RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 CRYGSP22914 178 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 HBG1P69891 147 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 HBG2P69892 147 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 KRTAP24-1Q3LI83 254 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 FAM201AQ5SY85 155 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 CFAP126Q5VTH2 177 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 ATP5L2Q7Z4Y8 100 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 OR2T6Q8NHC8 308 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 OTOSQ8NHW6 89 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 NMNAT3Q96T66 252 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 OR10A2Q9H208 303 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 RPUSD1Q9UJJ7 312 aaKnown RBP4□□□□□ -1.77
UBE3D-202ENST00000369746 RP1P56715 2156 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 A0A0G2JNJ9 132 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 TEX50A0A1B0GTY4 177 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 INAFM1C9JVW0 142 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 RNF223E7ERA6 249 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 COX6A1P12074 109 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 FBXW4P57775 412 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 KLF17Q5JT82 389 aaPredicted RBP4□□□□□ -1.77
UBE3D-202ENST00000369746 NUP35Q8NFH5 326 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 LINC00526Q96FQ7 95 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 TNFRSF19Q9NS68 423 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 Q9UFV3 132 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 LRRK2Q5S007 2527 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 TRAV26-2A0A0B4J265 109 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 IGLL5B9A064 214 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 NDUFS7O75251 213 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 PFN2P35080 140 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 DAZ2Q13117 558 aaKnown RBP3.99□□□□□ -1.77
UBE3D-202ENST00000369746 LAGE3Q14657 143 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 DAZ4Q86SG3 579 aaKnown RBP3.99□□□□□ -1.77
UBE3D-202ENST00000369746 ODF3L1Q8IXM7 274 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 CIARTQ8N365 385 aaPredicted RBP3.99□□□□□ -1.77
UBE3D-202ENST00000369746 PLEKHB2Q96CS7 222 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 DAZ1Q9NQZ3 744 aaKnown RBP3.99□□□□□ -1.77
UBE3D-202ENST00000369746 DAZ3Q9NR90 486 aaKnown RBP3.99□□□□□ -1.77
UBE3D-202ENST00000369746 ANK2Q01484 3957 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 HIVEP1P15822 2718 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 IGHV5-51A0A0C4DH38 117 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 TRBV7-7A0A0K0K1E9 115 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 LOC107986453A0A1B0GWG9 222 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 SMIM27A0A1W2PRY6 76 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 IZUMO1RA6ND01 250 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 C11orf94C9JXX5 98 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 C8orf87E5RJ46 101 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 TIMM23O14925 209 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 PAX4O43316 350 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 NMUP48645 174 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 ZNF136P52737 540 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 B3GALT5-AS1P59052 145 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 HERVK_113P63121 156 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 FHL1Q13642 323 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 C3orf22Q8N5N4 141 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 LRRC29Q8WV35 223 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 PIEZO2Q9H5I5 2752 aa3.99□□□□□ -1.77
UBE3D-202ENST00000369746 IGLV3-16A0A075B6K0 115 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 TRAV5A0A0B4J249 113 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 LEPROTL1O95214 131 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 ZNF20P17024 532 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 GFERP55789 205 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 TMEM258P61165 79 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 WDR38Q5JTN6 314 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 TMEM14EPQ6UXP3 125 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 SH2D6Q7Z4S9 175 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 SFTPA2Q8IWL1 248 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 ZNF525Q8N782 197 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 RBM12B-AS1Q9P1G2 102 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 PYGO1Q9Y3Y4 419 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 V9GYV3 84 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 SNRNP200O75643 2136 aaKnown RBP3.98□□□□□ -1.77
UBE3D-202ENST00000369746 TLN1Q9Y490 2541 aaKnown RBP3.98□□□□□ -1.77
UBE3D-202ENST00000369746 KIAA2026Q5HYC2 2103 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 HIVEP3Q5T1R4 2406 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 hDV102S1A0JD36 115 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 OVOL1O14753 267 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 NDUFC2O95298 119 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 COX5AP20674 150 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 GNB1P62873 340 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 CACNG7P62955 275 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 SPTAN1Q13813 2472 aaKnown RBP3.98□□□□□ -1.77
UBE3D-202ENST00000369746 CLEC12BQ2HXU8 276 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 RRN3P1Q2M238 152 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 LGALS9BQ3B8N2 356 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 KPRPQ5T749 579 aaPredicted RBP3.98□□□□□ -1.77
UBE3D-202ENST00000369746 LGALS9CQ6DKI2 356 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 RAB42Q8N4Z0 105 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 CCL4L1Q8NHW4 92 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 FXYD5Q96DB9 178 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 C18orf15Q96N68 181 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 SELENOKQ9Y6D0 94 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 NF1P21359 2839 aa3.98□□□□□ -1.77
UBE3D-202ENST00000369746 C17orf51A8MQB3 221 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 PRR32B1ATL7 298 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 RRHO14718 337 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 PPYP01298 95 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 IGHMP01871 453 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 CRYGAP11844 174 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 HLA-DOBP13765 273 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 CTLA4P16410 223 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms