RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 FOXF2Q12947 444 aa7.9□□□□□ -1.14
CUX1-203ENST00000360264 A0A0G2JNJ9 132 aa7.9□□□□□ -1.14
CUX1-203ENST00000360264 LIME1Q9H400 295 aa7.9□□□□□ -1.14
CUX1-203ENST00000360264 Q9UFV3 132 aa7.9□□□□□ -1.14
CUX1-203ENST00000360264 SSBP2P81877 361 aaPredicted RBP7.9□□□□□ -1.15
CUX1-203ENST00000360264 TMEM75Q8N9X5 138 aa7.9□□□□□ -1.15
CUX1-203ENST00000360264 SH2D1AO60880 128 aa7.9□□□□□ -1.15
CUX1-203ENST00000360264 BPESC1Q9GZL8 116 aa7.9□□□□□ -1.15
CUX1-203ENST00000360264 HIST1H2BKO60814 126 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 HIST1H2BJP06899 126 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 CD59P13987 128 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 HIST1H2BOP23527 126 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 HIST1H2BBP33778 126 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 HIST1H2BDP58876 126 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 HIST1H2BCP62807 126 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 HIST2H2BEQ16778 126 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.89□□□□□ -1.15
CUX1-203ENST00000360264 HIST1H2BHQ93079 126 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 HIST1H2BNQ99877 126 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 HIST1H2BMQ99879 126 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 Q6ZS49 121 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 TMEM14EPQ6UXP3 125 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 EXOC3-AS1Q8N2X6 119 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 TMEM243Q9BU79 118 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 SHANK2-AS3Q9BTD1 123 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 MDS2Q8NDY4 140 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 RHPN1-AS1Q9BWJ2 59 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 CD24P25063 80 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 C22orf46C9J442 243 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 BPTFQ12830 3046 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 C1QCP02747 245 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 ESDP10768 282 aa7.89□□□□□ -1.15
CUX1-203ENST00000360264 SCRT1Q9BWW7 348 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 LDLRAD4O15165 306 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 MLNRO43193 412 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 EXPH5Q8NEV8 1989 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 LINC01619G3V211 115 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 DEFB130BP0DP73 79 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 DEFB130AP0DP74 79 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 YPEL3P61236 119 aaPredicted RBP7.88□□□□□ -1.15
CUX1-203ENST00000360264 FLVCR1-AS1Q8TAF5 88 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 NABP1Q96AH0 204 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 NCOR1P1Q9H4R4 102 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 ATG2AQ2TAZ0 1938 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 H3BQ85 93 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 NDUFA4O00483 81 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 PFN1P07737 140 aaKnown RBP7.88□□□□□ -1.15
CUX1-203ENST00000360264 CGB7P0DN87 165 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 Q8TCH9 128 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 CGB3P0DN86 165 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 UBE2WQ96B02 151 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 SPANXCQ9NY87 97 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 TRAV13-1A0A0B4J241 112 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 SELLP14151 372 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 DSCR8Q96T75 97 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 ZNF319Q9P2F9 582 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 H3BUA1 57 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 WFDC1Q9HC57 220 aa7.88□□□□□ -1.15
CUX1-203ENST00000360264 GGNQ86UU5 652 aa7.87□□□□□ -1.15
CUX1-203ENST00000360264 TMEM14BQ9NUH8 114 aa7.87□□□□□ -1.15
CUX1-203ENST00000360264 UBE2E1P51965 193 aa7.87□□□□□ -1.15
CUX1-203ENST00000360264 ZNF474Q6S9Z5 364 aaPredicted RBP7.87□□□□□ -1.15
CUX1-203ENST00000360264 RNF126Q9BV68 326 aa7.87□□□□□ -1.15
CUX1-203ENST00000360264 CD5LO43866 347 aa7.87□□□□□ -1.15
CUX1-203ENST00000360264 IGHV1-69DA0A0B4J2H0 117 aa7.87□□□□□ -1.15
CUX1-203ENST00000360264 IGHV1-69P01742 117 aa7.87□□□□□ -1.15
CUX1-203ENST00000360264 C11orf44Q8N8P7 122 aa7.87□□□□□ -1.15
CUX1-203ENST00000360264 K7ENP7 123 aa7.87□□□□□ -1.15
CUX1-203ENST00000360264 Q6P435 159 aa7.87□□□□□ -1.15
CUX1-203ENST00000360264 TGFBR3LH3BV60 316 aa7.87□□□□□ -1.15
CUX1-203ENST00000360264 HGFACQ04756 655 aa7.87□□□□□ -1.15
CUX1-203ENST00000360264 ZMAT4Q9H898 229 aa7.87□□□□□ -1.15
CUX1-203ENST00000360264 TEX48A0A1B0GUV7 120 aa7.87□□□□□ -1.15
CUX1-203ENST00000360264 PPIFP30405 207 aaKnown RBP7.87□□□□□ -1.15
CUX1-203ENST00000360264 BTCP35070 178 aa7.87□□□□□ -1.15
CUX1-203ENST00000360264 Q86TA4 180 aa7.87□□□□□ -1.15
CUX1-203ENST00000360264 MMP23AO75900 390 aa7.87□□□□□ -1.15
CUX1-203ENST00000360264 CD177Q8N6Q3 437 aa7.87□□□□□ -1.15
CUX1-203ENST00000360264 VWCEQ96DN2 955 aa7.87□□□□□ -1.15
CUX1-203ENST00000360264 LINC01551Q86U37 167 aa7.87□□□□□ -1.15
CUX1-203ENST00000360264 CFPP27918 469 aa7.87□□□□□ -1.15
CUX1-203ENST00000360264 IGHV2-70DA0A0C4DH43 119 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 J3QRE1 110 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 IGHG3P01860 377 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 KLRD1Q13241 179 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 LY6G6FQ5SQ64 297 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 SHISA3A0PJX4 238 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 TRBV20-1A0A075B6N2 111 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 UBL5Q9BZL1 73 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 DEFB131AP59861 70 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 TMEM256Q8N2U0 113 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 UBE2E2Q96LR5 201 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 IGKV1-12A0A0C4DH73 117 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 IGKV1D-12P01611 117 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 PMVKQ15126 192 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 Q6ZS92 163 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 HIST3H2BBQ8N257 126 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 STPG4Q8N801 248 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 ALPK3Q96L96 1907 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 PINLYPA6NC86 204 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 1660.6 ms