0.5
SNX21-204ENST00000372542 IGHV3-11P01762 117 aa18.19■□□□□ 0.5
SNX21-204ENST00000372542 GZMBP10144 247 aa18.19■□□□□ 0.5
SNX21-204ENST00000372542 C8orf86Q6ZUL3 223 aa18.19■□□□□ 0.5
SNX21-204ENST00000372542 SH2D1AO60880 128 aa18.19■□□□□ 0.5
SNX21-204ENST00000372542 PRB4P10163 310 aaPredicted RBP18.19■□□□□ 0.5
SNX21-204ENST00000372542 KLF5Q13887 457 aaPredicted RBP18.19■□□□□ 0.5
SNX21-204ENST00000372542 CYB5R2Q6BCY4 276 aa18.19■□□□□ 0.5
SNX21-204ENST00000372542 NPFFR1Q9GZQ6 430 aa18.19■□□□□ 0.5
SNX21-204ENST00000372542 EPG5Q9HCE0 2579 aa18.19■□□□□ 0.5
SNX21-204ENST00000372542 PRRC2AP48634 2157 aaKnown RBP18.18■□□□□ 0.5
SNX21-204ENST00000372542 A0A1B0GUT8 65 aa18.18■□□□□ 0.5
SNX21-204ENST00000372542 TMEM189A5PLL7 270 aa18.18■□□□□ 0.5
SNX21-204ENST00000372542 RPS20P60866 119 aaKnown RBP18.18■□□□□ 0.5
SNX21-204ENST00000372542 RIGQ13278 110 aa18.18■□□□□ 0.5
SNX21-204ENST00000372542 CDPF1Q6NVV7 123 aa18.18■□□□□ 0.5
SNX21-204ENST00000372542 UNQ9165/PRO28630Q6UXU0 137 aa18.18■□□□□ 0.5
SNX21-204ENST00000372542 TRAV8-2A0A0B4J237 113 aa18.17■□□□□ 0.5
SNX21-204ENST00000372542 F2Z2F3 143 aa18.17■□□□□ 0.5
SNX21-204ENST00000372542 SRSF2Q01130 221 aaKnown RBP18.17■□□□□ 0.5
SNX21-204ENST00000372542 SSBP4Q9BWG4 385 aaPredicted RBP18.17■□□□□ 0.5
SNX21-204ENST00000372542 CSMD1Q96PZ7 3565 aa18.17■□□□□ 0.5
SNX21-204ENST00000372542 FBN2P35556 2912 aa18.17■□□□□ 0.5
SNX21-204ENST00000372542 UTP20O75691 2785 aaKnown RBP18.17■□□□□ 0.5
SNX21-204ENST00000372542 PSMB8P28062 276 aa18.16■□□□□ 0.5
SNX21-204ENST00000372542 RNF182Q8N6D2 247 aa18.16■□□□□ 0.5
SNX21-204ENST00000372542 BORCS7Q96B45 105 aa18.16■□□□□ 0.5
SNX21-204ENST00000372542 KCNS1Q96KK3 526 aa18.16■□□□□ 0.5
SNX21-204ENST00000372542 ALKBH7Q9BT30 221 aaPredicted RBP18.16■□□□□ 0.5
SNX21-204ENST00000372542 KRTAP1-3Q8IUG1 177 aa18.16■□□□□ 0.5
SNX21-204ENST00000372542 Q8TAT8 98 aa18.16■□□□□ 0.5
SNX21-204ENST00000372542 C18orf32Q8TCD1 76 aa18.16■□□□□ 0.5
SNX21-204ENST00000372542 SAMD10Q9BYL1 202 aa18.16■□□□□ 0.5
SNX21-204ENST00000372542 PRDM13Q9H4Q3 707 aa18.16■□□□□ 0.5
SNX21-204ENST00000372542 PEF1Q9UBV8 284 aaKnown RBP18.16■□□□□ 0.5
SNX21-204ENST00000372542 PRAC2D3DTV9 90 aa18.15■□□□□ 0.5
SNX21-204ENST00000372542 CRYBG3Q68DQ2 2970 aa18.15■□□□□ 0.5
SNX21-204ENST00000372542 GATD1Q8NB37 220 aa18.15■□□□□ 0.5
SNX21-204ENST00000372542 IQCJQ1A5X6 159 aa18.14■□□□□ 0.5
SNX21-204ENST00000372542 TMEM95Q3KNT9 176 aa18.14■□□□□ 0.5
SNX21-204ENST00000372542 C16orf92Q96LL3 132 aa18.14■□□□□ 0.5
SNX21-204ENST00000372542 VPS13CQ709C8 3753 aa18.14■□□□□ 0.49
SNX21-204ENST00000372542 CSPG4Q6UVK1 2322 aa18.14■□□□□ 0.49
SNX21-204ENST00000372542 SMAD7O15105 426 aaKnown RBP18.13■□□□□ 0.49
SNX21-204ENST00000372542 LCNL1Q6ZST4 164 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms