RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 CLINT1Q14677 625 aa11.14□□□□□ -0.63
CKS1B-202ENST00000368436 DNAJC4Q9NNZ3 241 aa11.14□□□□□ -0.63
CKS1B-202ENST00000368436 C16orf90A8MZG2 172 aa11.13□□□□□ -0.63
CKS1B-202ENST00000368436 CDK2AP2O75956 126 aa11.13□□□□□ -0.63
CKS1B-202ENST00000368436 M6PRP20645 277 aa11.13□□□□□ -0.63
CKS1B-202ENST00000368436 HOXA5P20719 270 aa11.13□□□□□ -0.63
CKS1B-202ENST00000368436 CAMLGP49069 296 aa11.13□□□□□ -0.63
CKS1B-202ENST00000368436 GUK1Q16774 197 aa11.13□□□□□ -0.63
CKS1B-202ENST00000368436 CCDC28AQ8IWP9 274 aa11.13□□□□□ -0.63
CKS1B-202ENST00000368436 RXFP4Q8TDU9 374 aa11.13□□□□□ -0.63
CKS1B-202ENST00000368436 GNPNAT1Q96EK6 184 aaPredicted RBP11.13□□□□□ -0.63
CKS1B-202ENST00000368436 ODF3Q96PU9 254 aa11.13□□□□□ -0.63
CKS1B-202ENST00000368436 C11orf1Q9H5F2 150 aa11.13□□□□□ -0.63
CKS1B-202ENST00000368436 Q9H8V8 135 aa11.13□□□□□ -0.63
CKS1B-202ENST00000368436 LRP1BQ9NZR2 4599 aa11.13□□□□□ -0.63
CKS1B-202ENST00000368436 TRAV26-1A0A087WT03 109 aa11.12□□□□□ -0.63
CKS1B-202ENST00000368436 TRAV5A0A0B4J249 113 aa11.12□□□□□ -0.63
CKS1B-202ENST00000368436 NPIPB6E9PJ23 425 aa11.12□□□□□ -0.63
CKS1B-202ENST00000368436 L7N2F9 121 aa11.12□□□□□ -0.63
CKS1B-202ENST00000368436 CCSO14618 274 aa11.12□□□□□ -0.63
CKS1B-202ENST00000368436 CT45A10P0DMU9 189 aa11.12□□□□□ -0.63
CKS1B-202ENST00000368436 VAMP2P63027 116 aa11.12□□□□□ -0.63
CKS1B-202ENST00000368436 OR5I1Q13606 314 aa11.12□□□□□ -0.63
CKS1B-202ENST00000368436 RAB31Q13636 194 aa11.12□□□□□ -0.63
CKS1B-202ENST00000368436 Q6ZRG5 221 aa11.12□□□□□ -0.63
CKS1B-202ENST00000368436 NRARPQ7Z6K4 114 aa11.12□□□□□ -0.63
CKS1B-202ENST00000368436 C20orf85Q9H1P6 137 aa11.12□□□□□ -0.63
CKS1B-202ENST00000368436 WDR83OSQ9Y284 106 aa11.12□□□□□ -0.63
CKS1B-202ENST00000368436 GAGE12BA1L429 117 aa11.11□□□□□ -0.63
CKS1B-202ENST00000368436 H3BNG1 76 aa11.11□□□□□ -0.63
CKS1B-202ENST00000368436 PLA2G10O15496 165 aa11.11□□□□□ -0.63
CKS1B-202ENST00000368436 ZNF253O75346 499 aa11.11□□□□□ -0.63
CKS1B-202ENST00000368436 GAGE7O76087 117 aa11.11□□□□□ -0.63
CKS1B-202ENST00000368436 RLN2P04090 185 aa11.11□□□□□ -0.63
CKS1B-202ENST00000368436 GAGE12FP0CL80 117 aa11.11□□□□□ -0.63
CKS1B-202ENST00000368436 GAGE12GP0CL81 117 aa11.11□□□□□ -0.63
CKS1B-202ENST00000368436 GAGE12IP0CL82 117 aa11.11□□□□□ -0.63
CKS1B-202ENST00000368436 VWC2Q2TAL6 325 aa11.11□□□□□ -0.63
CKS1B-202ENST00000368436 MIC13Q5XKP0 118 aa11.11□□□□□ -0.63
CKS1B-202ENST00000368436 OR1L4Q8NGR5 311 aa11.11□□□□□ -0.63
CKS1B-202ENST00000368436 ZNF431Q8TF32 576 aaPredicted RBP11.11□□□□□ -0.63
CKS1B-202ENST00000368436 UPK3BQ9BT76 320 aa11.11□□□□□ -0.63
CKS1B-202ENST00000368436 ZNF586Q9NXT0 402 aa11.11□□□□□ -0.63
CKS1B-202ENST00000368436 LSM5Q9Y4Y9 91 aaKnown RBP11.11□□□□□ -0.63
CKS1B-202ENST00000368436 TRAV12-3A0A0B4J271 114 aa11.1□□□□□ -0.63
CKS1B-202ENST00000368436 SNURFLB1AK76 121 aa11.1□□□□□ -0.63
CKS1B-202ENST00000368436 CST7O76096 145 aa11.1□□□□□ -0.63
CKS1B-202ENST00000368436 LEPP41159 167 aa11.1□□□□□ -0.63
CKS1B-202ENST00000368436 BCAP31P51572 246 aa11.1□□□□□ -0.63
CKS1B-202ENST00000368436 DAZ2Q13117 558 aaKnown RBP11.1□□□□□ -0.63
CKS1B-202ENST00000368436 ZNF846Q147U1 533 aa11.1□□□□□ -0.63
CKS1B-202ENST00000368436 ESRGQ1W209 222 aa11.1□□□□□ -0.63
CKS1B-202ENST00000368436 PYGO2Q9BRQ0 406 aa11.1□□□□□ -0.63
CKS1B-202ENST00000368436 KRTAP1-5Q9BYS1 174 aa11.1□□□□□ -0.63
CKS1B-202ENST00000368436 UQCC1Q9NVA1 299 aa11.1□□□□□ -0.63
CKS1B-202ENST00000368436 A0A0J9YY99 117 aa11.09□□□□□ -0.63
CKS1B-202ENST00000368436 FAM24AA6NFZ4 105 aa11.09□□□□□ -0.63
CKS1B-202ENST00000368436 RPL29P47914 159 aaKnown RBP11.09□□□□□ -0.63
CKS1B-202ENST00000368436 CAV2P51636 162 aa11.09□□□□□ -0.63
CKS1B-202ENST00000368436 MRPL53Q96EL3 112 aaKnown RBP11.09□□□□□ -0.63
CKS1B-202ENST00000368436 PFDN5Q99471 154 aa11.09□□□□□ -0.63
CKS1B-202ENST00000368436 Q9H3A6 140 aa11.09□□□□□ -0.63
CKS1B-202ENST00000368436 J3KRW8 73 aa11.08□□□□□ -0.64
CKS1B-202ENST00000368436 LYRM1O43325 122 aa11.08□□□□□ -0.64
CKS1B-202ENST00000368436 TCRBP04435 133 aa11.08□□□□□ -0.64
CKS1B-202ENST00000368436 TTC32Q5I0X7 151 aa11.08□□□□□ -0.64
CKS1B-202ENST00000368436 CHAC2Q8WUX2 184 aa11.08□□□□□ -0.64
CKS1B-202ENST00000368436 C2orf50Q96LR7 162 aa11.08□□□□□ -0.64
CKS1B-202ENST00000368436 SLC39A9Q9NUM3 307 aa11.08□□□□□ -0.64
CKS1B-202ENST00000368436 TRBV19A0A075B6N1 114 aa11.07□□□□□ -0.64
CKS1B-202ENST00000368436 A0A1W2PPQ1 181 aa11.07□□□□□ -0.64
CKS1B-202ENST00000368436 FAM25EA8MYX2 175 aa11.07□□□□□ -0.64
CKS1B-202ENST00000368436 SLC25A5P05141 298 aaKnown RBP11.07□□□□□ -0.64
CKS1B-202ENST00000368436 IL15RAQ13261 267 aa11.07□□□□□ -0.64
CKS1B-202ENST00000368436 Q6ZTI0 123 aa11.07□□□□□ -0.64
CKS1B-202ENST00000368436 C12orf45Q8N5I9 185 aaPredicted RBP11.07□□□□□ -0.64
CKS1B-202ENST00000368436 FAM19A4Q96LR4 140 aa11.07□□□□□ -0.64
CKS1B-202ENST00000368436 C18orf15Q96N68 181 aa11.07□□□□□ -0.64
CKS1B-202ENST00000368436 LINC00467Q9BRT7 94 aa11.07□□□□□ -0.64
CKS1B-202ENST00000368436 TMPRSS5Q9H3S3 457 aa11.07□□□□□ -0.64
CKS1B-202ENST00000368436 TMEM14CQ9P0S9 112 aa11.07□□□□□ -0.64
CKS1B-202ENST00000368436 MRPS16Q9Y3D3 137 aaKnown RBP11.07□□□□□ -0.64
CKS1B-202ENST00000368436 TRAV6A0A075B6T7 132 aa11.06□□□□□ -0.64
CKS1B-202ENST00000368436 C5orf51A6NDU8 294 aa11.06□□□□□ -0.64
CKS1B-202ENST00000368436 KLLNB2CW77 178 aa11.06□□□□□ -0.64
CKS1B-202ENST00000368436 M0R3E3 92 aa11.06□□□□□ -0.64
CKS1B-202ENST00000368436 ZNF324O75467 553 aaPredicted RBP11.06□□□□□ -0.64
CKS1B-202ENST00000368436 NDUFB4O95168 129 aa11.06□□□□□ -0.64
CKS1B-202ENST00000368436 BTF3P20290 206 aaKnown RBP11.06□□□□□ -0.64
CKS1B-202ENST00000368436 PVALBP20472 110 aaPredicted RBP11.06□□□□□ -0.64
CKS1B-202ENST00000368436 S100A11P31949 105 aa11.06□□□□□ -0.64
CKS1B-202ENST00000368436 SULT1A1P50225 295 aa11.06□□□□□ -0.64
CKS1B-202ENST00000368436 SPATA12Q7Z6I5 190 aa11.06□□□□□ -0.64
CKS1B-202ENST00000368436 C11orf72Q8NBR9 251 aa11.06□□□□□ -0.64
CKS1B-202ENST00000368436 SEC22CQ9BRL7 303 aa11.06□□□□□ -0.64
CKS1B-202ENST00000368436 LYRM2Q9NU23 88 aaPredicted RBP11.06□□□□□ -0.64
CKS1B-202ENST00000368436 PRELID1Q9Y255 219 aa11.06□□□□□ -0.64
CKS1B-202ENST00000368436 UBE2L5PA0A1B0GUS4 154 aa11.05□□□□□ -0.64
CKS1B-202ENST00000368436 IGSF23A1L1A6 192 aa11.05□□□□□ -0.64
CKS1B-202ENST00000368436 C7orf71A4D174 169 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms