RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 SIGLEC15Q6ZMC9 328 aa10.71□□□□□ -0.69
PRKN-205ENST00000366897 PRELID3AQ96N28 172 aa10.71□□□□□ -0.69
PRKN-205ENST00000366897 AP1S3Q96PC3 154 aa10.71□□□□□ -0.69
PRKN-205ENST00000366897 CNIH1O95406 144 aa10.71□□□□□ -0.7
PRKN-205ENST00000366897 KIR3DS1Q14943 382 aa10.71□□□□□ -0.7
PRKN-205ENST00000366897 C16orf54Q6UWD8 224 aa10.71□□□□□ -0.7
PRKN-205ENST00000366897 IGKV2-40A0A087WW87 121 aaPredicted RBP10.7□□□□□ -0.7
PRKN-205ENST00000366897 I3L2K1 104 aa10.7□□□□□ -0.7
PRKN-205ENST00000366897 K7EMI3 77 aa10.7□□□□□ -0.7
PRKN-205ENST00000366897 IGKV2D-40P01614 121 aaPredicted RBP10.7□□□□□ -0.7
PRKN-205ENST00000366897 PLP1P60201 277 aa10.7□□□□□ -0.7
PRKN-205ENST00000366897 SMIM15Q7Z3B0 74 aa10.7□□□□□ -0.7
PRKN-205ENST00000366897 LINC00311Q8N616 119 aa10.7□□□□□ -0.7
PRKN-205ENST00000366897 Q8TAT8 98 aa10.7□□□□□ -0.7
PRKN-205ENST00000366897 IGHV1-3A0A0C4DH29 117 aa10.7□□□□□ -0.7
PRKN-205ENST00000366897 K7ERU9 68 aa10.7□□□□□ -0.7
PRKN-205ENST00000366897 GAS8-AS1O95177 125 aa10.7□□□□□ -0.7
PRKN-205ENST00000366897 PSG3Q16557 428 aa10.7□□□□□ -0.7
PRKN-205ENST00000366897 DKK2Q9UBU2 259 aa10.7□□□□□ -0.7
PRKN-205ENST00000366897 IGHV3-23P01764 117 aa10.69□□□□□ -0.7
PRKN-205ENST00000366897 HOXB4P17483 251 aaPredicted RBP10.69□□□□□ -0.7
PRKN-205ENST00000366897 FER1L6-AS1Q8NA97 138 aa10.69□□□□□ -0.7
PRKN-205ENST00000366897 CRYGBP07316 175 aa10.69□□□□□ -0.7
PRKN-205ENST00000366897 TMEM75Q8N9X5 138 aa10.69□□□□□ -0.7
PRKN-205ENST00000366897 CSTL1Q9H114 145 aa10.69□□□□□ -0.7
PRKN-205ENST00000366897 DYNLRB1Q9NP97 96 aa10.69□□□□□ -0.7
PRKN-205ENST00000366897 SPTBN1Q01082 2364 aaKnown RBP10.68□□□□□ -0.7
PRKN-205ENST00000366897 FASNP49327 2511 aaKnown RBP10.68□□□□□ -0.7
PRKN-205ENST00000366897 IGHV3-35A0A0C4DH35 117 aa10.68□□□□□ -0.7
PRKN-205ENST00000366897 NPYP01303 97 aa10.68□□□□□ -0.7
PRKN-205ENST00000366897 SHANK2-AS3Q9BTD1 123 aa10.68□□□□□ -0.7
PRKN-205ENST00000366897 MSRB1Q9NZV6 116 aa10.68□□□□□ -0.7
PRKN-205ENST00000366897 THBDP07204 575 aa10.68□□□□□ -0.7
PRKN-205ENST00000366897 CT45A10P0DMU9 189 aa10.68□□□□□ -0.7
PRKN-205ENST00000366897 APOBEC3AP31941 199 aaPredicted RBP10.68□□□□□ -0.7
PRKN-205ENST00000366897 MRPL51Q4U2R6 128 aaKnown RBP10.68□□□□□ -0.7
PRKN-205ENST00000366897 PVRIGQ6DKI7 326 aa10.68□□□□□ -0.7
PRKN-205ENST00000366897 TMEM14CQ9P0S9 112 aa10.68□□□□□ -0.7
PRKN-205ENST00000366897 A0A0G2JLM5 398 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 K7EIM0 57 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 SH2D1AO60880 128 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 SEC11AP67812 179 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 ZNF491Q8N8L2 437 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 NUP37Q8NFH4 326 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 ZNF414Q96IQ9 312 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 A1L4Q6 167 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 TMEM189A5PLL7 270 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 C9orf118A6NHY6 69 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 C16orf97H3BN30 126 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 HLA-DMBP28068 263 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 UFSP1Q6NVU6 142 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 RNF125Q96EQ8 232 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 COL6A6A6NMZ7 2263 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 ZNF462Q96JM2 2506 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 A0A0G2JNJ9 132 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 K7EQM0 130 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 TNFRSF13BO14836 293 aaPredicted RBP10.67□□□□□ -0.7
PRKN-205ENST00000366897 SMAD7O15105 426 aaKnown RBP10.67□□□□□ -0.7
PRKN-205ENST00000366897 RPS20P60866 119 aaKnown RBP10.67□□□□□ -0.7
PRKN-205ENST00000366897 RBPJQ06330 500 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 FAM104BQ5XKR9 115 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 RPEQ96AT9 228 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 Q9UFV3 132 aa10.67□□□□□ -0.7
PRKN-205ENST00000366897 NPIPB5A8MRT5 1133 aa10.66□□□□□ -0.7
PRKN-205ENST00000366897 H3BRN7 92 aa10.66□□□□□ -0.7
PRKN-205ENST00000366897 PPIFP30405 207 aaKnown RBP10.66□□□□□ -0.7
PRKN-205ENST00000366897 BOD1L2Q8IYS8 172 aa10.66□□□□□ -0.7
PRKN-205ENST00000366897 ORMDL3Q8N138 153 aa10.66□□□□□ -0.7
PRKN-205ENST00000366897 RNASE6Q93091 150 aaKnown RBP10.66□□□□□ -0.7
PRKN-205ENST00000366897 IFI27L1Q96BM0 104 aa10.66□□□□□ -0.7
PRKN-205ENST00000366897 CKS2P33552 79 aa10.66□□□□□ -0.7
PRKN-205ENST00000366897 TWIST1Q15672 202 aa10.66□□□□□ -0.7
PRKN-205ENST00000366897 AKAP6Q13023 2319 aa10.65□□□□□ -0.7
PRKN-205ENST00000366897 BUB1B-PAK6H3BSN5 160 aa10.65□□□□□ -0.7
PRKN-205ENST00000366897 K7ERJ3 54 aa10.65□□□□□ -0.7
PRKN-205ENST00000366897 IGLV1-47P01700 117 aa10.65□□□□□ -0.7
PRKN-205ENST00000366897 EVI2AP22794 236 aa10.65□□□□□ -0.7
PRKN-205ENST00000366897 ZNF80P51504 273 aaPredicted RBP10.65□□□□□ -0.7
PRKN-205ENST00000366897 C3orf36Q3SXR2 165 aa10.65□□□□□ -0.7
PRKN-205ENST00000366897 OR2K2Q8NGT1 345 aa10.65□□□□□ -0.7
PRKN-205ENST00000366897 IGKV2D-26A0A0A0MRZ7 120 aa10.65□□□□□ -0.7
PRKN-205ENST00000366897 A6NDN8 102 aa10.65□□□□□ -0.7
PRKN-205ENST00000366897 FBLL1A6NHQ2 334 aaKnown RBP10.65□□□□□ -0.7
PRKN-205ENST00000366897 HBDP02042 147 aa10.65□□□□□ -0.7
PRKN-205ENST00000366897 EGR2P11161 476 aaPredicted RBP10.65□□□□□ -0.7
PRKN-205ENST00000366897 ZNF843Q8N446 348 aa10.65□□□□□ -0.7
PRKN-205ENST00000366897 H3BRM9 83 aa10.64□□□□□ -0.71
PRKN-205ENST00000366897 TIMM23O14925 209 aa10.64□□□□□ -0.71
PRKN-205ENST00000366897 NDUFS7O75251 213 aa10.64□□□□□ -0.71
PRKN-205ENST00000366897 GATA1P15976 413 aaPredicted RBP10.64□□□□□ -0.71
PRKN-205ENST00000366897 GCSHP23434 173 aa10.64□□□□□ -0.71
PRKN-205ENST00000366897 ADAMTSL5Q6ZMM2 481 aa10.64□□□□□ -0.71
PRKN-205ENST00000366897 GTF2H5Q6ZYL4 71 aa10.64□□□□□ -0.71
PRKN-205ENST00000366897 ANKHD1Q8IWZ3 2542 aaKnown RBP10.64□□□□□ -0.71
PRKN-205ENST00000366897 GOSR1O95249 250 aa10.64□□□□□ -0.71
PRKN-205ENST00000366897 ABHD17AQ96GS6 310 aa10.64□□□□□ -0.71
PRKN-205ENST00000366897 SPCS1Q9Y6A9 102 aa10.64□□□□□ -0.71
PRKN-205ENST00000366897 K7EP34 96 aa10.63□□□□□ -0.71
PRKN-205ENST00000366897 MRPS12O15235 138 aaKnown RBP10.63□□□□□ -0.71
PRKN-205ENST00000366897 LY6HO94772 140 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms