RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 CXCL1P09341 107 aa6.88□□□□□ -1.31
ABCA4-201ENST00000370225 ZNF48Q96MX3 618 aaPredicted RBP6.88□□□□□ -1.31
ABCA4-201ENST00000370225 PLXNA4Q9HCM2 1894 aa6.88□□□□□ -1.31
ABCA4-201ENST00000370225 A0A0J9YY99 117 aa6.88□□□□□ -1.31
ABCA4-201ENST00000370225 ITGB1BP1O14713 200 aa6.88□□□□□ -1.31
ABCA4-201ENST00000370225 EREGO14944 169 aa6.88□□□□□ -1.31
ABCA4-201ENST00000370225 DIAPH2-AS1Q14236 149 aa6.88□□□□□ -1.31
ABCA4-201ENST00000370225 ANXA2RQ3ZCQ2 193 aa6.88□□□□□ -1.31
ABCA4-201ENST00000370225 NMSQ5H8A3 153 aa6.88□□□□□ -1.31
ABCA4-201ENST00000370225 SIGMAR1Q99720 223 aa6.88□□□□□ -1.31
ABCA4-201ENST00000370225 LAMTOR2Q9Y2Q5 125 aa6.88□□□□□ -1.31
ABCA4-201ENST00000370225 TRAV9-2A0A087WT02 112 aa6.87□□□□□ -1.31
ABCA4-201ENST00000370225 TRAV26-2A0A0B4J265 109 aa6.87□□□□□ -1.31
ABCA4-201ENST00000370225 ATXN8Q156A1 80 aa6.87□□□□□ -1.31
ABCA4-201ENST00000370225 ASPHD1Q5U4P2 390 aa6.87□□□□□ -1.31
ABCA4-201ENST00000370225 LIME1Q9H400 295 aa6.87□□□□□ -1.31
ABCA4-201ENST00000370225 TPSG1Q9NRR2 321 aa6.87□□□□□ -1.31
ABCA4-201ENST00000370225 TCF15Q12870 199 aa6.87□□□□□ -1.31
ABCA4-201ENST00000370225 ZNF114Q8NC26 417 aa6.87□□□□□ -1.31
ABCA4-201ENST00000370225 DLX4Q92988 240 aaPredicted RBP6.87□□□□□ -1.31
ABCA4-201ENST00000370225 PLA2G2CQ5R387 149 aa6.87□□□□□ -1.31
ABCA4-201ENST00000370225 TEX36Q5VZQ5 186 aa6.87□□□□□ -1.31
ABCA4-201ENST00000370225 TIMM21Q9BVV7 248 aa6.87□□□□□ -1.31
ABCA4-201ENST00000370225 Q6ZR03 302 aa6.87□□□□□ -1.31
ABCA4-201ENST00000370225 MYLKQ15746 1914 aa6.87□□□□□ -1.31
ABCA4-201ENST00000370225 RPL32P62910 135 aaKnown RBP6.86□□□□□ -1.31
ABCA4-201ENST00000370225 ZNF562Q6V9R5 426 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 USF3Q68DE3 2245 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 HIST1H2BKO60814 126 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 HIST1H2BJP06899 126 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 HIST1H2BOP23527 126 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 HIST1H2BBP33778 126 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 HIST1H2BDP58876 126 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 HIST1H2BCP62807 126 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 HIST2H2BEQ16778 126 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.86□□□□□ -1.31
ABCA4-201ENST00000370225 LHFPL1Q86WI0 220 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 THAP8Q8NA92 274 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 HIST1H2BHQ93079 126 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 HIST1H2BNQ99877 126 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 HIST1H2BMQ99879 126 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 SHANK2-AS3Q9BTD1 123 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 ANAPC10Q9UM13 185 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 TRBV25-1A0A075B6N4 114 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 TRAV8-3A0A0A6YYJ7 113 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 ORAOV1Q8WV07 137 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 SIP14410 1827 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 ZNF407Q9C0G0 2248 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 TMEM213A2RRL7 107 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 IGHV4-59P01825 116 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 NKAPP1Q8N9T2 125 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 HOXD3P31249 432 aaPredicted RBP6.86□□□□□ -1.31
ABCA4-201ENST00000370225 SAMD5Q5TGI4 173 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 TMEM14EPQ6UXP3 125 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 Q6ZRM9 215 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 NEGR1Q7Z3B1 354 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 ZNRF2Q8NHG8 242 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 GSN-AS1Q9NRJ2 163 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 NXPH4O95158 308 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 GUSBP1Q15486 140 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 DEFB112Q30KQ8 113 aa6.86□□□□□ -1.31
ABCA4-201ENST00000370225 C8orf86Q6ZUL3 223 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 PLEKHB2Q96CS7 222 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 KMT2EQ8IZD2 1858 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 IGKV1-39P01597 117 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 IGKV1D-39P04432 117 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 SUMO4Q6EEV6 95 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 Q86TA4 180 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 ZNF479Q96JC4 524 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 Q9HAA7 133 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 TSC2P49815 1807 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 IGFL3Q6UXB1 125 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 LINC01551Q86U37 167 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 PROK2Q9HC23 129 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 TMEM242Q9NWH2 141 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 MPZP25189 248 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 PMVKQ15126 192 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 RNASE13Q5GAN3 156 aaKnown RBP6.85□□□□□ -1.31
ABCA4-201ENST00000370225 FAM90A2PQ658T7 463 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 TRPT1Q86TN4 253 aaKnown RBP6.85□□□□□ -1.31
ABCA4-201ENST00000370225 NBL1P41271 181 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 QRFPP83859 136 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 C17orf58Q2M2W7 97 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 WDR86Q86TI4 376 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 VWC2Q2TAL6 325 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 RASL11AQ6T310 242 aa6.85□□□□□ -1.31
ABCA4-201ENST00000370225 A0A087X0K7 114 aa6.84□□□□□ -1.31
ABCA4-201ENST00000370225 SVIPQ8NHG7 77 aa6.84□□□□□ -1.31
ABCA4-201ENST00000370225 TP53TG1Q9Y2A0 90 aa6.84□□□□□ -1.31
ABCA4-201ENST00000370225 A8MWV9 139 aa6.84□□□□□ -1.31
ABCA4-201ENST00000370225 TMEM126AQ9H061 195 aa6.84□□□□□ -1.31
ABCA4-201ENST00000370225 FAM215AQ9Y5M1 114 aa6.84□□□□□ -1.31
ABCA4-201ENST00000370225 BCL6BQ8N143 479 aaPredicted RBP6.84□□□□□ -1.31
ABCA4-201ENST00000370225 CYTL1Q9NRR1 136 aa6.84□□□□□ -1.31
ABCA4-201ENST00000370225 WNK2Q9Y3S1 2297 aa6.84□□□□□ -1.31
ABCA4-201ENST00000370225 IGLV3-9A0A075B6K5 115 aa6.84□□□□□ -1.31
ABCA4-201ENST00000370225 IGKV1OR2-108A0A075B7D4 117 aa6.84□□□□□ -1.31
ABCA4-201ENST00000370225 HOXB4P17483 251 aaPredicted RBP6.84□□□□□ -1.31
ABCA4-201ENST00000370225 LOXP28300 417 aaPredicted RBP6.84□□□□□ -1.31
ABCA4-201ENST00000370225 MYMXA0A1B0GTQ4 84 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms