RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 HLA-DRB4X5D2U9 266 aa11.48□□□□□ -0.57
PRPF38B-202ENST00000370022 EIF3GO75821 320 aaKnown RBP eCLIP11.47□□□□□ -0.57
PRPF38B-202ENST00000370022 APOC4P55056 127 aa11.47□□□□□ -0.57
PRPF38B-202ENST00000370022 IGFL4Q6B9Z1 124 aa11.47□□□□□ -0.57
PRPF38B-202ENST00000370022 SSX7Q7RTT5 188 aa11.47□□□□□ -0.57
PRPF38B-202ENST00000370022 CLUHP3Q96NS8 147 aa11.47□□□□□ -0.57
PRPF38B-202ENST00000370022 PLA2G2EQ9NZK7 142 aa11.47□□□□□ -0.57
PRPF38B-202ENST00000370022 A0A0J9YX75 114 aa11.46□□□□□ -0.57
PRPF38B-202ENST00000370022 KNCNA6PVL3 124 aa11.46□□□□□ -0.57
PRPF38B-202ENST00000370022 H3BMM0 161 aa11.46□□□□□ -0.57
PRPF38B-202ENST00000370022 GCHFRP30047 84 aa11.46□□□□□ -0.57
PRPF38B-202ENST00000370022 TRPT1Q86TN4 253 aaKnown RBP11.46□□□□□ -0.57
PRPF38B-202ENST00000370022 FAM213BQ8TBF2 198 aa11.46□□□□□ -0.57
PRPF38B-202ENST00000370022 RPUSD4Q96CM3 377 aaKnown RBP11.46□□□□□ -0.57
PRPF38B-202ENST00000370022 MAP1LC3B2A6NCE7 125 aa11.45□□□□□ -0.58
PRPF38B-202ENST00000370022 DUSP14O95147 198 aaKnown RBP11.45□□□□□ -0.58
PRPF38B-202ENST00000370022 HLA-DMBP28068 263 aa11.45□□□□□ -0.58
PRPF38B-202ENST00000370022 SULT1A2P50226 295 aa11.45□□□□□ -0.58
PRPF38B-202ENST00000370022 RANP62826 216 aaKnown RBP11.45□□□□□ -0.58
PRPF38B-202ENST00000370022 TOR2AQ5JU69 321 aa11.45□□□□□ -0.58
PRPF38B-202ENST00000370022 FAM74A1Q5RGS3 127 aa11.45□□□□□ -0.58
PRPF38B-202ENST00000370022 MBD3L1Q8WWY6 194 aa11.45□□□□□ -0.58
PRPF38B-202ENST00000370022 MAP1LC3BQ9GZQ8 125 aa11.45□□□□□ -0.58
PRPF38B-202ENST00000370022 UBE2CO00762 179 aa11.45□□□□□ -0.58
PRPF38B-202ENST00000370022 BTF3P20290 206 aaKnown RBP11.45□□□□□ -0.58
PRPF38B-202ENST00000370022 FHITP49789 147 aa11.45□□□□□ -0.58
PRPF38B-202ENST00000370022 NUTF2P61970 127 aaKnown RBP11.45□□□□□ -0.58
PRPF38B-202ENST00000370022 HAGHQ16775 308 aa11.45□□□□□ -0.58
PRPF38B-202ENST00000370022 GDF5OSQ5U4N7 250 aa11.45□□□□□ -0.58
PRPF38B-202ENST00000370022 MORN3Q6PF18 240 aaPredicted RBP11.45□□□□□ -0.58
PRPF38B-202ENST00000370022 EXOC3-AS1Q8N2X6 119 aa11.45□□□□□ -0.58
PRPF38B-202ENST00000370022 Q9H3A6 140 aa11.45□□□□□ -0.58
PRPF38B-202ENST00000370022 BOLA1Q9Y3E2 137 aa11.45□□□□□ -0.58
PRPF38B-202ENST00000370022 F6UB75 175 aa11.44□□□□□ -0.58
PRPF38B-202ENST00000370022 H2AFB1P0C5Y9 115 aa11.44□□□□□ -0.58
PRPF38B-202ENST00000370022 RPL35AP18077 110 aaKnown RBP11.44□□□□□ -0.58
PRPF38B-202ENST00000370022 ICAM4Q14773 271 aa11.44□□□□□ -0.58
PRPF38B-202ENST00000370022 SBSPONQ8IVN8 264 aa11.44□□□□□ -0.58
PRPF38B-202ENST00000370022 OR8A1Q8NGG7 326 aa11.44□□□□□ -0.58
PRPF38B-202ENST00000370022 RXFP4Q8TDU9 374 aa11.44□□□□□ -0.58
PRPF38B-202ENST00000370022 SFT2D1Q8WV19 159 aa11.44□□□□□ -0.58
PRPF38B-202ENST00000370022 CSTL1Q9H114 145 aa11.44□□□□□ -0.58
PRPF38B-202ENST00000370022 OTORQ9NRC9 128 aa11.44□□□□□ -0.58
PRPF38B-202ENST00000370022 NHLRC4P0CG21 123 aaPredicted RBP11.43□□□□□ -0.58
PRPF38B-202ENST00000370022 CSN1S1P47710 185 aa11.43□□□□□ -0.58
PRPF38B-202ENST00000370022 ARL6IP6Q8N6S5 226 aa11.43□□□□□ -0.58
PRPF38B-202ENST00000370022 OR10J6PQ8NGY7 276 aa11.43□□□□□ -0.58
PRPF38B-202ENST00000370022 A8MTW9 85 aa11.42□□□□□ -0.58
PRPF38B-202ENST00000370022 ZNF705FA8MVS1 300 aaPredicted RBP11.42□□□□□ -0.58
PRPF38B-202ENST00000370022 TEX46H3BTG2 121 aa11.42□□□□□ -0.58
PRPF38B-202ENST00000370022 M0R3E3 92 aa11.42□□□□□ -0.58
PRPF38B-202ENST00000370022 CNN1P51911 297 aaKnown RBP11.42□□□□□ -0.58
PRPF38B-202ENST00000370022 FGF8P55075 233 aaPredicted RBP11.42□□□□□ -0.58
PRPF38B-202ENST00000370022 DEFB1P60022 68 aa11.42□□□□□ -0.58
PRPF38B-202ENST00000370022 OR4B1Q8NGF8 309 aa11.42□□□□□ -0.58
PRPF38B-202ENST00000370022 A0A1W2PRE2 83 aa11.41□□□□□ -0.58
PRPF38B-202ENST00000370022 HIST1H1AQ02539 215 aaPredicted RBP11.41□□□□□ -0.58
PRPF38B-202ENST00000370022 Q6ZWC4 215 aa11.41□□□□□ -0.58
PRPF38B-202ENST00000370022 CMTM2Q8TAZ6 248 aa11.41□□□□□ -0.58
PRPF38B-202ENST00000370022 NKX6-2Q9C056 277 aaPredicted RBP11.41□□□□□ -0.58
PRPF38B-202ENST00000370022 TRAV1-1A0A0B4J248 108 aa11.41□□□□□ -0.58
PRPF38B-202ENST00000370022 PGPA6NDG6 321 aa11.41□□□□□ -0.58
PRPF38B-202ENST00000370022 PPT1P50897 306 aa11.41□□□□□ -0.58
PRPF38B-202ENST00000370022 SSTP61278 116 aa11.41□□□□□ -0.58
PRPF38B-202ENST00000370022 ALKAL2Q6UX46 152 aa11.41□□□□□ -0.58
PRPF38B-202ENST00000370022 SPATA25Q9BR10 227 aa11.41□□□□□ -0.58
PRPF38B-202ENST00000370022 TM2D3Q9BRN9 247 aa11.41□□□□□ -0.58
PRPF38B-202ENST00000370022 C1QTNF4Q9BXJ3 329 aa11.41□□□□□ -0.58
PRPF38B-202ENST00000370022 TMPRSS5Q9H3S3 457 aa11.41□□□□□ -0.58
PRPF38B-202ENST00000370022 ZMAT4Q9H898 229 aa11.41□□□□□ -0.58
PRPF38B-202ENST00000370022 ARL2-SNX15V9GYD0 113 aa11.41□□□□□ -0.58
PRPF38B-202ENST00000370022 PRKDCP78527 4128 aaKnown RBP11.4□□□□□ -0.58
PRPF38B-202ENST00000370022 RBAKDNA6NC62 111 aa11.4□□□□□ -0.58
PRPF38B-202ENST00000370022 PRAC2D3DTV9 90 aa11.4□□□□□ -0.58
PRPF38B-202ENST00000370022 CA1P00915 261 aaPredicted RBP11.4□□□□□ -0.58
PRPF38B-202ENST00000370022 HBE1P02100 147 aa11.4□□□□□ -0.58
PRPF38B-202ENST00000370022 ASCL2Q99929 193 aa11.4□□□□□ -0.58
PRPF38B-202ENST00000370022 ZNF705EA8MWA4 302 aaPredicted RBP11.39□□□□□ -0.59
PRPF38B-202ENST00000370022 NPIPB6E9PJ23 425 aa11.39□□□□□ -0.59
PRPF38B-202ENST00000370022 IGKV3-20P01619 116 aa11.39□□□□□ -0.59
PRPF38B-202ENST00000370022 SLC25A5P05141 298 aaKnown RBP11.39□□□□□ -0.59
PRPF38B-202ENST00000370022 ZNF705DP0CH99 300 aaPredicted RBP11.39□□□□□ -0.59
PRPF38B-202ENST00000370022 ZNF705BP0CI00 300 aaPredicted RBP11.39□□□□□ -0.59
PRPF38B-202ENST00000370022 C5orf17Q8NAS9 161 aa11.39□□□□□ -0.59
PRPF38B-202ENST00000370022 PPP1R14DQ9NXH3 145 aa11.39□□□□□ -0.59
PRPF38B-202ENST00000370022 TP53TG1Q9Y2A0 90 aa11.39□□□□□ -0.59
PRPF38B-202ENST00000370022 SERTM2A0A1B0GWG4 89 aa11.38□□□□□ -0.59
PRPF38B-202ENST00000370022 DIRC3C9JPN6 131 aa11.38□□□□□ -0.59
PRPF38B-202ENST00000370022 SNAPINO95295 136 aa11.38□□□□□ -0.59
PRPF38B-202ENST00000370022 AMBPP02760 352 aa11.38□□□□□ -0.59
PRPF38B-202ENST00000370022 AMTNQ6UX39 209 aa11.38□□□□□ -0.59
PRPF38B-202ENST00000370022 LINC00477Q96M19 166 aa11.38□□□□□ -0.59
PRPF38B-202ENST00000370022 ODF3Q96PU9 254 aa11.38□□□□□ -0.59
PRPF38B-202ENST00000370022 TGP01266 2768 aa11.38□□□□□ -0.59
PRPF38B-202ENST00000370022 FAM74A7A6NL05 159 aa11.37□□□□□ -0.59
PRPF38B-202ENST00000370022 GGTLC3B5MD39 225 aa11.37□□□□□ -0.59
PRPF38B-202ENST00000370022 SUMO1P63165 101 aaKnown RBP11.37□□□□□ -0.59
PRPF38B-202ENST00000370022 BLOC1S1P78537 153 aa11.37□□□□□ -0.59
PRPF38B-202ENST00000370022 C9orf47Q6ZRZ4 202 aa11.37□□□□□ -0.59
PRPF38B-202ENST00000370022 TCEAL7Q9BRU2 100 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms