RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 GEMIN7Q9H840 131 aaKnown RBP13.05□□□□□ -0.32
SCAF1-201ENST00000360565 ERCC8Q13216 396 aa13.05□□□□□ -0.32
SCAF1-201ENST00000360565 SMIM27A0A1W2PRY6 76 aa13.04□□□□□ -0.32
SCAF1-201ENST00000360565 IGLC7A0M8Q6 106 aa13.04□□□□□ -0.32
SCAF1-201ENST00000360565 OVOL1O14753 267 aa13.04□□□□□ -0.32
SCAF1-201ENST00000360565 APOMO95445 188 aa13.04□□□□□ -0.32
SCAF1-201ENST00000360565 PLA2G5P39877 138 aa13.04□□□□□ -0.32
SCAF1-201ENST00000360565 TDGF1P3P51864 188 aa13.04□□□□□ -0.32
SCAF1-201ENST00000360565 GUSBP1Q15486 140 aa13.04□□□□□ -0.32
SCAF1-201ENST00000360565 ORAOV1Q8WV07 137 aa13.04□□□□□ -0.32
SCAF1-201ENST00000360565 SONP18583 2426 aaKnown RBP13.04□□□□□ -0.32
SCAF1-201ENST00000360565 CT83Q5H943 113 aa13.04□□□□□ -0.32
SCAF1-201ENST00000360565 THAP8Q8NA92 274 aa13.04□□□□□ -0.32
SCAF1-201ENST00000360565 OR4X2Q8NGF9 303 aa13.04□□□□□ -0.32
SCAF1-201ENST00000360565 MRPL16Q9NX20 251 aaKnown RBP13.04□□□□□ -0.32
SCAF1-201ENST00000360565 TNFRSF18Q9Y5U5 241 aa13.04□□□□□ -0.32
SCAF1-201ENST00000360565 ITLN2Q8WWU7 325 aaPredicted RBP13.04□□□□□ -0.32
SCAF1-201ENST00000360565 JMJD8Q96S16 334 aa13.04□□□□□ -0.32
SCAF1-201ENST00000360565 FAM231BA6NCW3 169 aa13.04□□□□□ -0.32
SCAF1-201ENST00000360565 G3V318 75 aa13.04□□□□□ -0.32
SCAF1-201ENST00000360565 H7C1H1 209 aa13.04□□□□□ -0.32
SCAF1-201ENST00000360565 RRN3P1Q2M238 152 aa13.04□□□□□ -0.32
SCAF1-201ENST00000360565 NAA38Q9BRA0 125 aaKnown RBP13.04□□□□□ -0.32
SCAF1-201ENST00000360565 ATP6V0E1O15342 81 aa13.03□□□□□ -0.32
SCAF1-201ENST00000360565 DUX3Q96PT4 197 aa13.03□□□□□ -0.32
SCAF1-201ENST00000360565 C2CD3Q4AC94 2353 aa13.03□□□□□ -0.32
SCAF1-201ENST00000360565 C22orf46C9J442 243 aa13.03□□□□□ -0.32
SCAF1-201ENST00000360565 IGKCP01834 107 aa13.03□□□□□ -0.32
SCAF1-201ENST00000360565 COX6CP09669 75 aa13.03□□□□□ -0.32
SCAF1-201ENST00000360565 ODF3L1Q8IXM7 274 aa13.03□□□□□ -0.32
SCAF1-201ENST00000360565 RCHY1Q96PM5 261 aa13.03□□□□□ -0.32
SCAF1-201ENST00000360565 TRBV7-1A0A0A6YYK4 115 aa13.03□□□□□ -0.32
SCAF1-201ENST00000360565 PSMB11A5LHX3 300 aa13.03□□□□□ -0.32
SCAF1-201ENST00000360565 SMAD7O15105 426 aaKnown RBP13.03□□□□□ -0.32
SCAF1-201ENST00000360565 COA6Q5JTJ3 125 aaKnown RBP13.03□□□□□ -0.32
SCAF1-201ENST00000360565 C9orf139Q6ZV77 190 aa13.03□□□□□ -0.32
SCAF1-201ENST00000360565 C8orf49Q96NF6 230 aa13.03□□□□□ -0.32
SCAF1-201ENST00000360565 SNCGO76070 127 aa13.02□□□□□ -0.32
SCAF1-201ENST00000360565 GRNP28799 593 aaKnown RBP13.02□□□□□ -0.32
SCAF1-201ENST00000360565 ORMDL2Q53FV1 153 aa13.02□□□□□ -0.32
SCAF1-201ENST00000360565 DEFB104AQ8WTQ1 72 aa13.02□□□□□ -0.32
SCAF1-201ENST00000360565 CCDC168Q8NDH2 2452 aa13.02□□□□□ -0.32
SCAF1-201ENST00000360565 BEX4Q9NWD9 120 aaPredicted RBP13.02□□□□□ -0.32
SCAF1-201ENST00000360565 PTPRSQ13332 1948 aa13.02□□□□□ -0.33
SCAF1-201ENST00000360565 SHISA9B4DS77 424 aa13.02□□□□□ -0.33
SCAF1-201ENST00000360565 PROP1O75360 226 aa13.02□□□□□ -0.33
SCAF1-201ENST00000360565 ZNF688P0C7X2 276 aa13.02□□□□□ -0.33
SCAF1-201ENST00000360565 C19orf54Q5BKX5 351 aa13.02□□□□□ -0.33
SCAF1-201ENST00000360565 MORN5Q5VZ52 161 aa13.02□□□□□ -0.33
SCAF1-201ENST00000360565 CYSLTR1Q9Y271 337 aa13.02□□□□□ -0.33
SCAF1-201ENST00000360565 SAMD13Q5VXD3 122 aa13.02□□□□□ -0.33
SCAF1-201ENST00000360565 SFTA2Q6UW10 78 aa13.02□□□□□ -0.33
SCAF1-201ENST00000360565 GTSCR1Q86UQ5 136 aa13.02□□□□□ -0.33
SCAF1-201ENST00000360565 RNF182Q8N6D2 247 aa13.02□□□□□ -0.33
SCAF1-201ENST00000360565 PRSS22Q9GZN4 317 aa13.02□□□□□ -0.33
SCAF1-201ENST00000360565 LDLRAD2Q5SZI1 272 aa13.01□□□□□ -0.33
SCAF1-201ENST00000360565 TMEM75Q8N9X5 138 aa13.01□□□□□ -0.33
SCAF1-201ENST00000360565 UBE2E1P51965 193 aa13□□□□□ -0.33
SCAF1-201ENST00000360565 SEC11AP67812 179 aa13□□□□□ -0.33
SCAF1-201ENST00000360565 LAGE3Q14657 143 aa13□□□□□ -0.33
SCAF1-201ENST00000360565 IGLC2P0DOY2 106 aa13□□□□□ -0.33
SCAF1-201ENST00000360565 IGLC3P0DOY3 106 aa13□□□□□ -0.33
SCAF1-201ENST00000360565 ZNF295-AS1Q8N0V1 137 aa13□□□□□ -0.33
SCAF1-201ENST00000360565 IGFBPL1Q8WX77 278 aa13□□□□□ -0.33
SCAF1-201ENST00000360565 KMT2EQ8IZD2 1858 aa13□□□□□ -0.33
SCAF1-201ENST00000360565 IGKV3OR2-268A0A0C4DH90 116 aa13□□□□□ -0.33
SCAF1-201ENST00000360565 CRXO43186 299 aaPredicted RBP13□□□□□ -0.33
SCAF1-201ENST00000360565 HSD52Q0P140 79 aa13□□□□□ -0.33
SCAF1-201ENST00000360565 OR2K2Q8NGT1 345 aa13□□□□□ -0.33
SCAF1-201ENST00000360565 IGKV1OR2-108A0A075B7D4 117 aa12.99□□□□□ -0.33
SCAF1-201ENST00000360565 SMAGPQ0VAQ4 97 aa12.99□□□□□ -0.33
SCAF1-201ENST00000360565 RUSC1-AS1Q66K80 236 aa12.99□□□□□ -0.33
SCAF1-201ENST00000360565 C17orf77Q96MU5 243 aa12.99□□□□□ -0.33
SCAF1-201ENST00000360565 NUPR1O60356 82 aa12.99□□□□□ -0.33
SCAF1-201ENST00000360565 TMEM158Q8WZ71 300 aa12.99□□□□□ -0.33
SCAF1-201ENST00000360565 CHD3Q12873 2000 aaKnown RBP12.99□□□□□ -0.33
SCAF1-201ENST00000360565 UBE2L6O14933 153 aa12.99□□□□□ -0.33
SCAF1-201ENST00000360565 BRWD1-AS2P59051 145 aa12.99□□□□□ -0.33
SCAF1-201ENST00000360565 C14orf178Q8N769 122 aaPredicted RBP12.99□□□□□ -0.33
SCAF1-201ENST00000360565 ZNF491Q8N8L2 437 aa12.99□□□□□ -0.33
SCAF1-201ENST00000360565 LINC01587Q99440 93 aa12.99□□□□□ -0.33
SCAF1-201ENST00000360565 TMEM14CQ9P0S9 112 aa12.99□□□□□ -0.33
SCAF1-201ENST00000360565 NDUFS7O75251 213 aa12.99□□□□□ -0.33
SCAF1-201ENST00000360565 STPG4Q8N801 248 aa12.99□□□□□ -0.33
SCAF1-201ENST00000360565 OR9G4Q8NGQ1 327 aa12.99□□□□□ -0.33
SCAF1-201ENST00000360565 A0A1B0GWB2 263 aa12.98□□□□□ -0.33
SCAF1-201ENST00000360565 H3BRN7 92 aa12.98□□□□□ -0.33
SCAF1-201ENST00000360565 FCN3O75636 299 aa12.98□□□□□ -0.33
SCAF1-201ENST00000360565 TEX29Q8N6K0 151 aa12.98□□□□□ -0.33
SCAF1-201ENST00000360565 FAM110DQ8TAY7 271 aaPredicted RBP12.98□□□□□ -0.33
SCAF1-201ENST00000360565 ZC2HC1AQ96GY0 325 aa12.98□□□□□ -0.33
SCAF1-201ENST00000360565 SUMO2P61956 95 aaKnown RBP12.98□□□□□ -0.33
SCAF1-201ENST00000360565 ZC2HC1BQ5TFG8 222 aa12.98□□□□□ -0.33
SCAF1-201ENST00000360565 FAM104BQ5XKR9 115 aa12.98□□□□□ -0.33
SCAF1-201ENST00000360565 PRSS33Q8NF86 280 aa12.98□□□□□ -0.33
SCAF1-201ENST00000360565 PRR25Q96S07 402 aa12.98□□□□□ -0.33
SCAF1-201ENST00000360565 CHTOPQ9Y3Y2 248 aaKnown RBP12.98□□□□□ -0.33
SCAF1-201ENST00000360565 B4DSR2 109 aa12.98□□□□□ -0.33
SCAF1-201ENST00000360565 CD300EQ496F6 205 aaPredicted RBP12.98□□□□□ -0.33
SCAF1-201ENST00000360565 RITA1Q96K30 269 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms