RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 TAS2R60P59551 318 aa10.53□□□□□ -0.72
PDLIM5-203ENST00000359265 ADIRFQ15847 76 aa10.53□□□□□ -0.72
PDLIM5-203ENST00000359265 C8orf86Q6ZUL3 223 aa10.53□□□□□ -0.72
PDLIM5-203ENST00000359265 C11orf44Q8N8P7 122 aa10.53□□□□□ -0.72
PDLIM5-203ENST00000359265 CITED2Q99967 270 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-203ENST00000359265 ZNF331Q9NQX6 463 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-203ENST00000359265 PEMTQ9UBM1 199 aa10.53□□□□□ -0.72
PDLIM5-203ENST00000359265 PRELID1Q9Y255 219 aa10.53□□□□□ -0.72
PDLIM5-203ENST00000359265 LY96Q9Y6Y9 160 aa10.53□□□□□ -0.72
PDLIM5-203ENST00000359265 K7EQM0 130 aa10.52□□□□□ -0.73
PDLIM5-203ENST00000359265 M0QZ24 198 aa10.52□□□□□ -0.73
PDLIM5-203ENST00000359265 GNG4P50150 75 aa10.52□□□□□ -0.73
PDLIM5-203ENST00000359265 UBE2G1P62253 170 aa10.52□□□□□ -0.73
PDLIM5-203ENST00000359265 RPL23P62829 140 aaKnown RBP10.52□□□□□ -0.73
PDLIM5-203ENST00000359265 KLF5Q13887 457 aaPredicted RBP10.52□□□□□ -0.73
PDLIM5-203ENST00000359265 CENPWQ5EE01 88 aa10.52□□□□□ -0.73
PDLIM5-203ENST00000359265 ARL6IP6Q8N6S5 226 aa10.52□□□□□ -0.73
PDLIM5-203ENST00000359265 C3orf56Q8N813 242 aa10.52□□□□□ -0.73
PDLIM5-203ENST00000359265 RPS10P5Q9NQ39 176 aa10.52□□□□□ -0.73
PDLIM5-203ENST00000359265 TRBV20OR9-2A0A075B6H5 130 aa10.51□□□□□ -0.73
PDLIM5-203ENST00000359265 SERTM2A0A1B0GWG4 89 aa10.51□□□□□ -0.73
PDLIM5-203ENST00000359265 A0A1W2PRX2 142 aa10.51□□□□□ -0.73
PDLIM5-203ENST00000359265 TMEM183BQ1AE95 376 aa10.51□□□□□ -0.73
PDLIM5-203ENST00000359265 FMC1Q96HJ9 113 aa10.51□□□□□ -0.73
PDLIM5-203ENST00000359265 KRTAP17-1Q9BYP8 105 aa10.51□□□□□ -0.73
PDLIM5-203ENST00000359265 CLEC5AQ9NY25 188 aa10.51□□□□□ -0.73
PDLIM5-203ENST00000359265 C2orf70A6NJV1 201 aa10.5□□□□□ -0.73
PDLIM5-203ENST00000359265 FHL3Q13643 280 aa10.5□□□□□ -0.73
PDLIM5-203ENST00000359265 SAMD13Q5VXD3 122 aa10.5□□□□□ -0.73
PDLIM5-203ENST00000359265 GOLT1AQ6ZVE7 132 aa10.5□□□□□ -0.73
PDLIM5-203ENST00000359265 TCF24Q7RTU0 167 aa10.5□□□□□ -0.73
PDLIM5-203ENST00000359265 LINC01551Q86U37 167 aa10.5□□□□□ -0.73
PDLIM5-203ENST00000359265 NDUFA11Q86Y39 141 aa10.5□□□□□ -0.73
PDLIM5-203ENST00000359265 MRPL53Q96EL3 112 aaKnown RBP10.5□□□□□ -0.73
PDLIM5-203ENST00000359265 IGF2BP2-AS1Q96M15 143 aa10.5□□□□□ -0.73
PDLIM5-203ENST00000359265 KLF12Q9Y4X4 402 aa10.5□□□□□ -0.73
PDLIM5-203ENST00000359265 A0A087WWC5 75 aa10.49□□□□□ -0.73
PDLIM5-203ENST00000359265 TRBV6-1A0A0K0K1D8 114 aa10.49□□□□□ -0.73
PDLIM5-203ENST00000359265 FBLL1A6NHQ2 334 aaKnown RBP10.49□□□□□ -0.73
PDLIM5-203ENST00000359265 DIRC3C9JPN6 131 aa10.49□□□□□ -0.73
PDLIM5-203ENST00000359265 M0R3E3 92 aa10.49□□□□□ -0.73
PDLIM5-203ENST00000359265 CCL24O00175 119 aa10.49□□□□□ -0.73
PDLIM5-203ENST00000359265 ISLRO14498 428 aa10.49□□□□□ -0.73
PDLIM5-203ENST00000359265 EDN2P20800 178 aa10.49□□□□□ -0.73
PDLIM5-203ENST00000359265 RPL11P62913 178 aaKnown RBP10.49□□□□□ -0.73
PDLIM5-203ENST00000359265 TMEM75Q8N9X5 138 aa10.49□□□□□ -0.73
PDLIM5-203ENST00000359265 OR9G4Q8NGQ1 327 aa10.49□□□□□ -0.73
PDLIM5-203ENST00000359265 RAX2Q96IS3 184 aa10.49□□□□□ -0.73
PDLIM5-203ENST00000359265 C16orf92Q96LL3 132 aa10.49□□□□□ -0.73
PDLIM5-203ENST00000359265 DUX3Q96PT4 197 aa10.49□□□□□ -0.73
PDLIM5-203ENST00000359265 NRN1Q9NPD7 142 aa10.49□□□□□ -0.73
PDLIM5-203ENST00000359265 TRAV34A0A0B4J273 112 aa10.48□□□□□ -0.73
PDLIM5-203ENST00000359265 PGPEP1LA6NFU8 196 aa10.48□□□□□ -0.73
PDLIM5-203ENST00000359265 MT-ND4LP03901 98 aa10.48□□□□□ -0.73
PDLIM5-203ENST00000359265 CBLN1P23435 193 aa10.48□□□□□ -0.73
PDLIM5-203ENST00000359265 BTN1A1Q13410 526 aa10.48□□□□□ -0.73
PDLIM5-203ENST00000359265 Q86TA4 180 aa10.48□□□□□ -0.73
PDLIM5-203ENST00000359265 BAGE2Q86Y30 109 aa10.48□□□□□ -0.73
PDLIM5-203ENST00000359265 OCC1Q8TAD7 63 aa10.48□□□□□ -0.73
PDLIM5-203ENST00000359265 ISOC2Q96AB3 205 aa10.48□□□□□ -0.73
PDLIM5-203ENST00000359265 SMIM12Q96EX1 92 aa10.48□□□□□ -0.73
PDLIM5-203ENST00000359265 LINC00479Q96M42 142 aa10.48□□□□□ -0.73
PDLIM5-203ENST00000359265 SMCO4Q9NRQ5 59 aa10.48□□□□□ -0.73
PDLIM5-203ENST00000359265 VWFP04275 2813 aa10.48□□□□□ -0.73
PDLIM5-203ENST00000359265 TRAV8-2A0A0B4J237 113 aa10.47□□□□□ -0.73
PDLIM5-203ENST00000359265 TSPAN4O14817 238 aa10.47□□□□□ -0.73
PDLIM5-203ENST00000359265 FOLR2P14207 255 aa10.47□□□□□ -0.73
PDLIM5-203ENST00000359265 HLA-DMBP28068 263 aa10.47□□□□□ -0.73
PDLIM5-203ENST00000359265 FLI1Q01543 452 aaPredicted RBP10.47□□□□□ -0.73
PDLIM5-203ENST00000359265 RNF212Q495C1 297 aa10.47□□□□□ -0.73
PDLIM5-203ENST00000359265 IGFL4Q6B9Z1 124 aa10.47□□□□□ -0.73
PDLIM5-203ENST00000359265 DLX4Q92988 240 aaPredicted RBP10.47□□□□□ -0.73
PDLIM5-203ENST00000359265 CTDSP1Q9GZU7 261 aa10.47□□□□□ -0.73
PDLIM5-203ENST00000359265 AURKAIP1Q9NWT8 199 aaPredicted RBP10.47□□□□□ -0.73
PDLIM5-203ENST00000359265 DNASE2O00115 360 aaPredicted RBP10.46□□□□□ -0.73
PDLIM5-203ENST00000359265 SOCS3O14543 225 aa10.46□□□□□ -0.73
PDLIM5-203ENST00000359265 PPP1R2P9O14990 202 aa10.46□□□□□ -0.73
PDLIM5-203ENST00000359265 MGST1P10620 155 aaKnown RBP10.46□□□□□ -0.73
PDLIM5-203ENST00000359265 PSG3Q16557 428 aa10.46□□□□□ -0.73
PDLIM5-203ENST00000359265 NSUN5P1Q3KNT7 163 aa10.46□□□□□ -0.73
PDLIM5-203ENST00000359265 LCN12Q6JVE5 192 aa10.46□□□□□ -0.73
PDLIM5-203ENST00000359265 TMEM88Q6PEY1 159 aa10.46□□□□□ -0.73
PDLIM5-203ENST00000359265 CBLN2Q8IUK8 224 aa10.46□□□□□ -0.73
PDLIM5-203ENST00000359265 RNF182Q8N6D2 247 aa10.46□□□□□ -0.73
PDLIM5-203ENST00000359265 ANAPC16Q96DE5 110 aa10.46□□□□□ -0.73
PDLIM5-203ENST00000359265 BIN3Q9NQY0 253 aa10.46□□□□□ -0.73
PDLIM5-203ENST00000359265 MLXQ9UH92 298 aa10.46□□□□□ -0.73
PDLIM5-203ENST00000359265 IGKV3-7A0A075B6H7 116 aa10.45□□□□□ -0.74
PDLIM5-203ENST00000359265 IGKV2-40A0A087WW87 121 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-203ENST00000359265 RBAKDNA6NC62 111 aa10.45□□□□□ -0.74
PDLIM5-203ENST00000359265 ADARB2-AS1A8MUL3 147 aa10.45□□□□□ -0.74
PDLIM5-203ENST00000359265 H7BYZ3 331 aa10.45□□□□□ -0.74
PDLIM5-203ENST00000359265 K7EN84 100 aa10.45□□□□□ -0.74
PDLIM5-203ENST00000359265 GCGP01275 180 aa10.45□□□□□ -0.74
PDLIM5-203ENST00000359265 LTAP01374 205 aa10.45□□□□□ -0.74
PDLIM5-203ENST00000359265 IGKV2D-40P01614 121 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-203ENST00000359265 IGLV2-11P01706 119 aa10.45□□□□□ -0.74
PDLIM5-203ENST00000359265 IGLV2-8P01709 118 aa10.45□□□□□ -0.74
PDLIM5-203ENST00000359265 ID1P41134 155 aa10.45□□□□□ -0.74
PDLIM5-203ENST00000359265 KRTAP10-3P60369 221 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms