RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 PRELID1Q9Y255 219 aa9.22□□□□□ -0.93
NIF3L1-201ENST00000359683 PGPA6NDG6 321 aa9.21□□□□□ -0.93
NIF3L1-201ENST00000359683 FAM74A7A6NL05 159 aa9.21□□□□□ -0.93
NIF3L1-201ENST00000359683 OR11H12B2RN74 326 aa9.21□□□□□ -0.93
NIF3L1-201ENST00000359683 ICAM4Q14773 271 aa9.21□□□□□ -0.93
NIF3L1-201ENST00000359683 MRPL53Q96EL3 112 aaKnown RBP9.21□□□□□ -0.93
NIF3L1-201ENST00000359683 YTHDF2Q9Y5A9 579 aaKnown RBP9.21□□□□□ -0.93
NIF3L1-201ENST00000359683 ARL2-SNX15V9GYD0 113 aa9.21□□□□□ -0.93
NIF3L1-201ENST00000359683 ARL6IP6Q8N6S5 226 aa9.2□□□□□ -0.94
NIF3L1-201ENST00000359683 PCNPQ8WW12 178 aaKnown RBP9.2□□□□□ -0.94
NIF3L1-201ENST00000359683 NKX6-2Q9C056 277 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-201ENST00000359683 ZNF705FA8MVS1 300 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-201ENST00000359683 M0R3E3 92 aa9.2□□□□□ -0.94
NIF3L1-201ENST00000359683 PAGE4O60829 102 aa9.2□□□□□ -0.94
NIF3L1-201ENST00000359683 UBE2G2P60604 165 aa9.2□□□□□ -0.94
NIF3L1-201ENST00000359683 SUMO1P63165 101 aaKnown RBP9.2□□□□□ -0.94
NIF3L1-201ENST00000359683 MANBALQ9NQG1 85 aa9.2□□□□□ -0.94
NIF3L1-201ENST00000359683 GNG13Q9P2W3 67 aa9.2□□□□□ -0.94
NIF3L1-201ENST00000359683 GGTLC3B5MD39 225 aa9.19□□□□□ -0.94
NIF3L1-201ENST00000359683 RGS13O14921 159 aa9.19□□□□□ -0.94
NIF3L1-201ENST00000359683 RAB14P61106 215 aa9.19□□□□□ -0.94
NIF3L1-201ENST00000359683 ZNF124Q15973 351 aa9.19□□□□□ -0.94
NIF3L1-201ENST00000359683 APRG1Q8IVJ8 170 aa9.19□□□□□ -0.94
NIF3L1-201ENST00000359683 CCDC28AQ8IWP9 274 aa9.19□□□□□ -0.94
NIF3L1-201ENST00000359683 ZNF738Q8NE65 137 aa9.19□□□□□ -0.94
NIF3L1-201ENST00000359683 RXFP4Q8TDU9 374 aa9.19□□□□□ -0.94
NIF3L1-201ENST00000359683 RPUSD4Q96CM3 377 aaKnown RBP9.19□□□□□ -0.94
NIF3L1-201ENST00000359683 DNAH3Q8TD57 4116 aa9.18□□□□□ -0.94
NIF3L1-201ENST00000359683 PRAC2D3DTV9 90 aa9.18□□□□□ -0.94
NIF3L1-201ENST00000359683 DEFB1P60022 68 aa9.18□□□□□ -0.94
NIF3L1-201ENST00000359683 CLLU1Q5K131 121 aa9.18□□□□□ -0.94
NIF3L1-201ENST00000359683 FOXI2Q6ZQN5 318 aa9.18□□□□□ -0.94
NIF3L1-201ENST00000359683 DEFB125Q8N687 156 aa9.18□□□□□ -0.94
NIF3L1-201ENST00000359683 WFDC10AQ9H1F0 79 aa9.18□□□□□ -0.94
NIF3L1-201ENST00000359683 SAV1Q9H4B6 383 aaPredicted RBP9.18□□□□□ -0.94
NIF3L1-201ENST00000359683 AURKAIP1Q9NWT8 199 aaPredicted RBP9.18□□□□□ -0.94
NIF3L1-201ENST00000359683 A0A0J9YX75 114 aa9.17□□□□□ -0.94
NIF3L1-201ENST00000359683 KNCNA6PVL3 124 aa9.17□□□□□ -0.94
NIF3L1-201ENST00000359683 F6UB75 175 aa9.17□□□□□ -0.94
NIF3L1-201ENST00000359683 CSN1S1P47710 185 aa9.17□□□□□ -0.94
NIF3L1-201ENST00000359683 GDF5OSQ5U4N7 250 aa9.17□□□□□ -0.94
NIF3L1-201ENST00000359683 CST9LP1Q5W188 147 aa9.17□□□□□ -0.94
NIF3L1-201ENST00000359683 C5orf17Q8NAS9 161 aa9.17□□□□□ -0.94
NIF3L1-201ENST00000359683 OR8A1Q8NGG7 326 aa9.17□□□□□ -0.94
NIF3L1-201ENST00000359683 TXNDC17Q9BRA2 123 aa9.17□□□□□ -0.94
NIF3L1-201ENST00000359683 EPDR1Q9UM22 224 aa9.17□□□□□ -0.94
NIF3L1-201ENST00000359683 AGRNO00468 2067 aa9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 DIRC3C9JPN6 131 aa9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 H3BMM0 161 aa9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 IFNA1P01562 189 aa9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 SLC25A5P05141 298 aaKnown RBP9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 BCL2P10415 239 aa9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 HLA-DRB4P13762 266 aa9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 TAGLN2P37802 199 aaKnown RBP9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 ATP5G3P48201 142 aa9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 ACTL10Q5JWF8 245 aa9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 EBLN2Q6P2I7 272 aa9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 CMTM2Q8TAZ6 248 aa9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 HLA-DRB4X5D2U9 266 aa9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 LOC102723971A0A1B0GUV8 181 aa9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 RBFOX3A6NFN3 312 aa9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 A8MZ25 164 aa9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 PRB2P02812 416 aaPredicted RBP9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 PRB4P10163 310 aaPredicted RBP9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 HAGHQ16775 308 aa9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 CLUHP3Q96NS8 147 aa9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 TCEAL7Q9BRU2 100 aa9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 VAX2Q9UIW0 290 aa9.16□□□□□ -0.94
NIF3L1-201ENST00000359683 RBAKDNA6NC62 111 aa9.15□□□□□ -0.94
NIF3L1-201ENST00000359683 A8MTW9 85 aa9.15□□□□□ -0.94
NIF3L1-201ENST00000359683 C11orf94C9JXX5 98 aa9.15□□□□□ -0.94
NIF3L1-201ENST00000359683 K7EIL1 84 aa9.15□□□□□ -0.94
NIF3L1-201ENST00000359683 DUSP14O95147 198 aaKnown RBP9.15□□□□□ -0.94
NIF3L1-201ENST00000359683 TCRAP04437 139 aa9.15□□□□□ -0.94
NIF3L1-201ENST00000359683 ZNF705DP0CH99 300 aaPredicted RBP9.15□□□□□ -0.94
NIF3L1-201ENST00000359683 ZNF705BP0CI00 300 aaPredicted RBP9.15□□□□□ -0.94
NIF3L1-201ENST00000359683 IGHV4-30-4P0DP06 118 aa9.15□□□□□ -0.94
NIF3L1-201ENST00000359683 GNG5P63218 68 aa9.15□□□□□ -0.94
NIF3L1-201ENST00000359683 ZNF506Q5JVG8 444 aa9.15□□□□□ -0.94
NIF3L1-201ENST00000359683 OR10J6PQ8NGY7 276 aa9.15□□□□□ -0.94
NIF3L1-201ENST00000359683 HIST1H2BAQ96A08 127 aa9.15□□□□□ -0.94
NIF3L1-201ENST00000359683 FAM210AQ96ND0 272 aa9.15□□□□□ -0.94
NIF3L1-201ENST00000359683 RARRES2Q99969 163 aa9.15□□□□□ -0.94
NIF3L1-201ENST00000359683 SRD5A3Q9H8P0 318 aa9.15□□□□□ -0.94
NIF3L1-201ENST00000359683 SERTM2A0A1B0GWG4 89 aa9.14□□□□□ -0.95
NIF3L1-201ENST00000359683 NPIPB6E9PJ23 425 aa9.14□□□□□ -0.95
NIF3L1-201ENST00000359683 CNN1P51911 297 aaKnown RBP9.14□□□□□ -0.95
NIF3L1-201ENST00000359683 MEF2BQ02080 365 aaPredicted RBP9.14□□□□□ -0.95
NIF3L1-201ENST00000359683 HIST1H1AQ02539 215 aaPredicted RBP9.14□□□□□ -0.95
NIF3L1-201ENST00000359683 LINC00322Q6ZN03 302 aaPredicted RBP9.14□□□□□ -0.95
NIF3L1-201ENST00000359683 C9orf47Q6ZRZ4 202 aa9.14□□□□□ -0.95
NIF3L1-201ENST00000359683 TRPT1Q86TN4 253 aaKnown RBP9.14□□□□□ -0.95
NIF3L1-201ENST00000359683 STHQ8IWL8 128 aa9.14□□□□□ -0.95
NIF3L1-201ENST00000359683 ATG101Q9BSB4 218 aa9.14□□□□□ -0.95
NIF3L1-201ENST00000359683 AGPAT4-IT1Q9H0P7 198 aa9.14□□□□□ -0.95
NIF3L1-201ENST00000359683 IGKV2-40A0A087WW87 121 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-201ENST00000359683 RBMY1BA6NDE4 496 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-201ENST00000359683 RBMY1EA6NEQ0 496 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-201ENST00000359683 F6UZH7 168 aa9.13□□□□□ -0.95
NIF3L1-201ENST00000359683 PEX7O00628 323 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms