RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 Q86TA4 180 aa9.98□□□□□ -0.81
LDB3-203ENST00000372056 OR8I2Q8N0Y5 310 aa9.98□□□□□ -0.81
LDB3-203ENST00000372056 SMR3AQ99954 134 aa9.98□□□□□ -0.81
LDB3-203ENST00000372056 SERTAD4Q9NUC0 356 aa9.98□□□□□ -0.81
LDB3-203ENST00000372056 TRAV8-1A0A0A6YYK1 113 aa9.98□□□□□ -0.81
LDB3-203ENST00000372056 TRBV6-1A0A0K0K1D8 114 aa9.98□□□□□ -0.81
LDB3-203ENST00000372056 SMIM27A0A1W2PRY6 76 aa9.98□□□□□ -0.81
LDB3-203ENST00000372056 LBHQ53QV2 105 aaPredicted RBP9.98□□□□□ -0.81
LDB3-203ENST00000372056 Q6ZSV7 163 aa9.98□□□□□ -0.81
LDB3-203ENST00000372056 MYOZ3Q8TDC0 251 aa9.98□□□□□ -0.81
LDB3-203ENST00000372056 HIST1H2BLQ99880 126 aa9.98□□□□□ -0.81
LDB3-203ENST00000372056 SMAD5-AS1Q9Y6J3 95 aa9.98□□□□□ -0.81
LDB3-203ENST00000372056 MYO9AB2RTY4 2548 aa9.97□□□□□ -0.81
LDB3-203ENST00000372056 ZNF705GA8MUZ8 300 aaPredicted RBP9.97□□□□□ -0.81
LDB3-203ENST00000372056 TSTD3H0UI37 97 aa9.97□□□□□ -0.81
LDB3-203ENST00000372056 NDUFA4O00483 81 aa9.97□□□□□ -0.81
LDB3-203ENST00000372056 BUB3O43684 328 aa9.97□□□□□ -0.81
LDB3-203ENST00000372056 ARL3P36405 182 aa9.97□□□□□ -0.81
LDB3-203ENST00000372056 COA6Q5JTJ3 125 aaKnown RBP9.97□□□□□ -0.81
LDB3-203ENST00000372056 PRR27Q6MZM9 219 aa9.97□□□□□ -0.81
LDB3-203ENST00000372056 NUDT10Q8NFP7 164 aa9.97□□□□□ -0.81
LDB3-203ENST00000372056 NUDT11Q96G61 164 aa9.97□□□□□ -0.81
LDB3-203ENST00000372056 C2orf88Q9BSF0 95 aa9.97□□□□□ -0.81
LDB3-203ENST00000372056 AAMDCQ9H7C9 122 aa9.97□□□□□ -0.81
LDB3-203ENST00000372056 ESM1Q9NQ30 184 aa9.97□□□□□ -0.81
LDB3-203ENST00000372056 PEF1Q9UBV8 284 aaKnown RBP9.97□□□□□ -0.81
LDB3-203ENST00000372056 HIVEP2P31629 2446 aa9.96□□□□□ -0.81
LDB3-203ENST00000372056 M0R3E3 92 aa9.96□□□□□ -0.81
LDB3-203ENST00000372056 ZNF253O75346 499 aa9.96□□□□□ -0.81
LDB3-203ENST00000372056 FABP4P15090 132 aa9.96□□□□□ -0.81
LDB3-203ENST00000372056 BMI1P35226 326 aa9.96□□□□□ -0.81
LDB3-203ENST00000372056 PSG9Q00887 426 aa9.96□□□□□ -0.81
LDB3-203ENST00000372056 JOSD1Q15040 202 aaPredicted RBP9.96□□□□□ -0.81
LDB3-203ENST00000372056 FAM106AQ4KMX7 169 aa9.96□□□□□ -0.81
LDB3-203ENST00000372056 KLHDC1Q8N7A1 406 aa9.96□□□□□ -0.81
LDB3-203ENST00000372056 TMEM75Q8N9X5 138 aa9.96□□□□□ -0.81
LDB3-203ENST00000372056 PACRGQ96M98 296 aaPredicted RBP9.96□□□□□ -0.81
LDB3-203ENST00000372056 A0A1B0GV90 55 aa9.96□□□□□ -0.82
LDB3-203ENST00000372056 DIRC3C9JPN6 131 aa9.96□□□□□ -0.82
LDB3-203ENST00000372056 INAFM1C9JVW0 142 aa9.96□□□□□ -0.82
LDB3-203ENST00000372056 CA1P00915 261 aaPredicted RBP9.96□□□□□ -0.82
LDB3-203ENST00000372056 C1orf194Q5T5A4 169 aa9.96□□□□□ -0.82
LDB3-203ENST00000372056 TMEM183AQ8IXX5 376 aa9.96□□□□□ -0.82
LDB3-203ENST00000372056 KLK15Q9H2R5 256 aa9.96□□□□□ -0.82
LDB3-203ENST00000372056 TRAPPC1Q9Y5R8 145 aa9.96□□□□□ -0.82
LDB3-203ENST00000372056 SETXQ7Z333 2677 aaKnown RBP9.95□□□□□ -0.82
LDB3-203ENST00000372056 TLN2Q9Y4G6 2542 aa9.95□□□□□ -0.82
LDB3-203ENST00000372056 K7EQM0 130 aa9.95□□□□□ -0.82
LDB3-203ENST00000372056 TCL1AP56279 114 aa9.95□□□□□ -0.82
LDB3-203ENST00000372056 PRNTQ86SH4 94 aa9.95□□□□□ -0.82
LDB3-203ENST00000372056 GPHB5Q86YW7 130 aa9.95□□□□□ -0.82
LDB3-203ENST00000372056 ARL6IP6Q8N6S5 226 aa9.95□□□□□ -0.82
LDB3-203ENST00000372056 GRAMD2BQ96HH9 432 aa9.95□□□□□ -0.82
LDB3-203ENST00000372056 DUX5Q96PT3 197 aa9.95□□□□□ -0.82
LDB3-203ENST00000372056 METTL26Q96S19 204 aa9.95□□□□□ -0.82
LDB3-203ENST00000372056 ZNF492Q9P255 531 aa9.95□□□□□ -0.82
LDB3-203ENST00000372056 A0A087X0K7 114 aa9.94□□□□□ -0.82
LDB3-203ENST00000372056 A0A1W2PS18 150 aa9.94□□□□□ -0.82
LDB3-203ENST00000372056 C19orf71A6NCJ1 209 aa9.94□□□□□ -0.82
LDB3-203ENST00000372056 K7EMT4 169 aa9.94□□□□□ -0.82
LDB3-203ENST00000372056 TRBV12-3P01733 135 aa9.94□□□□□ -0.82
LDB3-203ENST00000372056 LGALS1P09382 135 aaKnown RBP9.94□□□□□ -0.82
LDB3-203ENST00000372056 PSG3Q16557 428 aa9.94□□□□□ -0.82
LDB3-203ENST00000372056 PDZD11Q5EBL8 140 aa9.94□□□□□ -0.82
LDB3-203ENST00000372056 LINC00322Q6ZN03 302 aaPredicted RBP9.94□□□□□ -0.82
LDB3-203ENST00000372056 U3KQE9 123 aa9.94□□□□□ -0.82
LDB3-203ENST00000372056 SERTM2A0A1B0GWG4 89 aa9.93□□□□□ -0.82
LDB3-203ENST00000372056 APOHP02749 345 aaPredicted RBP9.93□□□□□ -0.82
LDB3-203ENST00000372056 FRMD6-AS1P0C7T7 363 aa9.93□□□□□ -0.82
LDB3-203ENST00000372056 CBLN1P23435 193 aa9.93□□□□□ -0.82
LDB3-203ENST00000372056 TMEM95Q3KNT9 176 aa9.93□□□□□ -0.82
LDB3-203ENST00000372056 Q71RC1 249 aaPredicted RBP9.93□□□□□ -0.82
LDB3-203ENST00000372056 ZNF331Q9NQX6 463 aaPredicted RBP9.93□□□□□ -0.82
LDB3-203ENST00000372056 PSG8Q9UQ74 426 aa9.93□□□□□ -0.82
LDB3-203ENST00000372056 ZFP30Q9Y2G7 519 aa9.93□□□□□ -0.82
LDB3-203ENST00000372056 CSN1S1P47710 185 aa9.93□□□□□ -0.82
LDB3-203ENST00000372056 RPL19P84098 196 aaKnown RBP9.93□□□□□ -0.82
LDB3-203ENST00000372056 CT83Q5H943 113 aa9.93□□□□□ -0.82
LDB3-203ENST00000372056 TSKUQ8WUA8 353 aa9.93□□□□□ -0.82
LDB3-203ENST00000372056 PRO1933Q9H354 126 aa9.93□□□□□ -0.82
LDB3-203ENST00000372056 RPP21Q9H633 154 aaKnown RBP9.93□□□□□ -0.82
LDB3-203ENST00000372056 IGHV3-66A0A0C4DH42 116 aa9.92□□□□□ -0.82
LDB3-203ENST00000372056 XKRY2A2RUG3 117 aa9.92□□□□□ -0.82
LDB3-203ENST00000372056 IZUMO1RA6ND01 250 aa9.92□□□□□ -0.82
LDB3-203ENST00000372056 A8MWP6 167 aa9.92□□□□□ -0.82
LDB3-203ENST00000372056 ZNF207O43670 478 aaKnown RBP9.92□□□□□ -0.82
LDB3-203ENST00000372056 IGHV3-11P01762 117 aa9.92□□□□□ -0.82
LDB3-203ENST00000372056 AMBPP02760 352 aa9.92□□□□□ -0.82
LDB3-203ENST00000372056 GZMBP10144 247 aa9.92□□□□□ -0.82
LDB3-203ENST00000372056 LCNL1Q6ZST4 164 aa9.92□□□□□ -0.82
LDB3-203ENST00000372056 GNB1LQ9BYB4 327 aa9.92□□□□□ -0.82
LDB3-203ENST00000372056 UFC1Q9Y3C8 167 aa9.92□□□□□ -0.82
LDB3-203ENST00000372056 NOTCH2Q04721 2471 aa9.92□□□□□ -0.82
LDB3-203ENST00000372056 IGHV3OR16-13A0A075B7E8 117 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 IGHV3-74A0A0B4J1X5 117 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 ZNF785A8K8V0 405 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 NPIPB6E9PJ23 425 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 SPINK4O60575 86 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 P01737 135 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 PRB4P10163 310 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms