RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 NPSP0C0P6 89 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 GZMBP10144 247 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 HIST1H2BOP23527 126 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 HIST1H2BBP33778 126 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 RPS10P46783 165 aaKnown RBP4.8□□□□□ -1.64
SUDS3-201ENST00000360286 RPL29P47914 159 aaKnown RBP4.8□□□□□ -1.64
SUDS3-201ENST00000360286 CEBPGP53567 150 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 HIST1H2BDP58876 126 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 HIST1H2BCP62807 126 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 HIST2H2BEQ16778 126 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 GCSAMLQ5JQS6 135 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.8□□□□□ -1.64
SUDS3-201ENST00000360286 TMEM183AQ8IXX5 376 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 DEFB125Q8N687 156 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 MRAPQ8TCY5 172 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 SCGB1C1Q8TD33 95 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 ORAOV1Q8WV07 137 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 TMEM37Q8WXS4 190 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 HIST1H2BHQ93079 126 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 UHRF2Q96PU4 802 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 HIST1H2BNQ99877 126 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 HIST1H2BMQ99879 126 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 HIST1H2BLQ99880 126 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 RSG1Q9BU20 258 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 NPCDR1Q9BY65 106 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 SLC25A39Q9BZJ4 359 aaPredicted RBP4.8□□□□□ -1.64
SUDS3-201ENST00000360286 WFDC10AQ9H1F0 79 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 SLC35B3Q9H1N7 401 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 ARV1Q9H2C2 271 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 MS4A6AQ9H2W1 248 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 TMEM231Q9H6L2 316 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 SLC25A22Q9H936 323 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 DNAJC4Q9NNZ3 241 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 SLC39A9Q9NUM3 307 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 HIGD1AQ9Y241 93 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 PXMP4Q9Y6I8 212 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 SMAD5-AS1Q9Y6J3 95 aa4.8□□□□□ -1.64
SUDS3-201ENST00000360286 TRAV5A0A0B4J249 113 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 KIR2DL5BA0A0G2JN68 375 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 KIR2DL5BA0A0G2JPC4 375 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 H3BRN7 92 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 M0R036 132 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 COX7A2P2O60397 106 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 MPDU1O75352 247 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 PAFAH1B2P68402 229 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 COL5A1-AS1Q5SY13 56 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 MORN5Q5VZ52 161 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 C10orf113Q5VZT2 155 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 RPL7L1Q6DKI1 246 aaKnown RBP4.79□□□□□ -1.64
SUDS3-201ENST00000360286 CDPF1Q6NVV7 123 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 SIGLEC15Q6ZMC9 328 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 Q6ZRG5 221 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 SSX7Q7RTT5 188 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 LINC00305Q7Z4B0 112 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 OR8I2Q8N0Y5 310 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 KIR2DL5AQ8N109 375 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 ZNF709Q8N972 641 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 STXBP6Q8NFX7 210 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 GRAMD2BQ96HH9 432 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 C17orf77Q96MU5 243 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 SPAG8Q99932 426 aaPredicted RBP4.79□□□□□ -1.64
SUDS3-201ENST00000360286 SHANK2-AS3Q9BTD1 123 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 SCRT1Q9BWW7 348 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 HRH4Q9H3N8 390 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 C19orf73Q9NVV2 129 aa4.79□□□□□ -1.64
SUDS3-201ENST00000360286 AGRNO00468 2067 aa4.78□□□□□ -1.64
SUDS3-201ENST00000360286 C20orf202A1L168 122 aa4.78□□□□□ -1.64
SUDS3-201ENST00000360286 HELTA6NFD8 242 aa4.78□□□□□ -1.64
SUDS3-201ENST00000360286 OR4C46A6NHA9 309 aa4.78□□□□□ -1.64
SUDS3-201ENST00000360286 OR11H12B2RN74 326 aa4.78□□□□□ -1.64
SUDS3-201ENST00000360286 TMEM238C9JI98 176 aa4.78□□□□□ -1.64
SUDS3-201ENST00000360286 C17orf112F2Z3M2 114 aa4.78□□□□□ -1.64
SUDS3-201ENST00000360286 K7EQG2 157 aa4.78□□□□□ -1.64
SUDS3-201ENST00000360286 JTBO76095 146 aa4.78□□□□□ -1.64
SUDS3-201ENST00000360286 SNRPCP09234 159 aaKnown RBP4.78□□□□□ -1.64
SUDS3-201ENST00000360286 FABP4P15090 132 aa4.78□□□□□ -1.64
SUDS3-201ENST00000360286 ZNF674Q2M3X9 581 aa4.78□□□□□ -1.64
SUDS3-201ENST00000360286 ODF3L2Q3SX64 289 aa4.78□□□□□ -1.64
SUDS3-201ENST00000360286 FFAR4Q5NUL3 377 aa4.78□□□□□ -1.64
SUDS3-201ENST00000360286 SPATA31B1PQ5VZV4 182 aa4.78□□□□□ -1.64
SUDS3-201ENST00000360286 GTSCR1Q86UQ5 136 aa4.78□□□□□ -1.64
SUDS3-201ENST00000360286 APRG1Q8IVJ8 170 aa4.78□□□□□ -1.64
SUDS3-201ENST00000360286 OR1L4Q8NGR5 311 aa4.78□□□□□ -1.64
SUDS3-201ENST00000360286 DCANP1Q8TF63 244 aa4.78□□□□□ -1.64
SUDS3-201ENST00000360286 TMED6Q8WW62 240 aa4.78□□□□□ -1.64
SUDS3-201ENST00000360286 C20orf144Q9BQM9 153 aa4.78□□□□□ -1.64
SUDS3-201ENST00000360286 ATG101Q9BSB4 218 aa4.78□□□□□ -1.64
SUDS3-201ENST00000360286 PARD6GQ9BYG4 376 aaPredicted RBP4.78□□□□□ -1.64
SUDS3-201ENST00000360286 HUWE1Q7Z6Z7 4374 aaKnown RBP4.78□□□□□ -1.64
SUDS3-201ENST00000360286 TRBV24-1A0A075B6N3 115 aa4.77□□□□□ -1.65
SUDS3-201ENST00000360286 TRAV2A0A0B4J234 112 aa4.77□□□□□ -1.65
SUDS3-201ENST00000360286 UMAD1C9J7I0 102 aa4.77□□□□□ -1.65
SUDS3-201ENST00000360286 MRPS12O15235 138 aaKnown RBP4.77□□□□□ -1.65
SUDS3-201ENST00000360286 ZNF688P0C7X2 276 aa4.77□□□□□ -1.65
SUDS3-201ENST00000360286 IGHV4-30-4P0DP06 118 aa4.77□□□□□ -1.65
SUDS3-201ENST00000360286 ATP6V0CP27449 155 aa4.77□□□□□ -1.65
SUDS3-201ENST00000360286 DEFB131AP59861 70 aa4.77□□□□□ -1.65
SUDS3-201ENST00000360286 DEFB1P60022 68 aa4.77□□□□□ -1.65
SUDS3-201ENST00000360286 ZNF266Q14584 549 aa4.77□□□□□ -1.65
SUDS3-201ENST00000360286 ELOBQ15370 118 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms