RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 FAM104BQ5XKR9 115 aa9.54□□□□□ -0.88
CDC42BPA-202ENST00000366764 C10orf126Q8N4M7 172 aa9.54□□□□□ -0.88
CDC42BPA-202ENST00000366764 USMG5Q96IX5 58 aa9.54□□□□□ -0.88
CDC42BPA-202ENST00000366764 CCL19Q99731 98 aa9.54□□□□□ -0.88
CDC42BPA-202ENST00000366764 DPH3P1Q9H4G8 78 aa9.54□□□□□ -0.88
CDC42BPA-202ENST00000366764 COX8AP10176 69 aa9.54□□□□□ -0.88
CDC42BPA-202ENST00000366764 IGHV3OR16-13A0A075B7E8 117 aa9.54□□□□□ -0.88
CDC42BPA-202ENST00000366764 IGHV3-74A0A0B4J1X5 117 aa9.54□□□□□ -0.88
CDC42BPA-202ENST00000366764 Q6ZS92 163 aa9.54□□□□□ -0.88
CDC42BPA-202ENST00000366764 ABCA12Q86UK0 2595 aa9.54□□□□□ -0.88
CDC42BPA-202ENST00000366764 TRAV8-1A0A0A6YYK1 113 aa9.54□□□□□ -0.88
CDC42BPA-202ENST00000366764 SIVA1O15304 175 aa9.53□□□□□ -0.88
CDC42BPA-202ENST00000366764 TMEM101Q96IK0 257 aa9.53□□□□□ -0.88
CDC42BPA-202ENST00000366764 TDGF1P13385 188 aa9.53□□□□□ -0.88
CDC42BPA-202ENST00000366764 TRBV19A0A075B6N1 114 aa9.53□□□□□ -0.88
CDC42BPA-202ENST00000366764 IGFL3Q6UXB1 125 aa9.53□□□□□ -0.88
CDC42BPA-202ENST00000366764 PLEKHB2Q96CS7 222 aa9.53□□□□□ -0.88
CDC42BPA-202ENST00000366764 TET2Q6N021 2002 aaPredicted RBP9.53□□□□□ -0.88
CDC42BPA-202ENST00000366764 IGLV3-9A0A075B6K5 115 aa9.53□□□□□ -0.88
CDC42BPA-202ENST00000366764 FAM168AQ92567 244 aa9.53□□□□□ -0.88
CDC42BPA-202ENST00000366764 S4R3C0 116 aa9.53□□□□□ -0.88
CDC42BPA-202ENST00000366764 MEIG1Q5JSS6 88 aa9.53□□□□□ -0.88
CDC42BPA-202ENST00000366764 ZNF114Q8NC26 417 aa9.53□□□□□ -0.88
CDC42BPA-202ENST00000366764 DUX5Q96PT3 197 aa9.53□□□□□ -0.88
CDC42BPA-202ENST00000366764 A0A1B0GUS0 222 aa9.52□□□□□ -0.88
CDC42BPA-202ENST00000366764 SPACA3Q8IXA5 215 aa9.52□□□□□ -0.88
CDC42BPA-202ENST00000366764 FAM223BA6NKX1 122 aa9.52□□□□□ -0.89
CDC42BPA-202ENST00000366764 C17orf58Q2M2W7 97 aa9.52□□□□□ -0.89
CDC42BPA-202ENST00000366764 FAM223AQ8IWN6 122 aa9.52□□□□□ -0.89
CDC42BPA-202ENST00000366764 ADAMTS20P59510 1910 aa9.52□□□□□ -0.89
CDC42BPA-202ENST00000366764 KIR3DL3Q8N743 410 aa9.52□□□□□ -0.89
CDC42BPA-202ENST00000366764 IGKV2-40A0A087WW87 121 aaPredicted RBP9.52□□□□□ -0.89
CDC42BPA-202ENST00000366764 IGHV3-49A0A0A0MS15 119 aa9.52□□□□□ -0.89
CDC42BPA-202ENST00000366764 VCYO14598 125 aa9.52□□□□□ -0.89
CDC42BPA-202ENST00000366764 IGKV2D-40P01614 121 aaPredicted RBP9.52□□□□□ -0.89
CDC42BPA-202ENST00000366764 LGALS9BQ3B8N2 356 aa9.52□□□□□ -0.89
CDC42BPA-202ENST00000366764 LGALS9CQ6DKI2 356 aa9.52□□□□□ -0.89
CDC42BPA-202ENST00000366764 C9orf118A6NHY6 69 aa9.52□□□□□ -0.89
CDC42BPA-202ENST00000366764 CD7P09564 240 aa9.52□□□□□ -0.89
CDC42BPA-202ENST00000366764 K7EMI3 77 aa9.52□□□□□ -0.89
CDC42BPA-202ENST00000366764 BEX4Q9NWD9 120 aaPredicted RBP9.52□□□□□ -0.89
CDC42BPA-202ENST00000366764 C11orf1Q9H5F2 150 aa9.51□□□□□ -0.89
CDC42BPA-202ENST00000366764 KAAG1Q9UBP8 84 aa9.51□□□□□ -0.89
CDC42BPA-202ENST00000366764 ZNF672Q499Z4 452 aaPredicted RBP9.51□□□□□ -0.89
CDC42BPA-202ENST00000366764 FXYD5Q96DB9 178 aa9.51□□□□□ -0.89
CDC42BPA-202ENST00000366764 LINC00479Q96M42 142 aa9.51□□□□□ -0.89
CDC42BPA-202ENST00000366764 SCGB1A1P11684 91 aa9.51□□□□□ -0.89
CDC42BPA-202ENST00000366764 Q6ZR03 302 aa9.51□□□□□ -0.89
CDC42BPA-202ENST00000366764 TRAV41A0A0B4J266 112 aa9.51□□□□□ -0.89
CDC42BPA-202ENST00000366764 CST9LQ9H4G1 147 aa9.51□□□□□ -0.89
CDC42BPA-202ENST00000366764 TRBV20-1A0A075B6N2 111 aa9.51□□□□□ -0.89
CDC42BPA-202ENST00000366764 IGHV3-23P01764 117 aa9.51□□□□□ -0.89
CDC42BPA-202ENST00000366764 ZC2HC1BQ5TFG8 222 aa9.51□□□□□ -0.89
CDC42BPA-202ENST00000366764 LTAP01374 205 aa9.51□□□□□ -0.89
CDC42BPA-202ENST00000366764 ARMS2P0C7Q2 107 aa9.51□□□□□ -0.89
CDC42BPA-202ENST00000366764 PRTN3P24158 256 aa9.51□□□□□ -0.89
CDC42BPA-202ENST00000366764 PKD1L2Q7Z442 2459 aa9.51□□□□□ -0.89
CDC42BPA-202ENST00000366764 TSPAN13O95857 204 aa9.51□□□□□ -0.89
CDC42BPA-202ENST00000366764 CHAC1Q9BUX1 264 aa9.51□□□□□ -0.89
CDC42BPA-202ENST00000366764 NPFFR1Q9GZQ6 430 aa9.51□□□□□ -0.89
CDC42BPA-202ENST00000366764 EVI2AP22794 236 aa9.5□□□□□ -0.89
CDC42BPA-202ENST00000366764 PRDM6Q9NQX0 595 aa9.5□□□□□ -0.89
CDC42BPA-202ENST00000366764 IGHV1-24A0A0C4DH33 117 aa9.5□□□□□ -0.89
CDC42BPA-202ENST00000366764 GHRHP01286 108 aa9.5□□□□□ -0.89
CDC42BPA-202ENST00000366764 PLA2G2EQ9NZK7 142 aa9.5□□□□□ -0.89
CDC42BPA-202ENST00000366764 WT1-ASQ06250 92 aa9.5□□□□□ -0.89
CDC42BPA-202ENST00000366764 AMN1Q8IY45 258 aa9.5□□□□□ -0.89
CDC42BPA-202ENST00000366764 NCR2O95944 276 aa9.49□□□□□ -0.89
CDC42BPA-202ENST00000366764 TAL2Q16559 108 aa9.49□□□□□ -0.89
CDC42BPA-202ENST00000366764 SPANXDQ9BXN6 97 aa9.49□□□□□ -0.89
CDC42BPA-202ENST00000366764 TRAV8-2A0A0B4J237 113 aa9.49□□□□□ -0.89
CDC42BPA-202ENST00000366764 ZFAND6Q6FIF0 208 aa9.49□□□□□ -0.89
CDC42BPA-202ENST00000366764 EMP1P54849 157 aa9.49□□□□□ -0.89
CDC42BPA-202ENST00000366764 LINC00205P59089 165 aa9.49□□□□□ -0.89
CDC42BPA-202ENST00000366764 SRSF2Q01130 221 aaKnown RBP9.49□□□□□ -0.89
CDC42BPA-202ENST00000366764 PEMTQ9UBM1 199 aa9.49□□□□□ -0.89
CDC42BPA-202ENST00000366764 INS-IGF2F8WCM5 200 aa9.49□□□□□ -0.89
CDC42BPA-202ENST00000366764 CRXO43186 299 aaPredicted RBP9.49□□□□□ -0.89
CDC42BPA-202ENST00000366764 MORN3Q6PF18 240 aaPredicted RBP9.49□□□□□ -0.89
CDC42BPA-202ENST00000366764 TMEM158Q8WZ71 300 aa9.49□□□□□ -0.89
CDC42BPA-202ENST00000366764 ERG28Q9UKR5 140 aa9.49□□□□□ -0.89
CDC42BPA-202ENST00000366764 F8W1H4 67 aa9.49□□□□□ -0.89
CDC42BPA-202ENST00000366764 TNFRSF6BO95407 300 aa9.49□□□□□ -0.89
CDC42BPA-202ENST00000366764 LY6EQ16553 131 aa9.49□□□□□ -0.89
CDC42BPA-202ENST00000366764 IGLL1P15814 213 aa9.48□□□□□ -0.89
CDC42BPA-202ENST00000366764 IGHV3-66A0A0C4DH42 116 aa9.48□□□□□ -0.89
CDC42BPA-202ENST00000366764 SHISA9B4DS77 424 aa9.48□□□□□ -0.89
CDC42BPA-202ENST00000366764 CNTFRP26992 372 aa9.48□□□□□ -0.89
CDC42BPA-202ENST00000366764 DUX3Q96PT4 197 aa9.48□□□□□ -0.89
CDC42BPA-202ENST00000366764 K7EN84 100 aa9.48□□□□□ -0.89
CDC42BPA-202ENST00000366764 FN1P02751 2386 aaKnown RBP9.48□□□□□ -0.89
CDC42BPA-202ENST00000366764 Q8N8P6 123 aa9.48□□□□□ -0.89
CDC42BPA-202ENST00000366764 OVOL2Q9BRP0 275 aa9.48□□□□□ -0.89
CDC42BPA-202ENST00000366764 K7EM74 188 aa9.48□□□□□ -0.89
CDC42BPA-202ENST00000366764 A0A0G2JNJ9 132 aa9.48□□□□□ -0.89
CDC42BPA-202ENST00000366764 ZNF134P52741 427 aa9.48□□□□□ -0.89
CDC42BPA-202ENST00000366764 Q9UFV3 132 aa9.48□□□□□ -0.89
CDC42BPA-202ENST00000366764 K7EP34 96 aa9.48□□□□□ -0.89
CDC42BPA-202ENST00000366764 ZNF503-AS2A6NEH8 195 aa9.47□□□□□ -0.89
CDC42BPA-202ENST00000366764 IGHV3OR16-8A0A075B7F1 116 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms