RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 DEFB121Q5J5C9 76 aa15.75■□□□□ 0.11
LMO4-202ENST00000370544 HELZP42694 1942 aaKnown RBP15.75■□□□□ 0.11
LMO4-202ENST00000370544 TRBV19A0A075B6N1 114 aa15.75■□□□□ 0.11
LMO4-202ENST00000370544 NPC2P61916 151 aa15.75■□□□□ 0.11
LMO4-202ENST00000370544 SYS1-DBNDD2H3BUS1 97 aa15.75■□□□□ 0.11
LMO4-202ENST00000370544 RASL10AQ92737 203 aa15.75■□□□□ 0.11
LMO4-202ENST00000370544 C1orf194Q5T5A4 169 aa15.75■□□□□ 0.11
LMO4-202ENST00000370544 TPSG1Q9NRR2 321 aa15.75■□□□□ 0.11
LMO4-202ENST00000370544 ERG28Q9UKR5 140 aa15.75■□□□□ 0.11
LMO4-202ENST00000370544 MMP23AO75900 390 aa15.74■□□□□ 0.11
LMO4-202ENST00000370544 S100A7L2Q5SY68 101 aa15.74■□□□□ 0.11
LMO4-202ENST00000370544 SAMD5Q5TGI4 173 aa15.74■□□□□ 0.11
LMO4-202ENST00000370544 C1orf159Q96HA4 380 aa15.74■□□□□ 0.11
LMO4-202ENST00000370544 C9JQL5 133 aa15.73■□□□□ 0.11
LMO4-202ENST00000370544 DKK1O94907 266 aa15.73■□□□□ 0.11
LMO4-202ENST00000370544 PFN1P07737 140 aaKnown RBP15.73■□□□□ 0.11
LMO4-202ENST00000370544 WT1-ASQ06250 92 aa15.73■□□□□ 0.11
LMO4-202ENST00000370544 PHLDA1Q8WV24 401 aaPredicted RBP15.73■□□□□ 0.11
LMO4-202ENST00000370544 KIAA2026Q5HYC2 2103 aa15.73■□□□□ 0.11
LMO4-202ENST00000370544 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.72■□□□□ 0.11
LMO4-202ENST00000370544 TNFRSF6BO95407 300 aa15.72■□□□□ 0.11
LMO4-202ENST00000370544 COL6A6A6NMZ7 2263 aa15.72■□□□□ 0.11
LMO4-202ENST00000370544 PCP4P48539 62 aa15.72■□□□□ 0.11
LMO4-202ENST00000370544 DIAPH2-AS1Q14236 149 aa15.72■□□□□ 0.11
LMO4-202ENST00000370544 J3QLI3 93 aa15.72■□□□□ 0.11
LMO4-202ENST00000370544 CR1LQ2VPA4 569 aa15.72■□□□□ 0.11
LMO4-202ENST00000370544 BCL6BQ8N143 479 aaPredicted RBP15.72■□□□□ 0.11
LMO4-202ENST00000370544 ZNF726P1Q15940 193 aa15.71■□□□□ 0.11
LMO4-202ENST00000370544 TMEM213A2RRL7 107 aa15.71■□□□□ 0.11
LMO4-202ENST00000370544 MEGF9Q9H1U4 602 aa15.71■□□□□ 0.11
LMO4-202ENST00000370544 DOCK8Q8NF50 2099 aa15.71■□□□□ 0.11
LMO4-202ENST00000370544 DEFB130BP0DP73 79 aa15.71■□□□□ 0.11
LMO4-202ENST00000370544 DEFB130AP0DP74 79 aa15.71■□□□□ 0.11
LMO4-202ENST00000370544 TDGF1P3P51864 188 aa15.71■□□□□ 0.11
LMO4-202ENST00000370544 CYYR1Q96J86 154 aa15.71■□□□□ 0.11
LMO4-202ENST00000370544 TRPT1Q86TN4 253 aaKnown RBP15.71■□□□□ 0.1
LMO4-202ENST00000370544 H3BRN7 92 aa15.7■□□□□ 0.1
LMO4-202ENST00000370544 NDUFA4O00483 81 aa15.7■□□□□ 0.1
LMO4-202ENST00000370544 POLEQ07864 2286 aa15.7■□□□□ 0.1
LMO4-202ENST00000370544 C8orf86Q6ZUL3 223 aa15.7■□□□□ 0.1
LMO4-202ENST00000370544 KAAG1Q9UBP8 84 aa15.7■□□□□ 0.1
LMO4-202ENST00000370544 GGTLC3B5MD39 225 aa15.7■□□□□ 0.1
LMO4-202ENST00000370544 SPINK13Q1W4C9 94 aa15.7■□□□□ 0.1
LMO4-202ENST00000370544 C3orf56Q8N813 242 aa15.7■□□□□ 0.1
LMO4-202ENST00000370544 FAM231BA6NCW3 169 aa15.69■□□□□ 0.1
LMO4-202ENST00000370544 PRSS46E5RG02 174 aa15.69■□□□□ 0.1
LMO4-202ENST00000370544 XCL2Q9UBD3 114 aa15.69■□□□□ 0.1
LMO4-202ENST00000370544 A8MWV9 139 aa15.69■□□□□ 0.1
LMO4-202ENST00000370544 CT83Q5H943 113 aa15.69■□□□□ 0.1
LMO4-202ENST00000370544 NUP210Q8TEM1 1887 aaPredicted RBP15.69■□□□□ 0.1
LMO4-202ENST00000370544 PAX4O43316 350 aa15.69■□□□□ 0.1
LMO4-202ENST00000370544 TRAV13-1A0A0B4J241 112 aa15.69■□□□□ 0.1
LMO4-202ENST00000370544 ATXN8Q156A1 80 aa15.69■□□□□ 0.1
LMO4-202ENST00000370544 WT1P19544 449 aaPredicted RBP15.68■□□□□ 0.1
LMO4-202ENST00000370544 HAPLN4Q86UW8 402 aa15.68■□□□□ 0.1
LMO4-202ENST00000370544 JPT2Q9H910 190 aa15.68■□□□□ 0.1
LMO4-202ENST00000370544 TMEM14CQ9P0S9 112 aa15.68■□□□□ 0.1
LMO4-202ENST00000370544 SHISA9B4DS77 424 aa15.68■□□□□ 0.1
LMO4-202ENST00000370544 ZC2HC1BQ5TFG8 222 aa15.68■□□□□ 0.1
LMO4-202ENST00000370544 CST9LQ9H4G1 147 aa15.68■□□□□ 0.1
LMO4-202ENST00000370544 PYY3Q5JQD4 70 aa15.68■□□□□ 0.1
LMO4-202ENST00000370544 KLK9Q9UKQ9 250 aa15.68■□□□□ 0.1
LMO4-202ENST00000370544 C1orf122Q6ZSJ8 110 aa15.68■□□□□ 0.1
LMO4-202ENST00000370544 WIPF3A6NGB9 483 aa15.67■□□□□ 0.1
LMO4-202ENST00000370544 FAM120AOSQ5T036 256 aa15.67■□□□□ 0.1
LMO4-202ENST00000370544 SPTBN1Q01082 2364 aaKnown RBP15.67■□□□□ 0.1
LMO4-202ENST00000370544 A0A087X0K7 114 aa15.67■□□□□ 0.1
LMO4-202ENST00000370544 GAGE13Q4V321 117 aa15.67■□□□□ 0.1
LMO4-202ENST00000370544 SLX1AQ9BQ83 275 aa15.67■□□□□ 0.1
LMO4-202ENST00000370544 KNCNA6PVL3 124 aa15.67■□□□□ 0.1
LMO4-202ENST00000370544 C6orf226Q5I0X4 101 aa15.67■□□□□ 0.1
LMO4-202ENST00000370544 Q0VG73 95 aa15.66■□□□□ 0.1
LMO4-202ENST00000370544 LY6G5BQ8NDX9 201 aa15.66■□□□□ 0.1
LMO4-202ENST00000370544 MCRIP2Q9BUT9 160 aaKnown RBP15.66■□□□□ 0.1
LMO4-202ENST00000370544 TIMM21Q9BVV7 248 aa15.66■□□□□ 0.1
LMO4-202ENST00000370544 TRAV8-4A0A0B4J246 113 aa15.66■□□□□ 0.1
LMO4-202ENST00000370544 J3QKU1 62 aa15.66■□□□□ 0.1
LMO4-202ENST00000370544 ROS1P08922 2347 aa15.66■□□□□ 0.1
LMO4-202ENST00000370544 A0A1B0GV72 72 aa15.66■□□□□ 0.1
LMO4-202ENST00000370544 K7EM74 188 aa15.66■□□□□ 0.1
LMO4-202ENST00000370544 HEATR5AQ86XA9 2040 aa15.66■□□□□ 0.1
LMO4-202ENST00000370544 NOTCH4Q99466 2003 aa15.66■□□□□ 0.1
LMO4-202ENST00000370544 GATD1Q8NB37 220 aa15.65■□□□□ 0.1
LMO4-202ENST00000370544 ZNF407Q9C0G0 2248 aa15.65■□□□□ 0.1
LMO4-202ENST00000370544 NAA38Q9BRA0 125 aaKnown RBP15.65■□□□□ 0.1
LMO4-202ENST00000370544 FAM104BQ5XKR9 115 aa15.65■□□□□ 0.1
LMO4-202ENST00000370544 THAP8Q8NA92 274 aa15.65■□□□□ 0.1
LMO4-202ENST00000370544 RHODO00212 210 aa15.65■□□□□ 0.1
LMO4-202ENST00000370544 YLPM1P49750 1951 aaKnown RBP15.65■□□□□ 0.1
LMO4-202ENST00000370544 MYMXA0A1B0GTQ4 84 aa15.65■□□□□ 0.1
LMO4-202ENST00000370544 TCTEX1D4Q5JR98 221 aa15.65■□□□□ 0.1
LMO4-202ENST00000370544 IGFL2Q6UWQ7 119 aa15.65■□□□□ 0.1
LMO4-202ENST00000370544 SPXQ9BT56 116 aa15.65■□□□□ 0.1
LMO4-202ENST00000370544 SS18Q15532 418 aa15.64■□□□□ 0.09
LMO4-202ENST00000370544 C11orf53Q8IXP5 236 aa15.64■□□□□ 0.09
LMO4-202ENST00000370544 PRR25Q96S07 402 aa15.64■□□□□ 0.09
LMO4-202ENST00000370544 IGHV1OR15-1A0A075B7D0 117 aa15.63■□□□□ 0.09
LMO4-202ENST00000370544 C22orf46C9J442 243 aa15.63■□□□□ 0.09
LMO4-202ENST00000370544 IGHV2-70P01814 119 aa15.63■□□□□ 0.09
LMO4-202ENST00000370544 IGLC1P0CG04 106 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms