RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 H3BRM9 83 aa10.06□□□□□ -0.8
GPC3-201ENST00000370818 LEPROTL1O95214 131 aa10.06□□□□□ -0.8
GPC3-201ENST00000370818 ARPC1AQ92747 370 aa10.06□□□□□ -0.8
GPC3-201ENST00000370818 MCRIP2Q9BUT9 160 aaKnown RBP10.06□□□□□ -0.8
GPC3-201ENST00000370818 USP9XQ93008 2570 aaPredicted RBP10.06□□□□□ -0.8
GPC3-201ENST00000370818 USP24Q9UPU5 2620 aa10.06□□□□□ -0.8
GPC3-201ENST00000370818 IGHV1-24A0A0C4DH33 117 aa10.06□□□□□ -0.8
GPC3-201ENST00000370818 ZNF329Q86UD4 541 aa10.06□□□□□ -0.8
GPC3-201ENST00000370818 FANCD2OSQ96PS1 177 aa10.06□□□□□ -0.8
GPC3-201ENST00000370818 CCL19Q99731 98 aa10.06□□□□□ -0.8
GPC3-201ENST00000370818 NPFFR1Q9GZQ6 430 aa10.06□□□□□ -0.8
GPC3-201ENST00000370818 H3BUT2 72 aa10.05□□□□□ -0.8
GPC3-201ENST00000370818 SMIM17P0DL12 118 aa10.05□□□□□ -0.8
GPC3-201ENST00000370818 COX8AP10176 69 aa10.05□□□□□ -0.8
GPC3-201ENST00000370818 MYCNOSP40205 109 aa10.05□□□□□ -0.8
GPC3-201ENST00000370818 PSG3Q16557 428 aa10.05□□□□□ -0.8
GPC3-201ENST00000370818 PIP4P2Q8N4L2 257 aa10.05□□□□□ -0.8
GPC3-201ENST00000370818 STXBP6Q8NFX7 210 aa10.05□□□□□ -0.8
GPC3-201ENST00000370818 OR2K2Q8NGT1 345 aa10.05□□□□□ -0.8
GPC3-201ENST00000370818 LINC00479Q96M42 142 aa10.05□□□□□ -0.8
GPC3-201ENST00000370818 AP1S3Q96PC3 154 aa10.05□□□□□ -0.8
GPC3-201ENST00000370818 RASL11BQ9BPW5 248 aa10.05□□□□□ -0.8
GPC3-201ENST00000370818 IGLV11-55A0A075B6I3 123 aa10.05□□□□□ -0.8
GPC3-201ENST00000370818 NPIPB5A8MRT5 1133 aa10.05□□□□□ -0.8
GPC3-201ENST00000370818 NHLRC2Q8NBF2 726 aa10.05□□□□□ -0.8
GPC3-201ENST00000370818 IGHV4-61A0A0C4DH41 118 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 SNAI2O43623 268 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 PRB1P04280 392 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 EGR2P11161 476 aaPredicted RBP10.04□□□□□ -0.8
GPC3-201ENST00000370818 GP9P14770 177 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 CAMPP49913 170 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 LYZP61626 148 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 PRR31Q5SQ13 230 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 FAM162BQ5T6X4 162 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 TTC9CQ8N5M4 171 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 Q8N9W7 124 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 SIGMAR1Q99720 223 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 NAA38Q9BRA0 125 aaKnown RBP10.04□□□□□ -0.8
GPC3-201ENST00000370818 GTSF1LQ9H1H1 148 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 IGHV7-81A0A0B4J1V7 117 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 CENPVL3A0A0U1RRI6 287 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 A0A1B0GV72 72 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 VWC2LB2RUY7 222 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 FAM106CPP0CH98 169 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 BPIFA4PQ86YQ2 179 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 OR10AG1Q8NH19 301 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 HIGD1AQ9Y241 93 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 S4R3C0 116 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 ZFHX3Q15911 3703 aa10.04□□□□□ -0.8
GPC3-201ENST00000370818 SMAGPQ0VAQ4 97 aa10.03□□□□□ -0.8
GPC3-201ENST00000370818 C10orf105Q8TEF2 133 aa10.03□□□□□ -0.8
GPC3-201ENST00000370818 BLNKQ8WV28 456 aa10.03□□□□□ -0.8
GPC3-201ENST00000370818 CHCHD1Q96BP2 118 aaKnown RBP10.03□□□□□ -0.8
GPC3-201ENST00000370818 BBC3Q96PG8 261 aaPredicted RBP10.03□□□□□ -0.8
GPC3-201ENST00000370818 ATP6V0BQ99437 205 aa10.03□□□□□ -0.8
GPC3-201ENST00000370818 NPFFO15130 113 aa10.03□□□□□ -0.8
GPC3-201ENST00000370818 HIST1H1EP10412 219 aaKnown RBP10.03□□□□□ -0.8
GPC3-201ENST00000370818 PAX8Q06710 450 aa10.03□□□□□ -0.8
GPC3-201ENST00000370818 GRAMD2BQ96HH9 432 aa10.03□□□□□ -0.8
GPC3-201ENST00000370818 PMCHL2Q9BQD1 86 aa10.03□□□□□ -0.8
GPC3-201ENST00000370818 PIMREGQ9BSJ6 248 aa10.03□□□□□ -0.8
GPC3-201ENST00000370818 SLC25A39Q9BZJ4 359 aaPredicted RBP10.03□□□□□ -0.8
GPC3-201ENST00000370818 ABCA2Q9BZC7 2435 aa10.02□□□□□ -0.8
GPC3-201ENST00000370818 A0A0G2JLM5 398 aa10.02□□□□□ -0.81
GPC3-201ENST00000370818 F8W735 103 aaPredicted RBP10.02□□□□□ -0.81
GPC3-201ENST00000370818 PEX7O00628 323 aa10.02□□□□□ -0.81
GPC3-201ENST00000370818 FAM231DQ6ZW35 169 aa10.02□□□□□ -0.81
GPC3-201ENST00000370818 MAP1LC3CQ9BXW4 147 aa10.02□□□□□ -0.81
GPC3-201ENST00000370818 ZFYVE26Q68DK2 2539 aa10.02□□□□□ -0.81
GPC3-201ENST00000370818 FOXA3P55318 350 aaPredicted RBP10.02□□□□□ -0.81
GPC3-201ENST00000370818 A0A1B0GXF2 115 aa10.01□□□□□ -0.81
GPC3-201ENST00000370818 GNG5P63218 68 aa10.01□□□□□ -0.81
GPC3-201ENST00000370818 SCGB2A2Q13296 93 aa10.01□□□□□ -0.81
GPC3-201ENST00000370818 ZNF491Q8N8L2 437 aa10.01□□□□□ -0.81
GPC3-201ENST00000370818 OR5A1Q8NGJ0 315 aa10.01□□□□□ -0.81
GPC3-201ENST00000370818 A6NDN8 102 aa10.01□□□□□ -0.81
GPC3-201ENST00000370818 HIGD1CA8MV81 97 aa10.01□□□□□ -0.81
GPC3-201ENST00000370818 H3BTX0 84 aa10.01□□□□□ -0.81
GPC3-201ENST00000370818 OR5AL1P0C617 328 aa10.01□□□□□ -0.81
GPC3-201ENST00000370818 ATP5J2P56134 94 aa10.01□□□□□ -0.81
GPC3-201ENST00000370818 HSD52Q0P140 79 aa10.01□□□□□ -0.81
GPC3-201ENST00000370818 EPDR1Q9UM22 224 aa10.01□□□□□ -0.81
GPC3-201ENST00000370818 IGHV4-30-2A0A087WSY4 118 aa10□□□□□ -0.81
GPC3-201ENST00000370818 TEX48A0A1B0GUV7 120 aa10□□□□□ -0.81
GPC3-201ENST00000370818 PGPA6NDG6 321 aa10□□□□□ -0.81
GPC3-201ENST00000370818 KIR3DS1Q14943 382 aa10□□□□□ -0.81
GPC3-201ENST00000370818 LINC01545Q5VT33 79 aa10□□□□□ -0.81
GPC3-201ENST00000370818 ZNF48Q96MX3 618 aaPredicted RBP10□□□□□ -0.81
GPC3-201ENST00000370818 THYN1Q9P016 225 aa10□□□□□ -0.81
GPC3-201ENST00000370818 SPG11Q96JI7 2443 aa10□□□□□ -0.81
GPC3-201ENST00000370818 TMEM189A5PLL7 270 aa10□□□□□ -0.81
GPC3-201ENST00000370818 H0Y8G0 127 aa10□□□□□ -0.81
GPC3-201ENST00000370818 FGF6P10767 208 aa10□□□□□ -0.81
GPC3-201ENST00000370818 RPL24P83731 157 aaKnown RBP10□□□□□ -0.81
GPC3-201ENST00000370818 ATP5L2Q7Z4Y8 100 aa10□□□□□ -0.81
GPC3-201ENST00000370818 TMEM14CQ9P0S9 112 aa10□□□□□ -0.81
GPC3-201ENST00000370818 SPCS1Q9Y6A9 102 aa10□□□□□ -0.81
GPC3-201ENST00000370818 CSMD2Q7Z408 3487 aa10□□□□□ -0.81
GPC3-201ENST00000370818 IGHV3OR16-10A0A075B7F0 116 aa9.99□□□□□ -0.81
GPC3-201ENST00000370818 A0A1W2PPM0 123 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms