RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 H3BT86 120 aa8.41□□□□□ -1.06
PRDM1-201ENST00000369089 RNASE1P07998 156 aaKnown RBP8.41□□□□□ -1.06
PRDM1-201ENST00000369089 MRPL51Q4U2R6 128 aaKnown RBP8.41□□□□□ -1.06
PRDM1-201ENST00000369089 Q86TA4 180 aa8.41□□□□□ -1.06
PRDM1-201ENST00000369089 IGKV1-27A0A075B6S5 117 aa8.4□□□□□ -1.06
PRDM1-201ENST00000369089 IGKV1-39P01597 117 aa8.4□□□□□ -1.06
PRDM1-201ENST00000369089 IGKV1D-39P04432 117 aa8.4□□□□□ -1.06
PRDM1-201ENST00000369089 COX7CP15954 63 aa8.4□□□□□ -1.06
PRDM1-201ENST00000369089 Q8N8P6 123 aa8.4□□□□□ -1.06
PRDM1-201ENST00000369089 U3KQE9 123 aa8.4□□□□□ -1.06
PRDM1-201ENST00000369089 RPL27AP46776 148 aaKnown RBP8.4□□□□□ -1.06
PRDM1-201ENST00000369089 NBASA2RRP1 2371 aa8.4□□□□□ -1.06
PRDM1-201ENST00000369089 TRBV6-6A0A0A6YYG2 114 aa8.4□□□□□ -1.07
PRDM1-201ENST00000369089 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.4□□□□□ -1.07
PRDM1-201ENST00000369089 CDIP1Q9H305 208 aa8.4□□□□□ -1.07
PRDM1-201ENST00000369089 UPK2O00526 184 aa8.39□□□□□ -1.07
PRDM1-201ENST00000369089 RPL39P5Q59GN2 51 aa8.39□□□□□ -1.07
PRDM1-201ENST00000369089 DDB2Q92466 427 aa8.39□□□□□ -1.07
PRDM1-201ENST00000369089 LAMTOR3Q9UHA4 124 aa8.39□□□□□ -1.07
PRDM1-201ENST00000369089 OVOL2Q9BRP0 275 aa8.39□□□□□ -1.07
PRDM1-201ENST00000369089 F8WDY8 70 aa8.39□□□□□ -1.07
PRDM1-201ENST00000369089 TGFBR3LH3BV60 316 aa8.39□□□□□ -1.07
PRDM1-201ENST00000369089 TIMM23O14925 209 aa8.39□□□□□ -1.07
PRDM1-201ENST00000369089 TTC28Q96AY4 2481 aa8.39□□□□□ -1.07
PRDM1-201ENST00000369089 IGHV1-45A0A0A0MS14 117 aa8.39□□□□□ -1.07
PRDM1-201ENST00000369089 PFN2P35080 140 aa8.39□□□□□ -1.07
PRDM1-201ENST00000369089 GFRALQ6UXV0 394 aa8.39□□□□□ -1.07
PRDM1-201ENST00000369089 ZNF497Q6ZNH5 498 aa8.39□□□□□ -1.07
PRDM1-201ENST00000369089 LYPD6Q86Y78 171 aa8.39□□□□□ -1.07
PRDM1-201ENST00000369089 WFDC11Q8NEX6 87 aa8.39□□□□□ -1.07
PRDM1-201ENST00000369089 J3QLI3 93 aa8.38□□□□□ -1.07
PRDM1-201ENST00000369089 IL17RELQ6ZVW7 336 aa8.38□□□□□ -1.07
PRDM1-201ENST00000369089 PTPRDP23468 1912 aa8.38□□□□□ -1.07
PRDM1-201ENST00000369089 RBAKDNA6NC62 111 aa8.38□□□□□ -1.07
PRDM1-201ENST00000369089 PRSS46E5RG02 174 aa8.38□□□□□ -1.07
PRDM1-201ENST00000369089 PRCDQ00LT1 54 aa8.38□□□□□ -1.07
PRDM1-201ENST00000369089 DTX2Q86UW9 622 aa8.38□□□□□ -1.07
PRDM1-201ENST00000369089 C10orf105Q8TEF2 133 aa8.38□□□□□ -1.07
PRDM1-201ENST00000369089 LINC00526Q96FQ7 95 aa8.38□□□□□ -1.07
PRDM1-201ENST00000369089 RETNQ9HD89 108 aa8.38□□□□□ -1.07
PRDM1-201ENST00000369089 FOXA2Q9Y261 457 aaPredicted RBP8.38□□□□□ -1.07
PRDM1-201ENST00000369089 FAM236DA0A1B0GTK5 79 aa8.38□□□□□ -1.07
PRDM1-201ENST00000369089 FAM236CP0DP71 79 aa8.38□□□□□ -1.07
PRDM1-201ENST00000369089 MALP21145 153 aa8.38□□□□□ -1.07
PRDM1-201ENST00000369089 ASPHD1Q5U4P2 390 aa8.38□□□□□ -1.07
PRDM1-201ENST00000369089 RS1O15537 224 aa8.38□□□□□ -1.07
PRDM1-201ENST00000369089 RPL35AP18077 110 aaKnown RBP8.38□□□□□ -1.07
PRDM1-201ENST00000369089 SIGLEC15Q6ZMC9 328 aa8.38□□□□□ -1.07
PRDM1-201ENST00000369089 Q6ZR03 302 aa8.38□□□□□ -1.07
PRDM1-201ENST00000369089 MGAMO43451 1857 aa8.37□□□□□ -1.07
PRDM1-201ENST00000369089 FOXG1P55316 489 aaPredicted RBP8.37□□□□□ -1.07
PRDM1-201ENST00000369089 CCL8P80075 99 aa8.37□□□□□ -1.07
PRDM1-201ENST00000369089 FNDC1Q4ZHG4 1894 aaPredicted RBP8.37□□□□□ -1.07
PRDM1-201ENST00000369089 IGKV1-6A0A0C4DH72 117 aa8.37□□□□□ -1.07
PRDM1-201ENST00000369089 APELAP0DMC3 54 aa8.37□□□□□ -1.07
PRDM1-201ENST00000369089 DUTP33316 252 aaKnown RBP8.37□□□□□ -1.07
PRDM1-201ENST00000369089 PEAR1Q5VY43 1037 aaPredicted RBP8.37□□□□□ -1.07
PRDM1-201ENST00000369089 ZFP2Q6ZN57 461 aa8.37□□□□□ -1.07
PRDM1-201ENST00000369089 FLVCR1-AS1Q8TAF5 88 aa8.37□□□□□ -1.07
PRDM1-201ENST00000369089 M0R381 172 aa8.37□□□□□ -1.07
PRDM1-201ENST00000369089 SOCS3O14543 225 aa8.37□□□□□ -1.07
PRDM1-201ENST00000369089 IGHG2P01859 326 aa8.37□□□□□ -1.07
PRDM1-201ENST00000369089 RNASE2P10153 161 aaKnown RBP8.37□□□□□ -1.07
PRDM1-201ENST00000369089 SPRY4Q9C004 299 aa8.37□□□□□ -1.07
PRDM1-201ENST00000369089 ZNF318Q5VUA4 2279 aa8.37□□□□□ -1.07
PRDM1-201ENST00000369089 PI4KAP42356 2102 aa8.37□□□□□ -1.07
PRDM1-201ENST00000369089 MOB4Q9Y3A3 225 aa8.36□□□□□ -1.07
PRDM1-201ENST00000369089 ROS1P08922 2347 aa8.36□□□□□ -1.07
PRDM1-201ENST00000369089 IGKV3D-11A0A0A0MRZ8 115 aa8.36□□□□□ -1.07
PRDM1-201ENST00000369089 FGFBP3Q8TAT2 258 aa8.36□□□□□ -1.07
PRDM1-201ENST00000369089 PIFOQ8TCI5 191 aa8.36□□□□□ -1.07
PRDM1-201ENST00000369089 IGFBPL1Q8WX77 278 aa8.36□□□□□ -1.07
PRDM1-201ENST00000369089 IGF2BP2-AS1Q96M15 143 aa8.36□□□□□ -1.07
PRDM1-201ENST00000369089 JPT2Q9H910 190 aa8.36□□□□□ -1.07
PRDM1-201ENST00000369089 IGHV3-64A0A075B6Q5 118 aa8.36□□□□□ -1.07
PRDM1-201ENST00000369089 SPRY3O43610 288 aa8.36□□□□□ -1.07
PRDM1-201ENST00000369089 CRYGSP22914 178 aa8.36□□□□□ -1.07
PRDM1-201ENST00000369089 PCOLCEQ15113 449 aa8.36□□□□□ -1.07
PRDM1-201ENST00000369089 SPTAN1Q13813 2472 aaKnown RBP8.36□□□□□ -1.07
PRDM1-201ENST00000369089 ZNF493Q6ZR52 646 aa8.36□□□□□ -1.07
PRDM1-201ENST00000369089 FAM240AA0A1B0GVK7 77 aa8.35□□□□□ -1.07
PRDM1-201ENST00000369089 CRYGBP07316 175 aa8.35□□□□□ -1.07
PRDM1-201ENST00000369089 TTTY12Q9BZ98 90 aa8.35□□□□□ -1.07
PRDM1-201ENST00000369089 SH2D1AO60880 128 aa8.35□□□□□ -1.07
PRDM1-201ENST00000369089 TRPT1Q86TN4 253 aaKnown RBP8.35□□□□□ -1.07
PRDM1-201ENST00000369089 ZNF503Q96F45 646 aa8.35□□□□□ -1.07
PRDM1-201ENST00000369089 TEX49A0A1B0GTD5 131 aa8.35□□□□□ -1.07
PRDM1-201ENST00000369089 RPS28P62857 69 aaKnown RBP8.35□□□□□ -1.07
PRDM1-201ENST00000369089 NDUFA11Q86Y39 141 aa8.35□□□□□ -1.07
PRDM1-201ENST00000369089 RNF152Q8N8N0 203 aa8.35□□□□□ -1.07
PRDM1-201ENST00000369089 VWC2LB2RUY7 222 aa8.35□□□□□ -1.07
PRDM1-201ENST00000369089 LGALS9O00182 355 aa8.35□□□□□ -1.07
PRDM1-201ENST00000369089 EXOC3-AS1Q8N2X6 119 aa8.35□□□□□ -1.07
PRDM1-201ENST00000369089 ZNF71Q9NQZ8 489 aaPredicted RBP8.35□□□□□ -1.07
PRDM1-201ENST00000369089 LRRK1Q38SD2 2015 aa8.34□□□□□ -1.07
PRDM1-201ENST00000369089 A0A1B0GXF2 115 aa8.34□□□□□ -1.07
PRDM1-201ENST00000369089 NDUFC2-KCTD14E9PQ53 114 aa8.34□□□□□ -1.07
PRDM1-201ENST00000369089 REPIN1Q9BWE0 567 aaKnown RBP8.34□□□□□ -1.07
PRDM1-201ENST00000369089 TCF20Q9UGU0 1960 aaKnown RBP8.34□□□□□ -1.07
PRDM1-201ENST00000369089 RALGAPA1Q6GYQ0 2036 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms