RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 RNF182Q8N6D2 247 aa11.82□□□□□ -0.52
TMEM53-204ENST00000372243 CMTM2Q8TAZ6 248 aa11.82□□□□□ -0.52
TMEM53-204ENST00000372243 NOTCH3Q9UM47 2321 aa11.81□□□□□ -0.52
TMEM53-204ENST00000372243 RAB19A4D1S5 217 aa11.81□□□□□ -0.52
TMEM53-204ENST00000372243 LINC00862A6NCI5 91 aa11.81□□□□□ -0.52
TMEM53-204ENST00000372243 M0R3E3 92 aa11.81□□□□□ -0.52
TMEM53-204ENST00000372243 SLC25A5P05141 298 aaKnown RBP11.81□□□□□ -0.52
TMEM53-204ENST00000372243 CSN1S1P47710 185 aa11.81□□□□□ -0.52
TMEM53-204ENST00000372243 TOR2AQ5JU69 321 aa11.81□□□□□ -0.52
TMEM53-204ENST00000372243 C20orf173Q96LM9 149 aa11.81□□□□□ -0.52
TMEM53-204ENST00000372243 LINC00052Q96N35 136 aa11.81□□□□□ -0.52
TMEM53-204ENST00000372243 RARRES2Q99969 163 aa11.81□□□□□ -0.52
TMEM53-204ENST00000372243 EIF5A2Q9GZV4 153 aaKnown RBP11.81□□□□□ -0.52
TMEM53-204ENST00000372243 SMDT1Q9H4I9 107 aa11.81□□□□□ -0.52
TMEM53-204ENST00000372243 MAP6D1Q9H9H5 199 aa11.81□□□□□ -0.52
TMEM53-204ENST00000372243 CD81P60033 236 aa11.8□□□□□ -0.52
TMEM53-204ENST00000372243 ODF3L2Q3SX64 289 aa11.8□□□□□ -0.52
TMEM53-204ENST00000372243 PSMG4Q5JS54 123 aa11.8□□□□□ -0.52
TMEM53-204ENST00000372243 HIST1H2BAQ96A08 127 aa11.8□□□□□ -0.52
TMEM53-204ENST00000372243 EPDR1Q9UM22 224 aa11.8□□□□□ -0.52
TMEM53-204ENST00000372243 SERTM2A0A1B0GWG4 89 aa11.79□□□□□ -0.52
TMEM53-204ENST00000372243 F6UZH7 168 aa11.79□□□□□ -0.52
TMEM53-204ENST00000372243 PDE6DO43924 150 aa11.79□□□□□ -0.52
TMEM53-204ENST00000372243 GTSCR1Q86UQ5 136 aa11.79□□□□□ -0.52
TMEM53-204ENST00000372243 ZNF738Q8NE65 137 aa11.79□□□□□ -0.52
TMEM53-204ENST00000372243 RPUSD4Q96CM3 377 aaKnown RBP11.79□□□□□ -0.52
TMEM53-204ENST00000372243 ZNF705FA8MVS1 300 aaPredicted RBP11.79□□□□□ -0.52
TMEM53-204ENST00000372243 OR11H12B2RN74 326 aa11.79□□□□□ -0.52
TMEM53-204ENST00000372243 DIRC3C9JPN6 131 aa11.79□□□□□ -0.52
TMEM53-204ENST00000372243 G3V4G9 280 aa11.79□□□□□ -0.52
TMEM53-204ENST00000372243 TCRAP04437 139 aa11.79□□□□□ -0.52
TMEM53-204ENST00000372243 DEFB131AP59861 70 aa11.79□□□□□ -0.52
TMEM53-204ENST00000372243 ATG101Q9BSB4 218 aa11.79□□□□□ -0.52
TMEM53-204ENST00000372243 DNHD1Q96M86 4753 aa11.78□□□□□ -0.52
TMEM53-204ENST00000372243 RBAKDNA6NC62 111 aa11.78□□□□□ -0.52
TMEM53-204ENST00000372243 CD7P09564 240 aa11.78□□□□□ -0.52
TMEM53-204ENST00000372243 PEA15Q15121 130 aa11.78□□□□□ -0.52
TMEM53-204ENST00000372243 FOXI2Q6ZQN5 318 aa11.78□□□□□ -0.52
TMEM53-204ENST00000372243 C11orf52Q96A22 123 aa11.78□□□□□ -0.52
TMEM53-204ENST00000372243 C19orf73Q9NVV2 129 aa11.78□□□□□ -0.52
TMEM53-204ENST00000372243 SORL1Q92673 2214 aa11.78□□□□□ -0.52
TMEM53-204ENST00000372243 TMEM250H0YL14 139 aa11.77□□□□□ -0.53
TMEM53-204ENST00000372243 PEX7O00628 323 aa11.77□□□□□ -0.53
TMEM53-204ENST00000372243 GNG5P63218 68 aa11.77□□□□□ -0.53
TMEM53-204ENST00000372243 EIF4E3Q8N5X7 224 aaKnown RBP11.77□□□□□ -0.53
TMEM53-204ENST00000372243 CYB561D1Q8N8Q1 229 aa11.77□□□□□ -0.53
TMEM53-204ENST00000372243 SAV1Q9H4B6 383 aaPredicted RBP11.77□□□□□ -0.53
TMEM53-204ENST00000372243 PRAC2D3DTV9 90 aa11.76□□□□□ -0.53
TMEM53-204ENST00000372243 K7EQM0 130 aa11.76□□□□□ -0.53
TMEM53-204ENST00000372243 EBLN2Q6P2I7 272 aa11.76□□□□□ -0.53
TMEM53-204ENST00000372243 UQCC3Q6UW78 93 aa11.76□□□□□ -0.53
TMEM53-204ENST00000372243 OR8A1Q8NGG7 326 aa11.76□□□□□ -0.53
TMEM53-204ENST00000372243 A0A0J9YX75 114 aa11.75□□□□□ -0.53
TMEM53-204ENST00000372243 SCO2A0A1W2PP80 73 aa11.75□□□□□ -0.53
TMEM53-204ENST00000372243 FBLL1A6NHQ2 334 aaKnown RBP11.75□□□□□ -0.53
TMEM53-204ENST00000372243 KRTAP10-11P60412 298 aa11.75□□□□□ -0.53
TMEM53-204ENST00000372243 SRSF3P84103 164 aaKnown RBP11.75□□□□□ -0.53
TMEM53-204ENST00000372243 KPRPQ5T749 579 aaPredicted RBP11.75□□□□□ -0.53
TMEM53-204ENST00000372243 GOLT1AQ6ZVE7 132 aa11.75□□□□□ -0.53
TMEM53-204ENST00000372243 COMMD7Q86VX2 200 aa11.75□□□□□ -0.53
TMEM53-204ENST00000372243 C2CD4CQ8TF44 421 aa11.75□□□□□ -0.53
TMEM53-204ENST00000372243 RPH3ALQ9UNE2 315 aa11.75□□□□□ -0.53
TMEM53-204ENST00000372243 KLF12Q9Y4X4 402 aa11.75□□□□□ -0.53
TMEM53-204ENST00000372243 SRP19P09132 144 aaKnown RBP11.75□□□□□ -0.53
TMEM53-204ENST00000372243 C9orf47Q6ZRZ4 202 aa11.75□□□□□ -0.53
TMEM53-204ENST00000372243 APRG1Q8IVJ8 170 aa11.75□□□□□ -0.53
TMEM53-204ENST00000372243 Q8N1Y9 231 aa11.75□□□□□ -0.53
TMEM53-204ENST00000372243 TMEM75Q8N9X5 138 aa11.75□□□□□ -0.53
TMEM53-204ENST00000372243 OR10J6PQ8NGY7 276 aa11.75□□□□□ -0.53
TMEM53-204ENST00000372243 IGKV2-40A0A087WW87 121 aaPredicted RBP11.74□□□□□ -0.53
TMEM53-204ENST00000372243 NPIPB6E9PJ23 425 aa11.74□□□□□ -0.53
TMEM53-204ENST00000372243 F6UB75 175 aa11.74□□□□□ -0.53
TMEM53-204ENST00000372243 DUSP14O95147 198 aaKnown RBP11.74□□□□□ -0.53
TMEM53-204ENST00000372243 IGKV2D-40P01614 121 aaPredicted RBP11.74□□□□□ -0.53
TMEM53-204ENST00000372243 S100A9P06702 114 aaKnown RBP11.74□□□□□ -0.53
TMEM53-204ENST00000372243 HLA-DRB4P13762 266 aa11.74□□□□□ -0.53
TMEM53-204ENST00000372243 NDUFA5Q16718 116 aa11.74□□□□□ -0.53
TMEM53-204ENST00000372243 GDF5OSQ5U4N7 250 aa11.74□□□□□ -0.53
TMEM53-204ENST00000372243 LINC00477Q96M19 166 aa11.74□□□□□ -0.53
TMEM53-204ENST00000372243 CLUHP3Q96NS8 147 aa11.74□□□□□ -0.53
TMEM53-204ENST00000372243 PPP1R14DQ9NXH3 145 aa11.74□□□□□ -0.53
TMEM53-204ENST00000372243 HLA-DRB4X5D2U9 266 aa11.74□□□□□ -0.53
TMEM53-204ENST00000372243 AKR1C3P42330 323 aa11.73□□□□□ -0.53
TMEM53-204ENST00000372243 CNN1P51911 297 aaKnown RBP11.73□□□□□ -0.53
TMEM53-204ENST00000372243 DEFB1P60022 68 aa11.73□□□□□ -0.53
TMEM53-204ENST00000372243 ZNF124Q15973 351 aa11.73□□□□□ -0.53
TMEM53-204ENST00000372243 FMC1Q96HJ9 113 aa11.73□□□□□ -0.53
TMEM53-204ENST00000372243 SLC35B3Q9H1N7 401 aa11.73□□□□□ -0.53
TMEM53-204ENST00000372243 TRBV6-1A0A0K0K1D8 114 aa11.72□□□□□ -0.53
TMEM53-204ENST00000372243 A8MTW9 85 aa11.72□□□□□ -0.53
TMEM53-204ENST00000372243 C9JQL5 133 aa11.72□□□□□ -0.53
TMEM53-204ENST00000372243 H3BMM0 161 aa11.72□□□□□ -0.53
TMEM53-204ENST00000372243 IGLV2-11P01706 119 aa11.72□□□□□ -0.53
TMEM53-204ENST00000372243 HIST1H1AQ02539 215 aaPredicted RBP11.72□□□□□ -0.53
TMEM53-204ENST00000372243 TMEM183BQ1AE95 376 aa11.72□□□□□ -0.53
TMEM53-204ENST00000372243 ACTL10Q5JWF8 245 aa11.72□□□□□ -0.53
TMEM53-204ENST00000372243 TMEM78Q5T7P6 136 aa11.72□□□□□ -0.53
TMEM53-204ENST00000372243 PRR25Q96S07 402 aa11.72□□□□□ -0.53
TMEM53-204ENST00000372243 VGLL1Q99990 258 aa11.72□□□□□ -0.53
TMEM53-204ENST00000372243 AGPAT4-IT1Q9H0P7 198 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms