RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 RHOBP62745 196 aa16.17■□□□□ 0.18
ECHDC1-203ENST00000368291 ACOT6Q3I5F7 207 aaPredicted RBP16.17■□□□□ 0.18
ECHDC1-203ENST00000368291 EXOC3-AS1Q8N2X6 119 aa16.17■□□□□ 0.18
ECHDC1-203ENST00000368291 RNF141Q8WVD5 230 aa16.17■□□□□ 0.18
ECHDC1-203ENST00000368291 MRPL53Q96EL3 112 aaKnown RBP16.17■□□□□ 0.18
ECHDC1-203ENST00000368291 PSMG3Q9BT73 122 aaPredicted RBP16.17■□□□□ 0.18
ECHDC1-203ENST00000368291 IGHV3OR16-12A0A075B7B8 117 aa16.16■□□□□ 0.18
ECHDC1-203ENST00000368291 OR7C2O60412 319 aa16.16■□□□□ 0.18
ECHDC1-203ENST00000368291 AMBPP02760 352 aa16.16■□□□□ 0.18
ECHDC1-203ENST00000368291 PMS2P11Q13670 270 aa16.16■□□□□ 0.18
ECHDC1-203ENST00000368291 RPL7L1Q6DKI1 246 aaKnown RBP16.16■□□□□ 0.18
ECHDC1-203ENST00000368291 BAP18Q8IXM2 172 aa16.16■□□□□ 0.18
ECHDC1-203ENST00000368291 OR2G3Q8NGZ4 309 aa16.16■□□□□ 0.18
ECHDC1-203ENST00000368291 NANOS2P60321 138 aaKnown RBP16.15■□□□□ 0.18
ECHDC1-203ENST00000368291 PHYHIPLQ96FC7 376 aa16.15■□□□□ 0.18
ECHDC1-203ENST00000368291 SH3BGRL3Q9H299 93 aa16.15■□□□□ 0.18
ECHDC1-203ENST00000368291 TRAV12-2A0A075B6T6 113 aa16.14■□□□□ 0.17
ECHDC1-203ENST00000368291 ARPC5O15511 151 aa16.14■□□□□ 0.17
ECHDC1-203ENST00000368291 KHDC3LQ587J8 217 aa16.14■□□□□ 0.17
ECHDC1-203ENST00000368291 C11orf45Q8TAV5 145 aa16.14■□□□□ 0.17
ECHDC1-203ENST00000368291 PRELID1Q9Y255 219 aa16.14■□□□□ 0.17
ECHDC1-203ENST00000368291 GOLT1BQ9Y3E0 138 aa16.14■□□□□ 0.17
ECHDC1-203ENST00000368291 CXorf65A6NEN9 183 aa16.13■□□□□ 0.17
ECHDC1-203ENST00000368291 SMIM9A6NGZ8 99 aa16.13■□□□□ 0.17
ECHDC1-203ENST00000368291 NPIPB6E9PJ23 425 aa16.13■□□□□ 0.17
ECHDC1-203ENST00000368291 TAS2R45P59539 299 aa16.13■□□□□ 0.17
ECHDC1-203ENST00000368291 ICAM4Q14773 271 aa16.13■□□□□ 0.17
ECHDC1-203ENST00000368291 FAM122CQ6P4D5 195 aa16.13■□□□□ 0.17
ECHDC1-203ENST00000368291 RPP25LQ8N5L8 163 aaKnown RBP16.13■□□□□ 0.17
ECHDC1-203ENST00000368291 OR11H4Q8NGC9 324 aa16.13■□□□□ 0.17
ECHDC1-203ENST00000368291 OR10G4Q8NGN3 311 aa16.13■□□□□ 0.17
ECHDC1-203ENST00000368291 OR10G9Q8NGN4 311 aa16.13■□□□□ 0.17
ECHDC1-203ENST00000368291 OR10G7Q8NGN6 311 aa16.13■□□□□ 0.17
ECHDC1-203ENST00000368291 OR10J6PQ8NGY7 276 aa16.13■□□□□ 0.17
ECHDC1-203ENST00000368291 LYSTQ99698 3801 aa16.13■□□□□ 0.17
ECHDC1-203ENST00000368291 KIR3DS1Q14943 382 aa16.13■□□□□ 0.17
ECHDC1-203ENST00000368291 AAMDCQ9H7C9 122 aa16.13■□□□□ 0.17
ECHDC1-203ENST00000368291 CELA1Q9UNI1 258 aa16.13■□□□□ 0.17
ECHDC1-203ENST00000368291 INSP01308 110 aa16.12■□□□□ 0.17
ECHDC1-203ENST00000368291 CT45A10P0DMU9 189 aa16.12■□□□□ 0.17
ECHDC1-203ENST00000368291 UBE2L3P68036 154 aaKnown RBP16.12■□□□□ 0.17
ECHDC1-203ENST00000368291 SERF2P84101 59 aa16.12■□□□□ 0.17
ECHDC1-203ENST00000368291 CYTL1Q9NRR1 136 aa16.12■□□□□ 0.17
ECHDC1-203ENST00000368291 A0A1W2PPV4 95 aa16.11■□□□□ 0.17
ECHDC1-203ENST00000368291 CDKN1BP46527 198 aa16.11■□□□□ 0.17
ECHDC1-203ENST00000368291 CEMP1Q6PRD7 247 aaPredicted RBP16.11■□□□□ 0.17
ECHDC1-203ENST00000368291 PHLDA1Q8WV24 401 aaPredicted RBP16.11■□□□□ 0.17
ECHDC1-203ENST00000368291 PPP1R14DQ9NXH3 145 aa16.11■□□□□ 0.17
ECHDC1-203ENST00000368291 BORCS7-ASMTA0A0B4J1R7 106 aa16.1■□□□□ 0.17
ECHDC1-203ENST00000368291 HMGB3O15347 200 aaKnown RBP16.1■□□□□ 0.17
ECHDC1-203ENST00000368291 PRM2P04554 102 aa16.1■□□□□ 0.17
ECHDC1-203ENST00000368291 ERCC8Q13216 396 aa16.1■□□□□ 0.17
ECHDC1-203ENST00000368291 Q6ZNX1 250 aa16.1■□□□□ 0.17
ECHDC1-203ENST00000368291 PQLC2Q6ZP29 291 aa16.1■□□□□ 0.17
ECHDC1-203ENST00000368291 SACSQ9NZJ4 4579 aa16.1■□□□□ 0.17
ECHDC1-203ENST00000368291 NUPR2A6NF83 97 aa16.09■□□□□ 0.17
ECHDC1-203ENST00000368291 HBE1P02100 147 aa16.09■□□□□ 0.17
ECHDC1-203ENST00000368291 CDC34P49427 236 aaPredicted RBP16.09■□□□□ 0.17
ECHDC1-203ENST00000368291 RANP62826 216 aaKnown RBP16.09■□□□□ 0.17
ECHDC1-203ENST00000368291 LYPD1Q8N2G4 141 aa16.09■□□□□ 0.17
ECHDC1-203ENST00000368291 GNPNAT1Q96EK6 184 aaPredicted RBP16.09■□□□□ 0.17
ECHDC1-203ENST00000368291 ODF3Q96PU9 254 aa16.09■□□□□ 0.17
ECHDC1-203ENST00000368291 Q9H3A6 140 aa16.09■□□□□ 0.17
ECHDC1-203ENST00000368291 PLECQ15149 4684 aaKnown RBP16.08■□□□□ 0.17
ECHDC1-203ENST00000368291 IGKV2-40A0A087WW87 121 aaPredicted RBP16.08■□□□□ 0.16
ECHDC1-203ENST00000368291 HMSDA8MTL9 139 aa16.08■□□□□ 0.16
ECHDC1-203ENST00000368291 TAAR5O14804 337 aa16.08■□□□□ 0.16
ECHDC1-203ENST00000368291 JTBO76095 146 aa16.08■□□□□ 0.16
ECHDC1-203ENST00000368291 IGKV2D-40P01614 121 aaPredicted RBP16.08■□□□□ 0.16
ECHDC1-203ENST00000368291 STAG3L2P0CL84 134 aa16.08■□□□□ 0.16
ECHDC1-203ENST00000368291 STAG3L3P0CL85 134 aa16.08■□□□□ 0.16
ECHDC1-203ENST00000368291 ZNF345Q14585 488 aa16.08■□□□□ 0.16
ECHDC1-203ENST00000368291 KCNRGQ8N5I3 272 aa16.08■□□□□ 0.16
ECHDC1-203ENST00000368291 RAB24Q969Q5 203 aa16.08■□□□□ 0.16
ECHDC1-203ENST00000368291 ST6GAL2Q96JF0 529 aa16.08■□□□□ 0.16
ECHDC1-203ENST00000368291 TMEM208Q9BTX3 173 aa16.08■□□□□ 0.16
ECHDC1-203ENST00000368291 AGPAT4-IT1Q9H0P7 198 aa16.08■□□□□ 0.16
ECHDC1-203ENST00000368291 DNAH1Q9P2D7 4330 aa16.08■□□□□ 0.16
ECHDC1-203ENST00000368291 ZNF705GA8MUZ8 300 aaPredicted RBP16.07■□□□□ 0.16
ECHDC1-203ENST00000368291 MBP02144 154 aa16.07■□□□□ 0.16
ECHDC1-203ENST00000368291 RRN3P1Q2M238 152 aa16.07■□□□□ 0.16
ECHDC1-203ENST00000368291 C9orf47Q6ZRZ4 202 aa16.07■□□□□ 0.16
ECHDC1-203ENST00000368291 FAM19A4Q96LR4 140 aa16.07■□□□□ 0.16
ECHDC1-203ENST00000368291 LINC00477Q96M19 166 aa16.07■□□□□ 0.16
ECHDC1-203ENST00000368291 LOC102723971A0A1B0GUV8 181 aa16.06■□□□□ 0.16
ECHDC1-203ENST00000368291 TMEM189A5PLL7 270 aa16.06■□□□□ 0.16
ECHDC1-203ENST00000368291 ARL14EPLP0DKL9 152 aa16.06■□□□□ 0.16
ECHDC1-203ENST00000368291 TSPOP30536 169 aa16.06■□□□□ 0.16
ECHDC1-203ENST00000368291 GFI1BQ5VTD9 330 aa16.06■□□□□ 0.16
ECHDC1-203ENST00000368291 SSX7Q7RTT5 188 aa16.06■□□□□ 0.16
ECHDC1-203ENST00000368291 VGLL1Q99990 258 aa16.06■□□□□ 0.16
ECHDC1-203ENST00000368291 ALMS1Q8TCU4 4167 aa16.06■□□□□ 0.16
ECHDC1-203ENST00000368291 EMP1P54849 157 aa16.05■□□□□ 0.16
ECHDC1-203ENST00000368291 C12orf74Q32Q52 190 aa16.05■□□□□ 0.16
ECHDC1-203ENST00000368291 Q6ZTC4 211 aa16.05■□□□□ 0.16
ECHDC1-203ENST00000368291 LCE6AA0A183 80 aa16.04■□□□□ 0.16
ECHDC1-203ENST00000368291 AZU1P20160 251 aa16.04■□□□□ 0.16
ECHDC1-203ENST00000368291 TMEM256Q8N2U0 113 aa16.04■□□□□ 0.16
ECHDC1-203ENST00000368291 SUN5Q8TC36 379 aa16.04■□□□□ 0.16
ECHDC1-203ENST00000368291 DKK2Q9UBU2 259 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms