RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 FAM231BA6NCW3 169 aa13.8□□□□□ -0.2
CTSA-204ENST00000372484 RNF223E7ERA6 249 aa13.8□□□□□ -0.2
CTSA-204ENST00000372484 F2Z2F3 143 aa13.8□□□□□ -0.2
CTSA-204ENST00000372484 J3QLI3 93 aa13.8□□□□□ -0.2
CTSA-204ENST00000372484 ZNF207O43670 478 aaKnown RBP13.8□□□□□ -0.2
CTSA-204ENST00000372484 SRIP30626 198 aa13.8□□□□□ -0.2
CTSA-204ENST00000372484 RBPMS2Q6ZRY4 209 aaKnown RBP13.8□□□□□ -0.2
CTSA-204ENST00000372484 A0A1B0GXF2 115 aa13.79□□□□□ -0.2
CTSA-204ENST00000372484 APOHP02749 345 aaPredicted RBP13.79□□□□□ -0.2
CTSA-204ENST00000372484 CT45A10P0DMU9 189 aa13.79□□□□□ -0.2
CTSA-204ENST00000372484 GZMBP10144 247 aa13.79□□□□□ -0.2
CTSA-204ENST00000372484 ARL3P36405 182 aa13.79□□□□□ -0.2
CTSA-204ENST00000372484 LINC00310P59036 64 aa13.79□□□□□ -0.2
CTSA-204ENST00000372484 C1orf194Q5T5A4 169 aa13.79□□□□□ -0.2
CTSA-204ENST00000372484 C8orf49Q96NF6 230 aa13.79□□□□□ -0.2
CTSA-204ENST00000372484 A0A087X0K7 114 aa13.79□□□□□ -0.2
CTSA-204ENST00000372484 IGHV3-49A0A0A0MS15 119 aa13.79□□□□□ -0.2
CTSA-204ENST00000372484 H3BUA1 57 aa13.79□□□□□ -0.2
CTSA-204ENST00000372484 HLA-DMBP28068 263 aa13.79□□□□□ -0.2
CTSA-204ENST00000372484 HBBP68871 147 aa13.79□□□□□ -0.2
CTSA-204ENST00000372484 LOXL1Q08397 574 aaPredicted RBP13.79□□□□□ -0.2
CTSA-204ENST00000372484 DEFB112Q30KQ8 113 aa13.79□□□□□ -0.2
CTSA-204ENST00000372484 OR10J3Q5JRS4 329 aa13.79□□□□□ -0.2
CTSA-204ENST00000372484 DNLZQ5SXM8 178 aa13.79□□□□□ -0.2
CTSA-204ENST00000372484 C16orf54Q6UWD8 224 aa13.79□□□□□ -0.2
CTSA-204ENST00000372484 ZNF705FA8MVS1 300 aaPredicted RBP13.78□□□□□ -0.2
CTSA-204ENST00000372484 IGHG4P01861 327 aa13.78□□□□□ -0.2
CTSA-204ENST00000372484 CRIP1P50238 77 aa13.78□□□□□ -0.2
CTSA-204ENST00000372484 USMG5Q96IX5 58 aa13.78□□□□□ -0.2
CTSA-204ENST00000372484 SSBP4Q9BWG4 385 aaPredicted RBP13.78□□□□□ -0.2
CTSA-204ENST00000372484 BRI3O95415 125 aa13.78□□□□□ -0.2
CTSA-204ENST00000372484 PF4V1P10720 104 aa13.78□□□□□ -0.2
CTSA-204ENST00000372484 ESDP10768 282 aa13.78□□□□□ -0.2
CTSA-204ENST00000372484 LCN12Q6JVE5 192 aa13.78□□□□□ -0.2
CTSA-204ENST00000372484 IGHV4-59P01825 116 aa13.77□□□□□ -0.21
CTSA-204ENST00000372484 DEFB113Q30KQ7 82 aa13.77□□□□□ -0.21
CTSA-204ENST00000372484 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.77□□□□□ -0.21
CTSA-204ENST00000372484 OR5R1Q8NH85 324 aa13.77□□□□□ -0.21
CTSA-204ENST00000372484 KLK15Q9H2R5 256 aa13.77□□□□□ -0.21
CTSA-204ENST00000372484 BEX4Q9NWD9 120 aaPredicted RBP13.77□□□□□ -0.21
CTSA-204ENST00000372484 FBLL1A6NHQ2 334 aaKnown RBP13.76□□□□□ -0.21
CTSA-204ENST00000372484 TRBV12-3P01733 135 aa13.76□□□□□ -0.21
CTSA-204ENST00000372484 PAFAH1B2P68402 229 aa13.76□□□□□ -0.21
CTSA-204ENST00000372484 SAPCD1Q5SSQ6 148 aa13.76□□□□□ -0.21
CTSA-204ENST00000372484 VGLL1Q99990 258 aa13.76□□□□□ -0.21
CTSA-204ENST00000372484 CR1P17927 2039 aa13.76□□□□□ -0.21
CTSA-204ENST00000372484 IGHV3-11P01762 117 aa13.76□□□□□ -0.21
CTSA-204ENST00000372484 PRR25Q96S07 402 aa13.76□□□□□ -0.21
CTSA-204ENST00000372484 SLC50A1Q9BRV3 221 aa13.76□□□□□ -0.21
CTSA-204ENST00000372484 U3KQE9 123 aa13.76□□□□□ -0.21
CTSA-204ENST00000372484 A8MWP6 167 aa13.75□□□□□ -0.21
CTSA-204ENST00000372484 Q5PR19 223 aa13.75□□□□□ -0.21
CTSA-204ENST00000372484 RNF182Q8N6D2 247 aa13.75□□□□□ -0.21
CTSA-204ENST00000372484 Q8TAT8 98 aa13.75□□□□□ -0.21
CTSA-204ENST00000372484 PRDM13Q9H4Q3 707 aa13.75□□□□□ -0.21
CTSA-204ENST00000372484 IGHV4-31P0DP07 118 aa13.75□□□□□ -0.21
CTSA-204ENST00000372484 FOXA3P55318 350 aaPredicted RBP13.75□□□□□ -0.21
CTSA-204ENST00000372484 SAMD10Q9BYL1 202 aa13.75□□□□□ -0.21
CTSA-204ENST00000372484 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.74□□□□□ -0.21
CTSA-204ENST00000372484 IGLV1-40P01703 118 aa13.74□□□□□ -0.21
CTSA-204ENST00000372484 FAM162BQ5T6X4 162 aa13.74□□□□□ -0.21
CTSA-204ENST00000372484 LCNL1Q6ZST4 164 aa13.74□□□□□ -0.21
CTSA-204ENST00000372484 RCHY1Q96PM5 261 aa13.74□□□□□ -0.21
CTSA-204ENST00000372484 LINC00587B1AMM8 73 aa13.73□□□□□ -0.21
CTSA-204ENST00000372484 NDUFA4O00483 81 aa13.73□□□□□ -0.21
CTSA-204ENST00000372484 PRR31Q5SQ13 230 aa13.73□□□□□ -0.21
CTSA-204ENST00000372484 UNQ9165/PRO28630Q6UXU0 137 aa13.73□□□□□ -0.21
CTSA-204ENST00000372484 COX8CQ7Z4L0 72 aa13.73□□□□□ -0.21
CTSA-204ENST00000372484 LRRC75A-AS1Q8N1F1 130 aa13.73□□□□□ -0.21
CTSA-204ENST00000372484 OR4X2Q8NGF9 303 aa13.73□□□□□ -0.21
CTSA-204ENST00000372484 CREBBPQ92793 2442 aa13.73□□□□□ -0.21
CTSA-204ENST00000372484 APCP25054 2843 aa13.73□□□□□ -0.21
CTSA-204ENST00000372484 A0A0G2JLM5 398 aa13.73□□□□□ -0.21
CTSA-204ENST00000372484 C18orf32Q8TCD1 76 aa13.73□□□□□ -0.21
CTSA-204ENST00000372484 SH2D1AO60880 128 aa13.72□□□□□ -0.21
CTSA-204ENST00000372484 TMEM95Q3KNT9 176 aa13.72□□□□□ -0.21
CTSA-204ENST00000372484 C8orf86Q6ZUL3 223 aa13.72□□□□□ -0.21
CTSA-204ENST00000372484 A0A1B0GUT8 65 aa13.72□□□□□ -0.21
CTSA-204ENST00000372484 PRAC2D3DTV9 90 aa13.72□□□□□ -0.21
CTSA-204ENST00000372484 HAX1O00165 279 aa13.72□□□□□ -0.21
CTSA-204ENST00000372484 CFHR3Q02985 330 aa13.72□□□□□ -0.21
CTSA-204ENST00000372484 KCNS1Q96KK3 526 aa13.72□□□□□ -0.21
CTSA-204ENST00000372484 ALKBH7Q9BT30 221 aaPredicted RBP13.72□□□□□ -0.21
CTSA-204ENST00000372484 NDFIP1Q9BT67 221 aa13.72□□□□□ -0.21
CTSA-204ENST00000372484 CHD6Q8TD26 2715 aa13.71□□□□□ -0.21
CTSA-204ENST00000372484 TMEM189A5PLL7 270 aa13.71□□□□□ -0.21
CTSA-204ENST00000372484 ERCC8Q13216 396 aa13.71□□□□□ -0.21
CTSA-204ENST00000372484 IQCJQ1A5X6 159 aa13.71□□□□□ -0.21
CTSA-204ENST00000372484 SIGLECL1Q8N7X8 197 aa13.71□□□□□ -0.21
CTSA-204ENST00000372484 TPPP3Q9BW30 176 aa13.71□□□□□ -0.21
CTSA-204ENST00000372484 TEX15Q9BXT5 2789 aa13.71□□□□□ -0.21
CTSA-204ENST00000372484 MXRA5Q9NR99 2828 aa13.71□□□□□ -0.22
CTSA-204ENST00000372484 RBAKDNA6NC62 111 aa13.7□□□□□ -0.22
CTSA-204ENST00000372484 SCGB1D1O95968 90 aa13.7□□□□□ -0.22
CTSA-204ENST00000372484 ARMS2P0C7Q2 107 aa13.7□□□□□ -0.22
CTSA-204ENST00000372484 Q6AWC8 147 aa13.7□□□□□ -0.22
CTSA-204ENST00000372484 GLMPQ8WWB7 406 aa13.7□□□□□ -0.22
CTSA-204ENST00000372484 ZNF580Q9UK33 172 aa13.7□□□□□ -0.22
CTSA-204ENST00000372484 TMSB15BA0A087X1C1 80 aa13.7□□□□□ -0.22
CTSA-204ENST00000372484 TRAV8-2A0A0B4J237 113 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms