RNA–Protein interactions for RNA: ENST00000360859.10

COL9A1-203, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-203ENST00000360859 A0A1W2PPQ1 181 aa12□□□□□ -0.49
COL9A1-203ENST00000360859 SNURFLB1AK76 121 aa12□□□□□ -0.49
COL9A1-203ENST00000360859 COX7A2P2O60397 106 aa12□□□□□ -0.49
COL9A1-203ENST00000360859 IGLC2P0DOY2 106 aa12□□□□□ -0.49
COL9A1-203ENST00000360859 BTF3P20290 206 aaKnown RBP12□□□□□ -0.49
COL9A1-203ENST00000360859 OPCMLQ14982 345 aa12□□□□□ -0.49
COL9A1-203ENST00000360859 MGST2Q99735 147 aa12□□□□□ -0.49
COL9A1-203ENST00000360859 GGACTQ9BVM4 153 aa12□□□□□ -0.49
COL9A1-203ENST00000360859 TMPRSS5Q9H3S3 457 aa12□□□□□ -0.49
COL9A1-203ENST00000360859 PXMP4Q9Y6I8 212 aa12□□□□□ -0.49
COL9A1-203ENST00000360859 TRAV12-3A0A0B4J271 114 aa11.99□□□□□ -0.49
COL9A1-203ENST00000360859 LINC00854A0A1B0GVQ3 168 aa11.99□□□□□ -0.49
COL9A1-203ENST00000360859 H3BQ15 152 aa11.99□□□□□ -0.49
COL9A1-203ENST00000360859 J3KRW8 73 aa11.99□□□□□ -0.49
COL9A1-203ENST00000360859 CT45A10P0DMU9 189 aa11.99□□□□□ -0.49
COL9A1-203ENST00000360859 C4orf46Q504U0 113 aa11.99□□□□□ -0.49
COL9A1-203ENST00000360859 C10orf113Q5VZT2 155 aa11.99□□□□□ -0.49
COL9A1-203ENST00000360859 SAT2Q96F10 170 aaPredicted RBP11.99□□□□□ -0.49
COL9A1-203ENST00000360859 SRRQ9GZT4 340 aa11.99□□□□□ -0.49
COL9A1-203ENST00000360859 ZNF586Q9NXT0 402 aa11.99□□□□□ -0.49
COL9A1-203ENST00000360859 GSKIPQ9P0R6 139 aa11.99□□□□□ -0.49
COL9A1-203ENST00000360859 APOBP04114 4563 aaKnown RBP11.99□□□□□ -0.49
COL9A1-203ENST00000360859 NAP1L6A6NFF2 107 aa11.98□□□□□ -0.49
COL9A1-203ENST00000360859 LEPP41159 167 aa11.98□□□□□ -0.49
COL9A1-203ENST00000360859 DAZ2Q13117 558 aaKnown RBP11.98□□□□□ -0.49
COL9A1-203ENST00000360859 Q6ZTI0 123 aa11.98□□□□□ -0.49
COL9A1-203ENST00000360859 ODF3Q96PU9 254 aa11.98□□□□□ -0.49
COL9A1-203ENST00000360859 C7orf66A4D0T2 115 aa11.97□□□□□ -0.49
COL9A1-203ENST00000360859 NPIPB6E9PJ23 425 aa11.97□□□□□ -0.49
COL9A1-203ENST00000360859 MBPP02686 304 aaPredicted RBP11.97□□□□□ -0.49
COL9A1-203ENST00000360859 INPP1P49441 399 aa11.97□□□□□ -0.49
COL9A1-203ENST00000360859 BAK1Q16611 211 aa11.97□□□□□ -0.49
COL9A1-203ENST00000360859 SPANXN2Q5MJ10 180 aa11.97□□□□□ -0.49
COL9A1-203ENST00000360859 ZNF431Q8TF32 576 aaPredicted RBP11.97□□□□□ -0.49
COL9A1-203ENST00000360859 VSIG2Q96IQ7 327 aa11.97□□□□□ -0.49
COL9A1-203ENST00000360859 PYGO2Q9BRQ0 406 aa11.97□□□□□ -0.49
COL9A1-203ENST00000360859 DNAH5Q8TE73 4624 aa11.96□□□□□ -0.49
COL9A1-203ENST00000360859 TRAV5A0A0B4J249 113 aa11.96□□□□□ -0.49
COL9A1-203ENST00000360859 DNAJC4Q9NNZ3 241 aa11.96□□□□□ -0.49
COL9A1-203ENST00000360859 A0A096LPF7 62 aa11.95□□□□□ -0.5
COL9A1-203ENST00000360859 CAMLGP49069 296 aa11.95□□□□□ -0.5
COL9A1-203ENST00000360859 LINC00315P59091 139 aa11.95□□□□□ -0.5
COL9A1-203ENST00000360859 GUK1Q16774 197 aa11.95□□□□□ -0.5
COL9A1-203ENST00000360859 TRIQKQ629K1 86 aa11.95□□□□□ -0.5
COL9A1-203ENST00000360859 MITD1Q8WV92 249 aa11.95□□□□□ -0.5
COL9A1-203ENST00000360859 TRGV2A0A075B6R0 118 aa11.94□□□□□ -0.5
COL9A1-203ENST00000360859 CCDC160A6NGH7 325 aa11.94□□□□□ -0.5
COL9A1-203ENST00000360859 BTCP35070 178 aa11.94□□□□□ -0.5
COL9A1-203ENST00000360859 RAB31Q13636 194 aa11.94□□□□□ -0.5
COL9A1-203ENST00000360859 MIC13Q5XKP0 118 aa11.94□□□□□ -0.5
COL9A1-203ENST00000360859 Q6ZRG5 221 aa11.94□□□□□ -0.5
COL9A1-203ENST00000360859 Q6ZRN7 208 aaPredicted RBP11.94□□□□□ -0.5
COL9A1-203ENST00000360859 NRARPQ7Z6K4 114 aa11.94□□□□□ -0.5
COL9A1-203ENST00000360859 C11orf72Q8NBR9 251 aa11.94□□□□□ -0.5
COL9A1-203ENST00000360859 GSN-AS1Q9NRJ2 163 aa11.94□□□□□ -0.5
COL9A1-203ENST00000360859 L7N2F9 121 aa11.93□□□□□ -0.5
COL9A1-203ENST00000360859 SLC25A5P05141 298 aaKnown RBP11.93□□□□□ -0.5
COL9A1-203ENST00000360859 VAMP2P63027 116 aa11.93□□□□□ -0.5
COL9A1-203ENST00000360859 C18orf15Q96N68 181 aa11.93□□□□□ -0.5
COL9A1-203ENST00000360859 TRGV1A0A0A0MS02 117 aa11.92□□□□□ -0.5
COL9A1-203ENST00000360859 C7orf71A4D174 169 aa11.92□□□□□ -0.5
COL9A1-203ENST00000360859 ZNF253O75346 499 aa11.92□□□□□ -0.5
COL9A1-203ENST00000360859 ERCC8Q13216 396 aa11.92□□□□□ -0.5
COL9A1-203ENST00000360859 ZNF680Q8NEM1 530 aa11.92□□□□□ -0.5
COL9A1-203ENST00000360859 OR1L4Q8NGR5 311 aa11.92□□□□□ -0.5
COL9A1-203ENST00000360859 MRPL53Q96EL3 112 aaKnown RBP11.92□□□□□ -0.5
COL9A1-203ENST00000360859 SDHCQ99643 169 aaPredicted RBP11.92□□□□□ -0.5
COL9A1-203ENST00000360859 FUT9Q9Y231 359 aa11.92□□□□□ -0.5
COL9A1-203ENST00000360859 WDR83OSQ9Y284 106 aa11.92□□□□□ -0.5
COL9A1-203ENST00000360859 CENPXA8MT69 81 aa11.91□□□□□ -0.5
COL9A1-203ENST00000360859 KLLNB2CW77 178 aa11.91□□□□□ -0.5
COL9A1-203ENST00000360859 M0R3E3 92 aa11.91□□□□□ -0.5
COL9A1-203ENST00000360859 CCSO14618 274 aa11.91□□□□□ -0.5
COL9A1-203ENST00000360859 ZNF324O75467 553 aaPredicted RBP11.91□□□□□ -0.5
COL9A1-203ENST00000360859 CST7O76096 145 aa11.91□□□□□ -0.5
COL9A1-203ENST00000360859 BCAP31P51572 246 aa11.91□□□□□ -0.5
COL9A1-203ENST00000360859 CD300CQ08708 224 aa11.91□□□□□ -0.5
COL9A1-203ENST00000360859 PFDN5Q99471 154 aa11.91□□□□□ -0.5
COL9A1-203ENST00000360859 LINC00467Q9BRT7 94 aa11.91□□□□□ -0.5
COL9A1-203ENST00000360859 LSM5Q9Y4Y9 91 aaKnown RBP11.91□□□□□ -0.5
COL9A1-203ENST00000360859 TRBV19A0A075B6N1 114 aa11.9□□□□□ -0.5
COL9A1-203ENST00000360859 SIVA1O15304 175 aa11.9□□□□□ -0.5
COL9A1-203ENST00000360859 CAV2P51636 162 aa11.9□□□□□ -0.5
COL9A1-203ENST00000360859 BTN1A1Q13410 526 aa11.9□□□□□ -0.5
COL9A1-203ENST00000360859 ZNF846Q147U1 533 aa11.9□□□□□ -0.5
COL9A1-203ENST00000360859 ANXA2RQ3ZCQ2 193 aa11.9□□□□□ -0.5
COL9A1-203ENST00000360859 FAM19A4Q96LR4 140 aa11.9□□□□□ -0.5
COL9A1-203ENST00000360859 UQCC1Q9NVA1 299 aa11.9□□□□□ -0.5
COL9A1-203ENST00000360859 KLF12Q9Y4X4 402 aa11.9□□□□□ -0.5
COL9A1-203ENST00000360859 SPINK4O60575 86 aa11.89□□□□□ -0.51
COL9A1-203ENST00000360859 NDUFB4O95168 129 aa11.89□□□□□ -0.51
COL9A1-203ENST00000360859 RNASE4P34096 147 aaKnown RBP11.89□□□□□ -0.51
COL9A1-203ENST00000360859 FUSP35637 526 aaKnown RBP eCLIP11.89□□□□□ -0.51
COL9A1-203ENST00000360859 VWC2Q2TAL6 325 aa11.89□□□□□ -0.51
COL9A1-203ENST00000360859 C12orf45Q8N5I9 185 aaPredicted RBP11.89□□□□□ -0.51
COL9A1-203ENST00000360859 EIF4E3Q8N5X7 224 aaKnown RBP11.89□□□□□ -0.51
COL9A1-203ENST00000360859 LINC00477Q96M19 166 aa11.89□□□□□ -0.51
COL9A1-203ENST00000360859 AGPAT4-IT1Q9H0P7 198 aa11.89□□□□□ -0.51
COL9A1-203ENST00000360859 RBM38Q9H0Z9 239 aaKnown RBP11.89□□□□□ -0.51
COL9A1-203ENST00000360859 C11orf1Q9H5F2 150 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms